Gchil1665.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1665.t1
Unique Name	Gchil1665.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	277

Homology

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BLAST of Gchil1665.t1 vs. uniprot
Match: A0A2V3IVZ1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ1_9FLOR)

HSP 1 Score: 354 bits (909), Expect = 1.720e-120
Identity = 185/278 (66.55%), Postives = 231/278 (83.09%), Query Frame = 0

Query:    1 MGQEQSSETPGGASSIPEGERIHFVAGTGNRDNERGEAEKLLERSRSLPIPQPLLPPAPPEGVSSALHGAQMMHELRSRIGDLISSAEEKGFLPSSSDNKLHPSRQSTELSACSNDSADMGRDE--IEQIIGKADEKCSSVDEFKPTTEADVRAEQERWARLGLDYEAVKTMMEACTGGKQIKQTIDRQKKIMSLIVTAHDKSIRLKQAMNANNHQARRTTRAIESLDKLNVTLSEVQDSLESAVATANILGASHFAHDEEMCSFKTFLKHNPPAFPE 276
            MGQEQSSE  GG + IPEGE +HFV GTG+ ++ RGEAEKLL++SRSLP+PQPLL P P E VSSAL GAQMM+ELRSRIG+LIS+AEEKG LPSS + +   S  S EL+A  N     G D+  +++IIGK  +K SSVDEF   +EAD+RAEQE+WARLGLDYEAVK+M++ACT GK++K+ +  QK++M+LIVT ++KS+RLK+AM+ANN+QAR+TT+AIE LDK+NV+LSEVQ+SLESAVATANILGASHFAHD+EMCSFK FLK++PP  PE
Sbjct:    1 MGQEQSSEQAGGLA-IPEGEGVHFVVGTGSAESGRGEAEKLLDQSRSLPVPQPLLRPPPREDVSSALQGAQMMYELRSRIGELISTAEEKGLLPSSGEKQPSSSHGSAELTASFNTGDPAGEDDDRVDKIIGKEGQKQSSVDEFVLHSEADIRAEQEKWARLGLDYEAVKSMVDACTSGKEVKELLHNQKELMALIVTVYEKSVRLKEAMDANNYQARKTTKAIEGLDKINVSLSEVQESLESAVATANILGASHFAHDDEMCSFKNFLKYHPPRAPE 277

[Close]

BLAST of Gchil1665.t1 vs. uniprot
Match: R7Q5F0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5F0_CHOCR)

HSP 1 Score: 177 bits (450), Expect = 7.010e-51
Identity = 118/292 (40.41%), Postives = 163/292 (55.82%), Query Frame = 0

Query:    1 MGQEQSSETPGGASSIPEGER---IHFVAGTGNRDNERGEAEKL---LERSRSLPIPQPLLPPAP-PEGVSSALHGAQMMHELRSRIGDLISSAEE-----------KGFLPSSSDNKLHPSRQSTELSACSNDSADMGRDEIEQIIGKADEKCSSVDEFKPTTEADVRAEQERWARLGLDYEAVKTMMEACTGGKQIKQTIDRQKKIMSLIVTAHDKSIRLKQAMNANNHQARRTTRAIESLDKLNVTLSEVQDSLESAVATANILGASHFAHDEEMCSFKTFLKHNPPAF 274
            MGQEQS     G  ++P   +   +H V GTG          KL   + +S SL +PQ +LPP    + + SAL G  +MHEL      L+   EE           +G   S S +  H +  +   S  SN   D GR E          + +S+D+       D RAEQ RWARLG+D   V  ++E CTGG ++   ++RQ  ++  I+ A +KS+RL  AM  +   A+RTT A+E LD++++ LS+VQD+LESAVATANILGASHF+HD+EMCSFK FL+HNPP +
Sbjct:    1 MGQEQSI----GGGNVPASSKDAGVHRVEGTGQSATSSQPTTKLDQVVAKSSSLNLPQQILPPPRVKDEMPSALQGTLVMHELNRVFHSLLMGVEETPNSRVQSTTLEGTEASGSTDG-HGTAGTPGQSDGSNVDGD-GRKEEGHAGNNVLPERTSIDDLTRELSEDSRAEQNRWARLGIDEATVSAVLEQCTGGPKMASVLNRQALLLQQIMAAKEKSVRLNAAMEKHGVAAKRTTMALERLDRIHIALSDVQDNLESAVATANILGASHFSHDDEMCSFKNFLRHNPPKY 286

The following BLAST results are available for this feature:

BLAST of Gchil1665.t1 vs. uniprot

BLAST of Gchil1665.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IVZ1_9FLOR	1.720e-120	66.55	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q5F0_CHOCR	7.010e-51	40.41	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004403_pilon	contig	tig00004403_pilon:1440167..1440997 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1665.t1	Gchil1665.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004403_pilon 1440167..1440997 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1665.t1 ID=Gchil1665.t1|Name=Gchil1665.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=277bp
MGQEQSSETPGGASSIPEGERIHFVAGTGNRDNERGEAEKLLERSRSLPI
PQPLLPPAPPEGVSSALHGAQMMHELRSRIGDLISSAEEKGFLPSSSDNK
LHPSRQSTELSACSNDSADMGRDEIEQIIGKADEKCSSVDEFKPTTEADV
RAEQERWARLGLDYEAVKTMMEACTGGKQIKQTIDRQKKIMSLIVTAHDK
SIRLKQAMNANNHQARRTTRAIESLDKLNVTLSEVQDSLESAVATANILG
ASHFAHDEEMCSFKTFLKHNPPAFPE*