Gchil1663.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1663.t1
Unique NameGchil1663.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length295
Homology
[Close]
BLAST of Gchil1663.t1 vs. uniprot
Match: A0A2V3IVZ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ7_9FLOR)

HSP 1 Score: 393 bits (1009), Expect = 3.740e-135
Identity = 194/294 (65.99%), Postives = 228/294 (77.55%), Query Frame = 0 
Query:    1 MAFIVSTSLPFRQNTAAKSTSRPRTTPFATATVPQSQPSPLPYNGSAASKPHKKASAHVVDSRVATRVEAHHWVVVSNSSLRIFERAAVAQADLAHQVDARTHSGALHRWLLRETEDPTHLFTKPSLSKSEVRYVVMEAFDRHDDSIENQFIMRRWLSAVERAGPLIDTFQIQTLHYENVFTSKVHDVHFDPYHNIVVMESINVDLTKDGAVDHVYDALRRSAERSVTTGECLEFCVLHAPNEHGFFKTIEVFKNEAALISHMSGTDVSTVQEITPYLIQGNRNRQTFKPVVFS 294
            MAFI +T L  RQ+T    TS  R +PFATA  P    +P     S  +KPHKKA+AHV+D  +ATRVEAHHW+ V++   R+FE AAVAQAD A QVDARTHSGALHRW+LRETEDP H+F  P L   E RYVVMEAF R + S ENQ +MRRWLSAVER GPL+D   IQTLHYENVFTSKVH+V FDP+HNIVVMESINVD  K+ A++ V +AL RSAE+SV+ GECLEFCVLHAPNEH FFKTIE++K+  AL+SHM+ TDV T +EI PYLIQGNR RQTFKP++F+
Sbjct:    1 MAFITTTPLLHRQSTPNTLTSCSRKSPFATAATPSPASTPNVQRQST-TKPHKKAAAHVIDFAIATRVEAHHWIAVNSPGARLFEHAAVAQADAARQVDARTHSGALHRWVLRETEDPAHIFLNPELPNHEARYVVMEAFSRDEPSFENQLVMRRWLSAVERVGPLVDAVDIQTLHYENVFTSKVHNVQFDPHHNIVVMESINVDTAKEKAMERVVEALERSAEKSVSAGECLEFCVLHAPNEHAFFKTIEIYKDVEALMSHMNATDVVTSEEIKPYLIQGNRKRQTFKPIIFT 293
[Close]
BLAST of Gchil1663.t1 vs. uniprot
Match: R7Q8E7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8E7_CHOCR)

HSP 1 Score: 259 bits (663), Expect = 1.520e-82
Identity = 130/244 (53.28%), Postives = 166/244 (68.03%), Query Frame = 0 
Query:   51 PHKKASAHVVDSRVATRVEAHHWVVVSNSSLRIFERAAVAQADLAHQVDARTHSGALHRWLLRETEDPTHLFTKPSLSKSEVRYVVMEAFDRHDDSIENQFIMRRWLSAVERAGPLIDTFQIQTLHYENVFTSKVHDVHFDPYHNIVVMESINVDLTKDGAVDHVYDALRRSAERSVTTGECLEFCVLHAPNEHGFFKTIEVFKNEAALISHMSGTDVSTVQEITPYLIQGNRNRQTFKPVVFS 294
            P  +  A V+DSRVA+ +E+HHW+VV+N   R+FERAAVAQAD+  QV+ R   GALHRW+LRE +DP  L      S  + RYVVME F +   S E+  IMRRWLSAVER GP I    I+T +YEN+FTSK+HDV FDP  NIVV+ES+NVD+ +    + V D LR +AE SV+ G CLEFCVLH P +HGFFKTI+V+KN  AL  HM   D    + +   +   +R+R TF+PVVF+
Sbjct:   59 PRPRTRAPVIDSRVASVLESHHWIVVNNQGRRMFERAAVAQADMTRQVERRAQRGALHRWVLREVQDPIGLGPAAPFSPKDSRYVVMETF-KATASAEDPGIMRRWLSAVERVGPSIHAVDIRTRNYENLFTSKLHDVKFDPNENIVVVESVNVDMARPHNAEEVVDILRSTAEASVSAGTCLEFCVLHKPGKHGFFKTIQVYKNVDALRQHMDSVDQVYTRRVQGRISDSHRSRHTFRPVVFA 301
The following BLAST results are available for this feature:
BLAST of Gchil1663.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IVZ7_9FLOR3.740e-13565.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8E7_CHOCR1.520e-8253.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 197..292
e-value: 6.2E-7
score: 31.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..53
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 206..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1435755..1436639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1663.t1Gchil1663.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1435755..1436639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1663.t1 ID=Gchil1663.t1|Name=Gchil1663.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=295bp
MAFIVSTSLPFRQNTAAKSTSRPRTTPFATATVPQSQPSPLPYNGSAASK
PHKKASAHVVDSRVATRVEAHHWVVVSNSSLRIFERAAVAQADLAHQVDA
RTHSGALHRWLLRETEDPTHLFTKPSLSKSEVRYVVMEAFDRHDDSIENQ
FIMRRWLSAVERAGPLIDTFQIQTLHYENVFTSKVHDVHFDPYHNIVVME
SINVDLTKDGAVDHVYDALRRSAERSVTTGECLEFCVLHAPNEHGFFKTI
EVFKNEAALISHMSGTDVSTVQEITPYLIQGNRNRQTFKPVVFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel