Gchil1652.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1652.t1
Unique NameGchil1652.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length339
Homology
BLAST of Gchil1652.t1 vs. uniprot
Match: A0A2V3IW23_9FLOR (Putative endonuclease lcl3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW23_9FLOR)

HSP 1 Score: 424 bits (1089), Expect = 1.730e-145
Identity = 212/338 (62.72%), Postives = 261/338 (77.22%), Query Frame = 0
Query:    1 MSSDSPKRPPLDFLSVLGATARAASGRVQKLPQHASVARRKVHKGAISACKRLPLNLSDDYIIGAVDVFASLAVLYVTLPAAVRSVRRFPTAAQIPSNLINNRSMLHGAVVAVRDGDNLRVRHSPFLYRIFNRYTLPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKLYKKVEQRARVKKVGMWSENNVTTPKQYKEAVRAGGNHLKKLLKKESNKPKGSEASQNGAATSPRSLESEPIDAMRLFENVYNFLKRFR 338
            MSS+S KRP  + L++L     A S  ++ LP++A  AR+ V   AIS  KRLPL +SDDY+ GAVD+F SLAVLYVT PA  RSVRRFPTA+ IPSNLINNRS+LHG VVAVRDGD LRVRH+P L+R+ N Y LP  T +SQTTINIRLA VDAPECASFG++GQKYGP+AR WL+ Y LGRKVAFRVHAIDQYKR +ATVYRKP+N ILR L LG++N+GLELTR+GYAT+YTG+GA+YG ERL +LY K+EQRAR KK+GMWSE NVTTP Q+K  VRAG   +K+L++K + K K      + A    +  ++ P+  +R FE+++ FLKRFR
Sbjct:   28 MSSESSKRPSTELLNLLKKNLEATSIFIRGLPRNALSARKGVQNAAISVSKRLPLKVSDDYVRGAVDIFVSLAVLYVTTPAMARSVRRFPTASHIPSNLINNRSVLHGMVVAVRDGDTLRVRHAPLLFRLLNAYKLPSNTKLSQTTINIRLAAVDAPECASFGHRGQKYGPIAREWLREYTLGRKVAFRVHAIDQYKRALATVYRKPKNPILRVLGLGKRNVGLELTRAGYATLYTGSGAEYGGERLKRLYMKIEQRARQKKLGMWSEKNVTTPMQFKREVRAGTTGVKRLIEKNTVKRKQESRVDSEAEKGGQLSQAVPVSVIRFFEDLHMFLKRFR 365          
BLAST of Gchil1652.t1 vs. uniprot
Match: R7Q707_CHOCR (TNase-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q707_CHOCR)

HSP 1 Score: 236 bits (603), Expect = 3.060e-72
Identity = 131/289 (45.33%), Postives = 188/289 (65.05%), Query Frame = 0
Query:   58 SDDYIIGAVDVFASLAVLYVTLPAAVRSVRRFPTAAQIPSNLINNRSMLHGAVVAVRDGDNLRVRHSPFLYRIFNRYTLPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKLYKKVEQRARVKKVGMWSE-NNVTTPKQYKEAVRAGGNHLKKLLKKESNKPKGSEASQNGAA--TSPRSLESEPIDAM-----RLFENVYNFLKRFR 338
            S+DY+ G V++ A+ A + V + A+ + + RF TA  IP +LI    +LHG VV+VRDGD +R+RH+PFL R+     +PKG  +S++TI +RL+ VDAPE +      QKYG VA+ WL+ YA+GR+V  ++H+ D+Y+RVVATVYRK  N +LRTL LG+KN+ +ELTR+GYAT+Y   GAQYGSE++ KLY  VE  AR KKVGMW++     +P  YK+A+R+G   ++KL      K     A +N  +   SP   + +  D++     R     Y+FLKR+R
Sbjct:   67 SNDYVRGGVEMLATAAAISVVVYASYKGLARFNTADDIPGSLIRQGRVLHGYVVSVRDGDGIRMRHTPFLRRLMQDVAVPKGKKLSESTIAVRLSAVDAPESS------QKYGKVAKEWLREYAVGRQVRVQLHSTDRYRRVVATVYRKHNNPLLRTLGLGQKNLSMELTRAGYATLYDRGGAQYGSEKMKKLYMAVEASARKKKVGMWADPKGYVSPMDYKDALRSGV--MRKLNGPRIVKKTTGTAEKNAMSKPNSPVEGQGQEHDSLLGSLYRFAAMSYHFLKRYR 347          
BLAST of Gchil1652.t1 vs. uniprot
Match: M2Y7G6_GALSU (TNase-like domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7G6_GALSU)

HSP 1 Score: 164 bits (414), Expect = 4.000e-45
Identity = 93/219 (42.47%), Postives = 131/219 (59.82%), Query Frame = 0
Query:   70 ASLAVLYVTLPAAVRSVRRFPTAAQIPSNLINNRSMLHGAVVAVRDGDNLRVRHSPFLYRIFN--RYTLPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKLYKKVEQRARVKKVGMWSENN--VTTPKQYKEAVRAG 284
            AS   L  T       VRR+ TA  IP+++    S + G VV+V DGDN+R+ H PFL+R F   R+ + K   +S+ TI++RLAGVDAPECA FG  GQ+ G  A+ WL+NY   R V  ++H++DQY R V TV+ +   L L+      KN+  EL + G+A VY G GA+Y    +L+  +  E  AR +K GMWS  N  V +P++YK A++ G
Sbjct:   19 ASFGYLSATTKLLYMGVRRYKTAKDIPNSMFQRGSKIKGVVVSVGDGDNIRIFHRPFLFRFFGIGRHPVLKK-RLSEETISVRLAGVDAPECAHFGAPGQEGGEQAKKWLRNYLKDRAVTVQLHSLDQYSRAVCTVHVRKGILRLK------KNVSYELVKVGHAVVYRGFGAEYNG--ILRKLENAETEARKRKRGMWSVRNKPVISPQEYKRALKEG 228          
BLAST of Gchil1652.t1 vs. uniprot
Match: A0A7S1EQF4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQF4_9RHOD)

HSP 1 Score: 155 bits (392), Expect = 8.900e-41
Identity = 103/271 (38.01%), Postives = 153/271 (56.46%), Query Frame = 0
Query:   40 RKVHKGAISACKRLPLNL-SDDYIIGAVDVFASLAVLYVTLPAAVRSVRRFPTAAQIPSNLINNRSMLHGAVVAVRDGDNLRVRHSPFLYRIFNRYTLPKGTN----ISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQY-GSERLLKLYKKVEQRARVKKVGMWSE--NNVTTPKQYKEAVRAGGNHLKKLLK--KESNKPK 300
            RKV K      K +   + +D++  GA      +A +     A  R + +  +A  I  +++N R+ L G +V V DGDN R+ H+P L RIFN +      N    +S+TTI++RLAGVDAPECA FG  GQK+GP A  WL+N   G++V  +V   DQY+RVVAT + KP      +    ++++  EL R+GY  VY G  A Y G+ + L+  +++ Q+AR    GMW +  + V  P+QYK+A++ G    +KLL   +ES K K
Sbjct:   79 RKVSKMQRDTSKFIKSKIPNDEFSKGAGYALVGVAAIAFVSVALYRGLYQVKSAEYITQSMLNRRAKLSGVIVKVGDGDNFRMLHTPSLRRIFNWFKRNSVANETRKLSETTIHVRLAGVDAPECAHFGQVGQKHGPEALEWLRNRIQGKRVTIQVLKRDQYERVVATAWVKP------SWWRRQQDVSYELVRAGYGVVYRGGTAVYNGALKRLESAERIAQKARR---GMWVDGVDAVVGPQQYKKALKLGLESAEKLLNATQESGKVK 340          
BLAST of Gchil1652.t1 vs. uniprot
Match: A0A1E3PYE0_LIPST (TNase-like domain-containing protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3PYE0_LIPST)

HSP 1 Score: 142 bits (359), Expect = 5.730e-37
Identity = 87/215 (40.47%), Postives = 124/215 (57.67%), Query Frame = 0
Query:   84 RSVRRFPTAAQIPSNLINNRSMLHGAVVAVRDGDNLRVRHSP---FL-YRIFNRYTLPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVY-TGAGAQYGSERLLKLYKKVEQRARVKKVGMWSENNVTT--PKQYKEAVRAGGNHLKKL 291
            R +RRFPTA  IP  L      L G VV V DGDN R+ H+P   F  +    R   P+   +S  TI++RL G+DAPEC S+G  GQ +GP ++NWL+ Y LGRKV  R++++DQY+R VA        ++  T   G+K++  E+ R+G+A VY +   A +GS +  + Y++ EQ AR  K GMW      T  P +YK  +R G  +L+ L
Sbjct:   55 RYLRRFPTALSIPQLLYAKGRTLSGRVVFVGDGDNFRLYHTPGGIFAGWDWLRRQPQPRRLKLSSETIHVRLCGIDAPECKSYGRPGQPFGPESKNWLRQYLLGRKVKIRLYSLDQYQRAVAKA-----TVLSWT---GQKDVSSEMLRAGWAIVYESNFQAAFGSTK--ETYQREEQYARDHKNGMWKYGKTLTESPAEYKRRMRLGPVNLRGL 259          
BLAST of Gchil1652.t1 vs. uniprot
Match: A0A7V5IAD4_9BACT (TNase-like domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5IAD4_9BACT)

HSP 1 Score: 143 bits (361), Expect = 1.360e-36
Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 0
Query:   86 VRRFPTAAQIPSNLINNRS----------MLHGAVVAVRDGDNLRVRHSPFLYRIFNRYT-------LPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKLYKKVEQRARVKKVGMWSEN 269
            V R+PTAA +P + +  R+           LHG VV V DGDN RV H+P+L R + R         LP   N+S  TI++RLAGVDAPECA FG  GQ++GP AR WL+   L + V   ++  D+Y R+VA V+R P  + L    L   N+ LE+ R+GYA VY GAGA YG   L +  +  E++A  +++GMW+ +
Sbjct:    3 VHRYPTAAHLPPHYLALRNPRTGKIDAGRQLHGLVVHVGDGDNFRVLHTPWLLRWWIRLRWRLSGGQLPYKGNLSSQTIHVRLAGVDAPECAHFGLAGQRFGPQARAWLQRTLLNQPVKLLLYQRDRYGRIVAHVWR-PRRIPLLGPLLPGLNVSLEMVRAGYAEVYRGAGACYG--HLREALELAERQAHKRRLGMWARS 200          
BLAST of Gchil1652.t1 vs. uniprot
Match: M1VJV3_CYAM1 (Similar to micrococcal nuclease, mitochondrial n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VJV3_CYAM1)

HSP 1 Score: 144 bits (362), Expect = 3.380e-35
Identity = 85/201 (42.29%), Postives = 119/201 (59.20%), Query Frame = 0
Query:   86 VRRFPTAAQIPSNLINNRS----------MLHGAVVAVRDGDNLRVRHSPFLYRIFNRYT-------LPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKLYKKVEQRARVKKVGMWSEN 269
            V R+PTAA +P + +  R+           LHG VV V DGDN RV H+P+L R + R         LP   N+S  TI++RLAGVDAPECA FG  GQ++GP AR WL+   L + V   ++  D+Y R+VA V+R P  + L    L   N+ LE+ R+GYA VY GAGA YG   L +  +  E++A+ +++GMW+ +
Sbjct:  207 VHRYPTAAHLPPHYLALRNPRTGKIDAGRQLHGLVVHVGDGDNFRVLHTPWLLRWWIRLRWRLSGGQLPYKGNLSSQTIHVRLAGVDAPECAHFGLAGQRFGPQARAWLQRTLLNQPVKLLLYQRDRYGRIVAHVWR-PRRIPLLGPLLPGLNVSLEMVRAGYAEVYRGAGACYG--HLREALELAERQAQKRRLGMWARS 404          
BLAST of Gchil1652.t1 vs. uniprot
Match: A0A1J5WV57_9MICR (SNase-domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WV57_9MICR)

HSP 1 Score: 136 bits (343), Expect = 4.880e-34
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 0
Query:   88 RFPTAAQIPSNLINNRSMLHGAVVAVRDGDNLRVRHSPFLYRIFNRYTLPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKLYKKVEQRARVKKVGMWSENNVTTPKQYKEAVR 282
            R+   +++P ++   R++LHG V +V DGD  R RH  F    F  + L   ++  + T+++RLAGVDAPE A FG  GQ +G  A+ WL++   GR+V    H  DQY R V +VY +P         L  KN+ LE+ +SG A VY G GA YG   +       E++AR  + GMW + +  +P +YK+A +
Sbjct:  135 RYRAVSELPESVFRRRTVLHGVVSSVGDGDGFRFRHVSF----FELFRLSSKSSGLKETLSVRLAGVDAPETAHFGLPGQPFGEEAKRWLRDEIQGRRVRIVPHLRDQYGRAVCSVYYRPF--------LFEKNLSLEIVKSGLAEVYVGKGAVYGG--IFASLLSAEKKARKSRTGMWQQRDYRSPGEYKQAAK 315          
BLAST of Gchil1652.t1 vs. uniprot
Match: A0A7J7INA9_9RHOD (Putative endonuclease lcl3 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INA9_9RHOD)

HSP 1 Score: 134 bits (336), Expect = 2.390e-33
Identity = 81/199 (40.70%), Postives = 117/199 (58.79%), Query Frame = 0
Query:   86 VRRFPTAAQIPSN---LINNRS-------MLHGAVVAVRDGDNLRVRHSPFLYRIFNRYT-------LPKGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKLYKKVEQRARVKKVGMWS 267
            V R+ TA  +P++   L + R+        L G VV V DGDN R+ H+P+L R + R+        LP    ++  TI++RLAG+DAPECA FG  GQ+YGP A+ WL+   L + V   ++  D++ RV+A V+R P  + L    L  +N+ LE+ R+GYA VY GAGA YG  R  K  +  EQRA  +++GMW+
Sbjct:   50 VHRYATADHLPAHYLALAHPRTGQPGVGRRLSGLVVHVGDGDNFRILHTPWLLRWWIRWRWQITGGQLPGRGTLASQTIHVRLAGIDAPECAHFGMLGQRYGPEAKAWLQRTLLNQPVRLELYQRDRFGRVIAHVWR-PFRIPLFGALLPGRNVSLEMVRAGYAEVYRGAGAIYG--RFQKALEAAEQRAIRRRLGMWA 245          
BLAST of Gchil1652.t1 vs. uniprot
Match: A0A6G1FTH3_9PEZI (Probable endonuclease LCL3 n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1FTH3_9PEZI)

HSP 1 Score: 133 bits (334), Expect = 5.010e-33
Identity = 87/225 (38.67%), Postives = 120/225 (53.33%), Query Frame = 0
Query:   84 RSVRRFPTAAQIPSNLINNRSMLHGAVVAVRDGDNLRVRHSPFLYRIFNRYTLP------KGTNISQTTINIRLAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVVATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGA-GAQYGSERLLKLYKKVEQRARVKKVGMWSENNV-----------TTPKQYKEAVRAGGNHLKK 290
            R +RR P A   P +    RS+  G V +V DGDN+R+ H+P   R+     LP      K   +S  TI+IRLAGVDAPECA FG   Q +G  AR WL +Y L R+V   V+  DQY+R+V TVY      + R  R  RK++GLE+ R G ATVY G  GA++G E     Y+  E  A+ + +G+W E +V            TP ++K+        ++K
Sbjct:   65 RYLRRIPNAGYFPPDQFRKRSVF-GKVTSVGDGDNVRIFHTPG-GRLAGWGWLPGRIVPTKSRELSSKTIHIRLAGVDAPECAHFGRTAQPFGDEARRWLASYLLHRRVRAHVYRRDQYERLVGTVY------VRRWFR--RKDVGLEMLRRGLATVYEGKYGAEFGGEE--GKYRGAEATAKARGIGLWKEPSVWKKMVGRAEKRETPMEFKKRTSPAAGQIRK 277          
The following BLAST results are available for this feature:
BLAST of Gchil1652.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IW23_9FLOR1.730e-14562.72Putative endonuclease lcl3 n=1 Tax=Gracilariopsis ... [more]
R7Q707_CHOCR3.060e-7245.33TNase-like domain-containing protein n=1 Tax=Chond... [more]
M2Y7G6_GALSU4.000e-4542.47TNase-like domain-containing protein n=1 Tax=Galdi... [more]
A0A7S1EQF4_9RHOD8.900e-4138.01Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1E3PYE0_LIPST5.730e-3740.47TNase-like domain-containing protein n=1 Tax=Lipom... [more]
A0A7V5IAD4_9BACT1.360e-3642.29TNase-like domain-containing protein n=1 Tax=bacte... [more]
M1VJV3_CYAM13.380e-3542.29Similar to micrococcal nuclease, mitochondrial n=1... [more]
A0A1J5WV57_9MICR4.880e-3437.44SNase-domain-containing protein n=1 Tax=Amphiambly... [more]
A0A7J7INA9_9RHOD2.390e-3340.70Putative endonuclease lcl3 n=1 Tax=Cyanidiococcus ... [more]
A0A6G1FTH3_9PEZI5.010e-3338.67Probable endonuclease LCL3 n=1 Tax=Eremomyces bila... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016071Staphylococcal nuclease (SNase-like), OB-foldSMARTSM00318SNASE_2coord: 104..268
e-value: 4.0E-21
score: 86.2
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPFAMPF00565SNasecoord: 148..268
e-value: 4.5E-20
score: 72.1
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPROSITEPS50830TNASE_3coord: 104..268
score: 29.177284
IPR035437SNase-like, OB-fold superfamilyGENE3D2.40.50.90coord: 100..276
e-value: 1.5E-31
score: 110.9
IPR035437SNase-like, OB-fold superfamilySUPERFAMILY50199Staphylococcal nucleasecoord: 103..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..317
NoneNo IPR availablePANTHERPTHR12302:SF3SERINE/THREONINE-PROTEIN KINASE 31coord: 91..280
NoneNo IPR availablePANTHERPTHR12302EBNA2 BINDING PROTEIN P100coord: 91..280
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..338
NoneNo IPR availableTMHMMTMhelixcoord: 61..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1408548..1409564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1652.t1Gchil1652.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1408548..1409564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1652.t1 ID=Gchil1652.t1|Name=Gchil1652.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=339bp
MSSDSPKRPPLDFLSVLGATARAASGRVQKLPQHASVARRKVHKGAISAC
KRLPLNLSDDYIIGAVDVFASLAVLYVTLPAAVRSVRRFPTAAQIPSNLI
NNRSMLHGAVVAVRDGDNLRVRHSPFLYRIFNRYTLPKGTNISQTTINIR
LAGVDAPECASFGNKGQKYGPVARNWLKNYALGRKVAFRVHAIDQYKRVV
ATVYRKPENLILRTLRLGRKNIGLELTRSGYATVYTGAGAQYGSERLLKL
YKKVEQRARVKKVGMWSENNVTTPKQYKEAVRAGGNHLKKLLKKESNKPK
GSEASQNGAATSPRSLESEPIDAMRLFENVYNFLKRFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016071Staphylococal_nuclease_OB-fold
IPR035437SNase_OB-fold_sf