Gchil1650.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil1650.t1 vs. uniprot
Match: R7Q1N9_CHOCR (RPOL4c domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1N9_CHOCR) HSP 1 Score: 137 bits (344), Expect = 3.630e-38 Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 0
Query: 34 IPPSEEDASTLKFSYEFTLEGHAQPLFISEVGHLLKVHVEKQERRLGDLNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKNFEVWL 165
+ +EDA+ L+F EF E QPLF +EV LLK+H EK + + N +L SL++ ERFGQ+ T+ +I VR QL+ V P+LH FEVAQLASLMPK+ +EAKAI+PSLAA YDDDV+++ILKN + WL
Sbjct: 33 VRSGDEDAAKLEFGAEFD-EQKGQPLFTAEVLQLLKLHKEKNQHVQVN-NRLLEPSLEHCERFGQIETTDAAIMVREQLQKVEPRLHPFEVAQLASLMPKDAEEAKAIIPSLAANYDDDVLNEILKNMDAWL 162
BLAST of Gchil1650.t1 vs. uniprot
Match: M1VIP7_CYAM1 (RNA polymerase II subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VIP7_CYAM1) HSP 1 Score: 89.4 bits (220), Expect = 8.500e-20 Identity = 54/124 (43.55%), Postives = 70/124 (56.45%), Query Frame = 0
Query: 38 EEDASTLKFSYEFTLEGHAQPLFISEVGHLLKV-HVEKQERRLGDLNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKN 160
EE+A LKF F H QPL I EV LL+ E L + KS Y ERF Q E + VR +LE +P+LH FE AQLA+L+P+ EAKAI+PSL + DDDV+ +L++
Sbjct: 8 EENAENLKFGELFGDNEHCQPLLICEVAELLRQKRAELPAELQSSLGPIFVKSEAYVERFNQFRSAEVAKVVRVRLER-HPELHPFERAQLANLLPETPAEAKAIIPSLKGKLDDDVLGQLLRD 130
BLAST of Gchil1650.t1 vs. uniprot
Match: A0A7M7RGR9_STRPU (RPOL4c domain-containing protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7RGR9_STRPU) HSP 1 Score: 88.6 bits (218), Expect = 1.980e-19 Identity = 55/128 (42.97%), Postives = 77/128 (60.16%), Query Frame = 0
Query: 38 EEDASTLKFSYEFTLEGHAQPLFISEVGHLL---KVHVEKQERRLGDLNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKNFE 162
EEDAS LKF F A+ L ISEV LL K E QE +L+ V K+L+Y RF + E VR L+ PKLH+FE+A LA+L P+ +EAKA++PSL R++DD ++++L+N +
Sbjct: 12 EEDASELKFPKVFE---QAETLLISEVQMLLQHRKQQNESQEEEQ-ELSEVFMKTLNYTGRFSRFKNRETIGDVRGLLQQQQPKLHKFELALLANLCPETAEEAKALIPSLEGRFEDDELTEVLENMQ 135
BLAST of Gchil1650.t1 vs. uniprot
Match: S4RJW7_PETMA (Polymerase (RNA) II (DNA directed) polypeptide D n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RJW7_PETMA) HSP 1 Score: 86.7 bits (213), Expect = 1.140e-18 Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 0
Query: 38 EEDASTLKFSYEFTLEGHAQPLFISEVGHLLKVHVEKQERRLGD---LNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKNFE 162
EEDAS L+F+ EF +A+ L ISEV H+L H ++Q D L+ + K+L+Y RF + K E +VR+ L + KLH+FE+A LA+L P+ +EAKA++PSL R++DD + IL + +
Sbjct: 15 EEDASQLQFAKEFE---NAETLLISEV-HMLLEHRKQQNESAEDEQELSELFMKTLNYTGRFSRFTKRETIASVRSLL--LQKKLHKFELASLANLCPETAEEAKALIPSLEGRFEDDELQQILDDIQ 136
BLAST of Gchil1650.t1 vs. uniprot
Match: UPI0014255839 (DNA-directed RNA polymerase II subunit RPB4-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255839) HSP 1 Score: 85.9 bits (211), Expect = 1.890e-18 Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = 0
Query: 38 EEDASTLKFSYEFTLEGHAQPLFISEVGHLL---KVHVEKQERRLGDLNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKNFE 162
EEDAS LKF EF A+ L ISEV LL K E QE +L+ V K+L Y ERF + E VR+ ++ +LH+FEVA LA+L P DEA+A+VPSL R+DD+ + ++++N +
Sbjct: 8 EEDASELKFPKEFE---QAETLLISEVRMLLEHRKTQNENQEEEQ-ELSEVFMKTLQYTERFSRFKNRETIADVRSLMK--QKQLHKFEVASLANLCPDTADEARALVPSLEGRFDDEDLQEMMENIQ 129
BLAST of Gchil1650.t1 vs. uniprot
Match: T1J3Q6_STRMM (RPOL4c domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J3Q6_STRMM) HSP 1 Score: 85.5 bits (210), Expect = 3.110e-18 Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 0
Query: 32 VTIPPSEEDASTLKFSYEFTLEGHAQPLFISEVGHLLKVHVEKQERRLGD---LNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKNFE 162
V +EEDAS L+F EF +A+ L ISEV H+L H + Q + L+ V K+L+Y +RF + E AVR+ L KLH+FE+AQLA+L P +EAKA+VPSL R+++D +S IL + +
Sbjct: 8 VQAEQTEEDASELQFPKEFE---NAETLLISEV-HMLLDHRKTQNESAEEEQELSDVFMKTLNYTQRFSRFKNRETISAVRSLL--TQKKLHKFELAQLANLCPDNPEEAKALVPSLEGRFEEDELSQILDDIQ 135
BLAST of Gchil1650.t1 vs. uniprot
Match: UPI000719D388 (DNA-directed RNA polymerase II subunit RPB4-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D388) HSP 1 Score: 85.1 bits (209), Expect = 4.380e-18 Identity = 54/135 (40.00%), Postives = 79/135 (58.52%), Query Frame = 0
Query: 32 VTIPPS--EEDASTLKFSYEFTLEGHAQPLFISEVGHLLKVHVEKQERRLGD--LNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKNFE 162
VT+P EEDAS+L+F EF +A+ L ISEV LL+ E + L+ V K+ +Y ERF + E AVR L+ KLH+FE+A +A+L P+ +EAKA++PSL R++DD + IL + +
Sbjct: 6 VTLPNDLIEEDASSLQFPKEFE---NAETLLISEVFMLLEHRKSNNENAEDEQELSDVFMKTFNYTERFSKFKNRETIAAVRKSLQ--EKKLHKFELASIANLCPENAEEAKALIPSLEGRFEDDELQQILDDIQ 135
BLAST of Gchil1650.t1 vs. uniprot
Match: UPI0006B09510 (DNA-directed RNA polymerase II subunit RPB4-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B09510) HSP 1 Score: 84.7 bits (208), Expect = 6.840e-18 Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 0
Query: 38 EEDASTLKFSYEFTLEGHAQPLFISEVGHLLKVHVEKQERRLGD---LNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKNFE 162
EEDAS L+F EF +A+ L ISEV H+L H ++Q + L+ V K+LDY ++F + E AVR+ L + KLH+FE+AQLA+L P+ +EAKA++PSL R++D+ + IL + +
Sbjct: 15 EEDASELQFPKEFE---NAETLLISEV-HMLLEHRKQQNESAEEEQELSEVFLKTLDYCQQFSRYKNRETIAAVRSLL--MQKKLHKFELAQLANLAPETPEEAKALIPSLEGRFEDEELRQILDDIQ 136
BLAST of Gchil1650.t1 vs. uniprot
Match: A0A293LJQ5_ORNER (RPOL4c domain-containing protein (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A293LJQ5_ORNER) HSP 1 Score: 84.3 bits (207), Expect = 9.170e-18 Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 0
Query: 34 IPPSEEDASTLKFSYEFTLEGHAQPLFISEVGHLL---KVHVEKQERRLGDLNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKN 160
I EEDAS L+F EF +A+ L ISEV LL K E E +L+ V K+L+Y +RF ++ E AVR L KLH+FE+AQLA+L P +EAKA++PSL R++DD + IL++
Sbjct: 12 IEQVEEDASELQFPKEFE---NAESLLISEVNMLLEHRKTQNENAEEEQ-ELSEVFTKTLNYCQRFSRIKNRETIAAVRNLL--TQKKLHKFELAQLANLCPDNPEEAKALIPSLEGRFEDDDLRQILED 135
BLAST of Gchil1650.t1 vs. uniprot
Match: A0A6G0V286_9BILA (RPOL4c domain-containing protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V286_9BILA) HSP 1 Score: 84.3 bits (207), Expect = 1.010e-17 Identity = 53/136 (38.97%), Postives = 80/136 (58.82%), Query Frame = 0
Query: 34 IPPS-------EEDASTLKFSYEFTLEGHAQPLFISEVGHLL--KVHVEKQERRLGDLNVVLRKSLDYAERFGQLAKTEQSIAVRAQLEAVNPKLHEFEVAQLASLMPKEVDEAKAIVPSLAARYDDDVISDILKN 160
+PPS EEDAS LKF EF EG L ISEV LL + +Q+ + D++ V K++DY R + + +VRA A N LH+FE+AQL +L P+ +EAKA++PSL ++ DD+ + ++L++
Sbjct: 7 LPPSGVSKDAQEEDASELKFPPEFDREG-CDALLISEVFLLLDHRRRQGEQKEEIEDISEVFLKTIDYCRRLSRFKTRDTIRSVRAIFTACN-NLHKFEIAQLINLCPENAEEAKALIPSLESKIDDEELDNLLRD 140 The following BLAST results are available for this feature:
BLAST of Gchil1650.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil1650.t1 ID=Gchil1650.t1|Name=Gchil1650.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=166bpback to top |