Gchil1639.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1639.t1
Unique NameGchil1639.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length315
Homology
BLAST of Gchil1639.t1 vs. uniprot
Match: A0A2V3IFK4_9FLOR (Alpha-tocopherol transfer protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK4_9FLOR)

HSP 1 Score: 352 bits (902), Expect = 2.990e-118
Identity = 160/306 (52.29%), Postives = 231/306 (75.49%), Query Frame = 0
Query:    6 AHDISHLQQNTPPPAGVSALLHAIRSLSAGNAGDELAHISRADLSTPFVCSAEEEHALVQQLRHAANQDGNQCVANASHFWLLAALRARKGDVKRAQQLMSNFLAWKRRLASSTDGDRCFRTTQKQLQSRFVFISGNADREARPVINVRMARHDPSTFSALDTVRTLATVLEWTVRTYPAAQTHGVIIVHDFSNLKFHNLDLRLPGEVKNAFTQAFPIRVAAILVCHPPFFLKGIIGIVTSIMGKKLRARIRAIDGKDKHILAEYLAQDQIMDDLHMDGTATWSSDQHSEWVERVGREKLAWPQVT 311
            AH I  L+ N  PP+G+++     RSL+  N+ DE+AH+++AD+STPF+ SAEEE  LV+ +R  A + G Q VA+A HFW+LAA+RARKGDV RA++L++NF++W++R+ S+ D       TQ QL+S F+F+SG  D+  RPV++++MA+HDPS+FSALDT+RTL+TVLEWT+RTYPAAQTHG++++HD S++  HNLDLR+PGE++ AF+Q+FP+RVA+I++CHPPFFLK I+G  +S M  KL+ARI  +   DK++L E      I+ DL + GTA W+ ++H EWV R+  +  AWP+ T
Sbjct:    6 AHTIERLEGNARPPSGIASFFSVFRSLARQNSKDEIAHVTKADISTPFIRSAEEETQLVESVRQRALESGRQSVADAEHFWVLAAVRARKGDVTRAEKLLANFISWRKRIESAADKQVRLDKTQSQLKSCFMFVSGTTDKAGRPVLHLKMAKHDPSSFSALDTIRTLSTVLEWTLRTYPAAQTHGMVVLHDMSDIALHNLDLRMPGEIQKAFSQSFPVRVASIILCHPPFFLKHIVGFFSSFMSSKLKARITTVGKNDKNLLDELFEPHNILVDLGLGGTAIWTQERHLEWVRRIDNDAKAWPEHT 311          
BLAST of Gchil1639.t1 vs. uniprot
Match: A0A8J1YWV0_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1YWV0_9DINO)

HSP 1 Score: 69.7 bits (169), Expect = 9.250e-10
Identity = 50/184 (27.17%), Postives = 86/184 (46.74%), Query Frame = 0
Query:   88 LAALRARKGDVKRAQQLMSNFLAWKRRLASSTDGDRCFRTTQKQLQSRFVFISGNADREARPVINVRMARHDPSTFSALDTVRTLATVLEWTVRTYP-----------AAQTHGVIIVHDFSNLKFHNLDLRLPGEVKNAFTQAFPIRVAAILVCHPPFFLKGII-GIVTSIMGKKLRARIRAI 259
            LA +R RK D  R  +LM  F    + +      D     ++ +++  F  +    D+  R V+N R+  H+P   S   T+R L  +L   +   P             Q +GV + HDF NL   N+D  +   +   F+  FP+R+ A+ +  PPFF++ I+  ++  ++ KKL +RI  +
Sbjct:   93 LACVRTRKYDDARIPKLMREFTDLLQEMKQWKKEDVIASISKNRVKEGFRLLP-RRDKHGRAVMNTRLRYHEPREVSTQTTIRALTLMLYNALLGAPFDEDKREAEAEKTQLNGVCVFHDFRNLTLSNVDPGVGRGLIKLFSGRFPLRLGAVYMLEPPFFIRYIVLPMMRLLLPKKLSSRITTV 275          
BLAST of Gchil1639.t1 vs. uniprot
Match: A0A8J2FU96_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2FU96_9DINO)

HSP 1 Score: 67.8 bits (164), Expect = 3.510e-9
Identity = 43/149 (28.86%), Postives = 74/149 (49.66%), Query Frame = 0
Query:  144 DREARPVINVRMARHDPSTFSALDTVRTLATVLEWTVRTYPA-----------AQTHGVIIVHDFSNLKFHNLDLRLPGEVKNAFTQAFPIRVAAILVCHPPFFLKGI-IGIVTSIMGKKLRARIRAIDGKDKHILAEYLAQDQIMDDL 280
            D+  R V+N R+  H+P    A   +R +  +L   ++  P+            Q +GV ++HDF  +   N+D  +   +   FT  FPIR+AAI +  PPFF++ + + I   IM  KL +RI+ +   +   L  +   DQ+++D 
Sbjct:  162 DKWGRGVLNTRLRHHNPKLVPAESAIRAVTLLLYNLLQGAPSEGDARAEEAEKTQLNGVCVLHDFRGISLSNVDPAIGRALFKLFTGRFPIRLAAIYIVEPPFFVRYVMLPIARMIMPTKLTSRIQPLSSVND--LKNFFEPDQLLEDF 308          
BLAST of Gchil1639.t1 vs. uniprot
Match: A0A7S1UYX5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYX5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.370e-6
Identity = 43/192 (22.40%), Postives = 84/192 (43.75%), Query Frame = 0
Query:   86 WLLAALRARKGDVKRAQQLMSNFLAWKRRLASSTDG--------DRCFRTTQKQLQSRFVFISGNADREARPVINVRMARHDPSTFSALDTVRTLATVLEWTVRTYPAAQTHGVIIVHDFSNLKFHNLDLRLPGEVKNAFTQAFPIRVAAILVCHPPFFLKGIIGIVTSIMGKKLRARIRAIDGKDKHILAE 269
            +LL  LRA   +   A + +  +  W +RL++            D+  +     L+  F  +    D   R ++    +++D + +S     R +   +   + +   AQ  GV+ +      K    D  L   V ++     P+RV+A+++CHPPFF   +  +V   MG+++R R+R + G    ++ E
Sbjct:   64 FLLQFLRAEVFNADLAAKRLCGY--WTKRLSAFGPDKAFLPMTLDQALKDDDFPLRMGFATLVPATDPVGRSILFFDPSKNDRTKYSIESLTRAVWYYMHAALES-ETAQQKGVVFMIYPQKAKLSQFDRGLANSVMSSLKLCMPVRVSALMICHPPFFFSIVFSVVKVFMGERVRKRVRVMSGSQISVMEE 252          
The following BLAST results are available for this feature:
BLAST of Gchil1639.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IFK4_9FLOR2.990e-11852.29Alpha-tocopherol transfer protein n=1 Tax=Gracilar... [more]
A0A8J1YWV0_9DINO9.250e-1027.17Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A8J2FU96_9DINO3.510e-928.86Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A7S1UYX5_9STRA1.370e-622.40Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 131..285
e-value: 1.8E-5
score: 34.2
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 135..279
e-value: 8.4E-21
score: 74.4
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 139..290
score: 10.185749
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 137..276
e-value: 3.30645E-16
score: 72.803
NoneNo IPR availableGENE3D1.10.8.20coord: 55..114
e-value: 9.3E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR10174ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATEDcoord: 79..279
NoneNo IPR availablePANTHERPTHR10174:SF208CRAL-TRIO DOMAIN-CONTAINING PROTEIN DDB_G0278031coord: 79..279
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 125..309
e-value: 4.9E-24
score: 86.8
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 130..297
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 58..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1380978..1381922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1639.t1Gchil1639.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1380978..1381922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1639.t1 ID=Gchil1639.t1|Name=Gchil1639.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=315bp
MPPGAAHDISHLQQNTPPPAGVSALLHAIRSLSAGNAGDELAHISRADLS
TPFVCSAEEEHALVQQLRHAANQDGNQCVANASHFWLLAALRARKGDVKR
AQQLMSNFLAWKRRLASSTDGDRCFRTTQKQLQSRFVFISGNADREARPV
INVRMARHDPSTFSALDTVRTLATVLEWTVRTYPAAQTHGVIIVHDFSNL
KFHNLDLRLPGEVKNAFTQAFPIRVAAILVCHPPFFLKGIIGIVTSIMGK
KLRARIRAIDGKDKHILAEYLAQDQIMDDLHMDGTATWSSDQHSEWVERV
GREKLAWPQVTQSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf
IPR036273CRAL/TRIO_N_dom_sf