Gchil1617.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1617.t1
Unique NameGchil1617.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length238
Homology
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A2V3IFI8_9FLOR (Homologous-pairing protein 2 homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFI8_9FLOR)

HSP 1 Score: 287 bits (735), Expect = 2.750e-95
Identity = 177/236 (75.00%), Postives = 202/236 (85.59%), Query Frame = 0
Query:    1 MAKGKKASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDMKNPVKRKGTAVGHTNKKAK 236
            M K KKASEDEE+V +FLKA+NRPFSVQNIVDSLQK+G+KK A ERSLASLVEKKLVTKKEYGKAKIFIA+Q +I+IP+ +EV  LDE XXXXXXXXXXXXXXXXX    A+ LR+ELTL+EAK+R  +L E TEQKE+KL SLGDGS+LMSKEDK+KLEL YYQARSLWKKY+RIVTDITDAIGEASGKK  ELFEEL I+SD AANVKLSDFP++ NP KR+  +     K+AK
Sbjct:    1 MTKAKKASEDEEVVLNFLKARNRPFSVQNIVDSLQKAGIKKAAAERSLASLVEKKLVTKKEYGKAKIFIAAQGLIDIPSQEEVNELDEXXXXXXXXXXXXXXXXXXLSKNANTLRSELTLEEAKERVAQLNEATEQKEEKLRSLGDGSTLMSKEDKQKLELSYYQARSLWKKYRRIVTDITDAIGEASGKKRSELFEELAIESDEAANVKLSDFPEIANPAKRQKRSPVSIQKRAK 236          
BLAST of Gchil1617.t1 vs. uniprot
Match: R7QFE6_CHOCR (Homologous-pairing protein 2 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFE6_CHOCR)

HSP 1 Score: 238 bits (606), Expect = 1.160e-75
Identity = 130/223 (58.30%), Postives = 167/223 (74.89%), Query Frame = 0
Query:    1 MAKGK-KASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDMKNPVK 222
            MAK K KAS++E+IV++FL  +NRPFSVQNIVD+LQK+GVKKTAVERSLASLVEK LV KKEYGKAKIFI +QD IE+P+P+EV RLDEE                      + L+++ TL++AK + ++L     +K+ K A LGDGS LM+ EDK KLE  YY  R+LWKKYKRIVTDI + IGEA+GKK  ELFE++GI++D + N+K+SDFPD++NP+K
Sbjct:    1 MAKAKQKASDEEDIVYTFLSKENRPFSVQNIVDALQKNGVKKTAVERSLASLVEKGLVKKKEYGKAKIFILAQDKIELPDPEEVTRLDEELKSMLAEVSDLTERNDNLQSTVNMLKSQYTLEQAKVQDEKLTNVLAEKDAKRADLGDGSKLMTTEDKLKLEKDYYNVRALWKKYKRIVTDIVNQIGEATGKKNSELFEDMGIETDESVNIKISDFPDIQNPLK 223          
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A7S1TM18_9RHOD (Homologous-pairing protein 2 homolog n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TM18_9RHOD)

HSP 1 Score: 163 bits (412), Expect = 2.540e-46
Identity = 97/221 (43.89%), Postives = 139/221 (62.90%), Query Frame = 0
Query:    5 KKASE--DEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDMKNPVKR 223
            KKA E  +E+IV  +L+ QNRPFSVQNIVD+LQK GVKKTA+ER+LA LV+ +  T KEYGKAKI+I  Q  IEIP  DE+  +D E                    + +AL++ELT ++A +  KE  E  E+ + KL  LGD ++L++KE+ + +EL  ++A++ WK+ KR+V D  D I E   KK + L +ELG++ D  A V ++D P   +P K+
Sbjct:    7 KKAGEGSEEQIVLRYLEQQNRPFSVQNIVDALQKDGVKKTAIERALAELVQNEKATCKEYGKAKIYIFGQSAIEIPPADELAAMDAEIARKAAELKSIDAEVSAQRQLNAALQSELTEEKAAELIKENKEIIERHKVKLEGLGDSANLLTKEEMQSIELALFKAKNEWKRRKRVVIDCLDQISEQMNKKRKVLADELGVEDDEEAGVDINDLPAATDPTKQ 227          
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A5J4Z299_PORPP (Homologous-pairing protein 2-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z299_PORPP)

HSP 1 Score: 152 bits (384), Expect = 2.720e-40
Identity = 90/230 (39.13%), Postives = 136/230 (59.13%), Query Frame = 0
Query:    2 AKGKKASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDMKNPVKRKGTAVGHT 231
            A GKKA +   +V  +++AQNRPFSVQN+VD+LQK GVKK  VE +LA+LVE   V  KEYGKAKI++A+Q  IE+P+P+E+  +DE+                    V +AL++++T  EA++   +L  +      KL  LGD ++L+S E  + + +  ++A++LWKK +R  TDI +   E+  KK   L EEL ++ D    V L + P+ ++P K K   V  T
Sbjct:  182 AAGKKADDATTVVAKYMEAQNRPFSVQNVVDALQKDGVKKKGVETALAALVEDGAVMVKEYGKAKIYLAAQQAIELPSPEEMHAIDEQIKAKDAELKALVKSSEEQHRVNAALKSQMTEQEARQELLKLEADAHDMHAKLDKLGDPANLISAEQMQAVGVKLFKAKALWKKRRRQATDIVETFCESMNKKPSVLCEELCVERDEDVGVALQNVPNGEDPTKLKRKRVSET 411          
BLAST of Gchil1617.t1 vs. uniprot
Match: M2XCS2_GALSU (Homologous-pairing protein 2 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XCS2_GALSU)

HSP 1 Score: 143 bits (360), Expect = 1.260e-38
Identity = 90/234 (38.46%), Postives = 132/234 (56.41%), Query Frame = 0
Query:    3 KGKKASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDMKNPVKRKGTAVGHTNKKAK 236
            K   A  +EEIV  FL+ QNRPFSVQNIVD+LQK G+KK   E+ L+SLVEK++V+ KEYGKAKI++  QD IEIP   EV+ +DEE                      + L +++T++EA+ +  EL    +Q  +KL  L  G   +  E+++KL+       S WK+ KR+  DI DAI E +  K +EL E++G+++D    +      DM+N + + G      N+  K
Sbjct:    5 KSSNAFAEEEIVMRFLEKQNRPFSVQNIVDALQKDGIKKALCEKILSSLVEKEVVSVKEYGKAKIYLFRQDTIEIPEQKEVEEMDEELRLKEEEYASITTEISELEKEVNYLSSQMTVEEARNKRDELESTLQQMNEKLQVLSAGIQQIDPEERKKLQQNLLYNVSNWKQRKRMAKDILDAISENANLKYKELCEQIGVETDETVGL------DMENILSKIGLNKSQVNRNVK 232          
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A2R6XGX7_MARPO (Homologous-pairing protein 2 homolog n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XGX7_MARPO)

HSP 1 Score: 133 bits (334), Expect = 8.210e-35
Identity = 81/218 (37.16%), Postives = 125/218 (57.34%), Query Frame = 0
Query:    6 KASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDMKNPVKR 223
            K S +E IV  F+  QNRP + QN+ D+LQK G+KK +VE+ L++L +K  ++ KEYGK KI++A QD  E+PN +E+ R+ +E                       ++++ LT  + K   ++L  E    E KL++L  G++L++ E+KEK+E  Y     LW+K KR+  D+ D I EA  K L EL EELGI+ D     K+ D+ ++   VK+
Sbjct:    4 KLSTNEGIVLDFINEQNRPLNAQNVADALQKHGIKKVSVEKILSTLGDKGQISFKEYGKQKIYLARQDQFEVPNAEELDRMRKENEQLQREINSSKTLISELEAELRSVQSNLTDKQIKLEMEKLNNEIPSLEAKLSTLKSGATLITSEEKEKIESAYTLKTGLWRKRKRMFKDLWDMITEAVPKNLTELKEELGIELDEDVGQKIEDYCNLTVAVKK 221          
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A6T6AXK2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AXK2_9RHOD)

HSP 1 Score: 122 bits (307), Expect = 1.960e-31
Identity = 71/160 (44.38%), Postives = 103/160 (64.38%), Query Frame = 0
Query:    4 GKKASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFY 163
            GKK S++E +V ++L+ +NRPFSVQNIVD+LQK GVKKTA ER+LASLVE   V  KEYGKAK+++  QD I++P+ D +  +D E                      +AL++ L+ +EA +R K L E  E+   KL +LGD S+L+S+E+K++ +  Y
Sbjct:    7 GKKGSDEESVVEAYLEEKNRPFSVQNIVDALQKDGVKKTACERALASLVEGGKVVCKEYGKAKLYLFRQDNIDVPDGDSLAEMDREIAEKVGQTKELAARCGEEEGEVNALKSTLSEEEAAQRRKSLAESVERLNTKLQALGDISNLVSREEKQREDAKY 166          
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A7J7LWZ4_9MAGN (Homologous-pairing protein 2 homolog n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LWZ4_9MAGN)

HSP 1 Score: 122 bits (305), Expect = 1.570e-30
Identity = 78/222 (35.14%), Postives = 119/222 (53.60%), Query Frame = 0
Query:    6 KASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDMKNPVKRKGTA 227
            K+   E IV +F+  QNRP + QN+ D+LQK  +KKT V++SL  L +   ++ KEYGK KI++A QD+ +IP   +++++ +                        AL + LTL            E E+ E+KL  L DG SL+  ED++ +E  + +  S WKK KR+  D+ D I E S K ++E  EELGI+ D  A V L+ F ++    K++G A
Sbjct:    4 KSDNGEGIVLNFVNEQNRPLNAQNVADALQKFNLKKTGVQKSLDCLADAAKISFKEYGKQKIYMARQDLFQIPTTQDLEQMKKLNATLQLELEDQKRVTTQIEGEIRALHSNLTLXXXXXXXXXXXXEVEKMEEKLNKLRDGISLVRPEDRKLIEGMFEEKISQWKKRKRMFKDLWDTITENSPKDVKEFKEELGIEYDEDAGVSLASFIELAPQGKKRGRA 225          
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A7S0ZD12_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZD12_9RHOD)

HSP 1 Score: 95.1 bits (235), Expect = 2.940e-21
Identity = 51/121 (42.15%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    3 KGKKASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEA 123
            KG    ++E+IV  +++ QNRPFSVQNIVD+LQK  +KK AVER+LAS +  + V  KEYGKAK+++ SQ  IE+P+P+E+  +D                      +  AL+ ELT ++A
Sbjct:    5 KGADGKDEEKIVLEYMETQNRPFSVQNIVDALQKENIKKAAVERALASCLAAETVVAKEYGKAKVYMCSQSGIELPSPEEMAEMDANISTLGARLKELDAEAQEIMALNQALKVELTEEQA 125          
BLAST of Gchil1617.t1 vs. uniprot
Match: A0A2V0PQ74_9CHLO (Homologous-pairing protein 2 homolog n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQ74_9CHLO)

HSP 1 Score: 97.4 bits (241), Expect = 3.630e-21
Identity = 63/208 (30.29%), Postives = 109/208 (52.40%), Query Frame = 0
Query:   10 DEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEXXXXXXXXXXXXXXXXXXXXVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSLMSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELGIDSDAAANVKLSDFPDM 217
            D++++   ++  N+PF+  NI D L   G+KK AV+R+L SL     +T KE+GK KI++  Q  +E+ + +++     E                            LT++E +++  EL  +T+ +  KL+ L  G++L++ E++EK+E  +  A   W+K + I   I D I E    K  +LFEE+GI++D AA V  S+  +M
Sbjct:    3 DDQVLRLVME-HNKPFNAVNIGDFLASKGIKKAAVQRALDSLAASGKLTVKEFGKTKIYLPPQAGLEVLSKEDMDAKKAELKALQQQLAEEQVALRKREEELRGWETSLTVEELQQQIAELKTKTDARAAKLSQLQGGTTLVTPEEREKVEKAFVGAMDAWRKRRGIFRSIWDTISEGLEGKQADLFEEIGIETDEAAGVSWSELVEM 209          
The following BLAST results are available for this feature:
BLAST of Gchil1617.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFI8_9FLOR2.750e-9575.00Homologous-pairing protein 2 homolog n=1 Tax=Graci... [more]
R7QFE6_CHOCR1.160e-7558.30Homologous-pairing protein 2 homolog n=1 Tax=Chond... [more]
A0A7S1TM18_9RHOD2.540e-4643.89Homologous-pairing protein 2 homolog n=1 Tax=Eryth... [more]
A0A5J4Z299_PORPP2.720e-4039.13Homologous-pairing protein 2-like n=1 Tax=Porphyri... [more]
M2XCS2_GALSU1.260e-3838.46Homologous-pairing protein 2 homolog n=1 Tax=Galdi... [more]
A0A2R6XGX7_MARPO8.210e-3537.16Homologous-pairing protein 2 homolog n=2 Tax=March... [more]
A0A6T6AXK2_9RHOD1.960e-3144.38Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7J7LWZ4_9MAGN1.570e-3035.14Homologous-pairing protein 2 homolog n=1 Tax=Kingd... [more]
A0A7S0ZD12_9RHOD2.940e-2142.15Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A2V0PQ74_9CHLO3.630e-2130.29Homologous-pairing protein 2 homolog n=1 Tax=Raphi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..144
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..237
IPR010776Homologous-pairing protein 2, winged helix domainPFAMPF07106TBPIPcoord: 9..70
e-value: 2.8E-20
score: 72.0
IPR040661Leucine zipper with capping helix domainPFAMPF18517LZ3wCHcoord: 153..204
e-value: 1.6E-6
score: 28.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..79
e-value: 2.1E-22
score: 80.9
IPR040461Homologous-pairing protein 2PANTHERPTHR15938TBP-1 INTERACTING PROTEINcoord: 3..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1173675..1174388 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1617.t1Gchil1617.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1173675..1174388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1617.t1 ID=Gchil1617.t1|Name=Gchil1617.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=238bp
MAKGKKASEDEEIVHSFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLAS
LVEKKLVTKKEYGKAKIFIASQDIIEIPNPDEVKRLDEEISELQEQLSSI
SGETDQLSGVASALRAELTLDEAKKRTKELIEETEQKEQKLASLGDGSSL
MSKEDKEKLELFYYQARSLWKKYKRIVTDITDAIGEASGKKLEELFEELG
IDSDAAANVKLSDFPDMKNPVKRKGTAVGHTNKKAKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010776Hop2_WH_dom
IPR040661LZ3wCH
IPR036388WH-like_DNA-bd_sf
IPR040461Hop2