Gchil1612.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1612.t1
Unique NameGchil1612.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length379
Homology
BLAST of Gchil1612.t1 vs. uniprot
Match: A0A2V3IFE6_9FLOR (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 541 bits (1395), Expect = 1.510e-190
Identity = 268/380 (70.53%), Postives = 311/380 (81.84%), Query Frame = 0
Query:    1 MEVVPGTPVNEECSRLVKHFSEAKDNGNGTVSIATGSIHHNTNKCEKGTMLMYDNPEQNPVSGVGGSDATFENLKKSDGFWVGESTRNCGRWKLPNPTAVFMVYDGDTDLVGPFEVPLHKGSTYMIFTNARYTCIYRDVERPSPRPSPIPTKALL---SEADGETFSAAESINDGDTVAVPVTVLPGVPKETVEASSDEDDGSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETESAQITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHGAAVV 377
            MEVVPGTPV EECS+LVKHF +A  N NGTV I TGSI HN NKC +GTMLM+D+PE NPV+GVG +D TF+NL+ SDGFWVGESTRNCGRW+LP PTAVFMVYD +  LVGP+ VPL KG TYMIFTN R+TCIYRDV  PSPRPSP          SEADGETFSAAE INDGDTV VPVTVLPGVPKE+ EA++++DDGSTCFPAD TVE+E G+ K+MA + IGD VRVG + FSEVFMFTH+L +  + FV+IET+S+ I+LT GHYL+VNG LAAAKTV+VGD +E+ASGETA V AVK +  +GLYNPQT+SGDI+VNGIRASTYTT V+P  AHRLLTP RALY  FGVA SAF  GA +LAK+AP GAA++
Sbjct:   37 MEVVPGTPVKEECSKLVKHFGQATPNDNGTVLILTGSIQHNGNKCREGTMLMHDSPETNPVAGVGKADETFDNLQVSDGFWVGESTRNCGRWQLPKPTAVFMVYDKNRKLVGPYNVPLEKGFTYMIFTNKRFTCIYRDVPPPSPRPSPXXXXXXXVAPSEADGETFSAAEDINDGDTVGVPVTVLPGVPKESAEATAEDDDGSTCFPADTTVELEDGSVKEMAQVNIGDRVRVGRSMFSEVFMFTHRLQDGENYFVKIETDSSGISLTKGHYLFVNGVLAAAKTVQVGDLVELASGETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHRLLTPFRALYQAFGVATSAFERGAVNLAKLAPQGAAIL 416          
BLAST of Gchil1612.t1 vs. uniprot
Match: R7Q619_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 202 bits (514), Expect = 1.060e-59
Identity = 114/245 (46.53%), Postives = 155/245 (63.27%), Query Frame = 0
Query:  144 PRPSPIPTKALLSEADGETFSAAESIND---GDTVAVPVTVLPGV--------PKETVEASSDEDDGSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETESAQ-ITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHGAAV 376
            P+PS  P    + ++D    S +  I+D   G    VP    P          P  +++   ++DD S CFPA+A VE+E GATK M+ + +GD VRVGPN+FS+VFMFTHK   + + FV + T+S   ++LT GHYLYVNG +AAAKTV  GD + +A G T+ V  V + ++ GLYNPQT+ GDI+VNG+ A+TYTT VE  +AH LL PLRA+Y   G ++SA + GAD LA I P G+ V
Sbjct:    2 PQPSDGPDG--MEDSDDMMESPSPDIDDVLTGGADGVPGESEPAATDDLSDLSPSPSLDDEGEDDDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAVYSSIGWSMSALDAGADRLAGIVPSGSVV 244          
BLAST of Gchil1612.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 199 bits (506), Expect = 9.640e-56
Identity = 107/202 (52.97%), Postives = 137/202 (67.82%), Query Frame = 0
Query:  182 LPGVPKETVEA------SSDEDDGSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETESAQ-ITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHGAAV 376
            LPG+  E +++      S D+DD + CFPADATV++E G+ KKM D+ +GD V V    FS VFMFTHKL  V + FV I+T S   ++LT GHYLYVNG L+AA TV+ GD L +A      V  V ++ S+GL+NPQT+ GDI+VNG++ASTYTTAVEP LAH LL+PLRA Y   G ++ AF  GAD +A   P GA V
Sbjct:  284 LPGIIGEGLDSTDAASPSPDDDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLRAAYSRLGFSLRAFEAGADRIASYMPSGALV 485          
BLAST of Gchil1612.t1 vs. uniprot
Match: UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 190 bits (483), Expect = 2.850e-54
Identity = 96/176 (54.55%), Postives = 122/176 (69.32%), Query Frame = 0
Query:  199 GSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETESAQ-ITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHG 373
            GS+CFP  A VE+E GA ++M  + IGD V+VG  EFSEVFMFTHK     ++FV+I T S   ++LT GHY++VNG LAAA  V VGD L++ +GE   V  V  + S G+YNPQT+ GDI+V GIR STYTTAVEP LAH  L  +R++Y +FG+  S F  GADS+A   PHG
Sbjct:  129 GSSCFPGSAMVELESGARQRMDKMKIGDRVKVGRAEFSEVFMFTHKTHTGIYDFVKITTSSGHSVSLTGGHYIHVNGGLAAASVVAVGDMLQLGTGEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLGAIRSMYRIFGLTFSMFEQGADSIASFLPHG 304          
BLAST of Gchil1612.t1 vs. uniprot
Match: A0A2V3IGP9_9FLOR (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 6.900e-54
Identity = 106/218 (48.62%), Postives = 145/218 (66.51%), Query Frame = 0
Query:  166 AESINDGDTVAVPVTVLPGVPKETVEASSDE-----DDGSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETESAQ-ITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHGAAVV 377
            + +++DG+T    V+ L    + + E S DE     DDGS CFPA ATVE+E G+ K M  I +GD V+V   EFS VFMFTHK+  +++ FV +   S   + LT GHYLYVNG LAAA++V VGD +E  +G  + V AV  ++S GLYNPQT++G+I+VNG+RASTYTTAVE   AH LL PLRA++ + G+  +  +NG+D LA + P G  +V
Sbjct:  265 SSTVDDGETAVDAVSGLEEEAQISPEGSDDEEEEGEDDGSACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAGVVS-VSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAVFRLAGMTSAMLDNGSDKLASMLPSGGIIV 481          
BLAST of Gchil1612.t1 vs. uniprot
Match: R7QIA6_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA6_CHOCR)

HSP 1 Score: 182 bits (461), Expect = 2.110e-49
Identity = 88/175 (50.29%), Postives = 119/175 (68.00%), Query Frame = 0
Query:  200 STCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETES-AQITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHG 373
            S CFPADA+VE+E G+ K MA + +GD V+V    FS+VFMFTHK  +  H+FV I T S A ++ T GHY+Y+N A AAA + +VGD LE+  G   +V  V  +  +GL+NPQT+ GDI+VN +RAST+T  +EP  A  +L PLR LY  FG++ +  NNGADS+A + P G
Sbjct:  283 SVCFPADASVELENGSFKTMAQVELGDRVKVADGSFSDVFMFTHKDASAVHDFVRISTRSGASLSATRGHYIYINNAFAAAGSAKVGDTLELGDGSKTLVSNVGIVKGTGLFNPQTVHGDIIVNSVRASTFTRTIEPSAAQAMLAPLRMLYDTFGISTAFLNNGADSIASVLPKG 457          
BLAST of Gchil1612.t1 vs. uniprot
Match: A0A2V3IRZ6_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 180 bits (457), Expect = 6.130e-49
Identity = 92/177 (51.98%), Postives = 126/177 (71.19%), Query Frame = 0
Query:  202 CFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETES-AQITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHGAAVV 377
            CFPA+ATVE+E G+TK+M  + IGD V+VG + FSEVFMFTHK+     +FV+++  S A I+ TSGHY+Y+NG LAAA+T +VGD +E+ +G  + V  V  +  SGLYNPQT+ GDI+VN +RAST+TTA+E   A  +L PLR +Y VFG + SAF+ G D + K+   G  V+
Sbjct:  272 CFPAEATVEMEDGSTKRMDQVQIGDRVKVGYDMFSEVFMFTHKVSKRVSQFVKLDMASGASISATSGHYVYLNGRLAAARTAKVGDVMELGNGARSTVEKVSMVRKSGLYNPQTLHGDIIVNEVRASTFTTAIEAGTAQAMLAPLRMVYDVFGWSTSAFDGGFDMINKLVTKGELVL 448          
BLAST of Gchil1612.t1 vs. uniprot
Match: A0A1X6PD14_PORUM (Hint domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD14_PORUM)

HSP 1 Score: 177 bits (448), Expect = 9.880e-47
Identity = 132/413 (31.96%), Postives = 185/413 (44.79%), Query Frame = 0
Query:   13 CSRLVKHFSEAKDNGNGTVSIATGSIHHNTNKCEKGTMLMYDNPEQ----NPVSGVGGSD----ATFENLKKSDGFWVGESTRNCGRWKLPNPTAVFMVYDGDTD---LVGPFEVPLHKGSTYMIFTNARYTCIYRDVERPSP--------------RPSPIP--------------------------TKALLSEADGETFSAAESINDGDTVAVPVTVLPGVPKETVEASSDEDDGSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETESAQITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGV-FGVAISAFNNGADSLAKIAPHG 373
            C + + HF+      +G   I   S + +   C+  T+L     EQ    N  + V  +D     T E   +S GFW+G + R CG+++ P+ T V  VY  +T+   L+G FE+P      YMI     +TC YR   +  P                 P+                                               +GD       VL G   E     S  D+ S CFPA A + +  G    +  +  G +VRVG    SEVF+F+HK+    H F+ + T +  +TL++GHY+Y NG L AA  V VGD LE A G T  V A+ ++ +SGLY P T+ GD++V+G R STYTTAVEP LAH LL P+RA Y   + +       G+  LA IAP G
Sbjct:  154 CPKTIAHFNSGAQQDDGGTVIPAKSYNMDGASCD--TVLRLTPSEQLSEENLPADVTANDNAVALTTELFAESTGFWLGTAGRTCGKFRWPDDTTV--VYFEETEALTLLGAFELP--PQFKYMIVAGRGFTCAYRAQPKAGPVTGGDGXXXXXXXXXXXPVXGXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDLGTPVGGVLEG---EDDPEPSPSDEDSACFPASAALTLADGTAVGVDILATGHTVRVGKAAHSEVFLFSHKVAGGDHPFLRLTTAAGALTLSAGHYVYANGGLKAAAAVAVGDTLETADGATVPVSAITAVRASGLYAPHTLHGDVVVDGFRVSTYTTAVEPRLAHALLAPVRAAYRAGYQLVGDRLEGGSRFLASIAPKG 557          
BLAST of Gchil1612.t1 vs. uniprot
Match: A0A1X6P3Z4_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 172 bits (435), Expect = 2.470e-46
Identity = 96/231 (41.56%), Postives = 138/231 (59.74%), Query Frame = 0
Query:  148 PIPTKALLSEADGETFSAAESINDGDTVAVPVTVLPGVPKETVEASSDEDDGSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETES-AQITLTSGHYLYVNGALAAAKTVEVGDKLE-VASGETAIVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHGAAV 376
            P P+ +++   DG      E +++ +                  + +D DD   CFPA A VE++ G T  M  + +GD+VRV  + FS VF+FTHK+   +  FV++ T S A +T+T  HY+Y NG + AA  V++GD+LE V + +  I+ A   +  +GLYNPQT+ GDI VNGIRAST+TTAVEP +A  LL PLRAL+   GV+ SA + G+  LA + P GA+V
Sbjct:  171 PTPSASVIVPGDGSEPDVIEGLSEAEP-----------------SPTDGDDDDVCFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRALFRATGVSTSALDAGSARLAALLPRGASV 384          
BLAST of Gchil1612.t1 vs. uniprot
Match: A0A1X6NXN0_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXN0_PORUM)

HSP 1 Score: 177 bits (448), Expect = 3.690e-46
Identity = 101/199 (50.75%), Postives = 129/199 (64.82%), Query Frame = 0
Query:  183 PGVPKETVEASS--DEDDGSTCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAHEFVEIETES-AQITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETA---IVLAVKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYGVFGVAISAFNNGADSLAKIAPHGAA 375
            PG P    E+    DEDD S CFPADATVE+  G T  MAD+ +GD VRV    +S VF+FTH++      FV + T + A +T T+GHY+Y NG L AA  V VGD+LE   G+ A   +V A   +  +GLYNPQT+ GDI+VNGIRASTYT A+EP +A  LL PLRAL+ + G+  +A + GAD LA + P GAA
Sbjct:  460 PGDPAPIDESPPPLDEDD-SVCFPADATVELADGRTVPMADVALGDHVRVSATAYSPVFLFTHRVRGGRRPFVRLTTAAGASLTATAGHYVYANGRLTAAGAVRVGDRLETV-GDAATCTVVTATARVAGTGLYNPQTLHGDIVVNGIRASTYTMAIEPAVASTLLAPLRALFRLAGLTTTALDGGADRLAALLPSGAA 656          
The following BLAST results are available for this feature:
BLAST of Gchil1612.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFE6_9FLOR1.510e-19070.53Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]
R7Q619_CHOCR1.060e-5946.53HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IX71_9FLOR9.640e-5652.97Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
UPI001E1DDBBD2.850e-5454.55warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A2V3IGP9_9FLOR6.900e-5448.62Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QIA6_CHOCR2.110e-4950.29HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IRZ6_9FLOR6.130e-4951.98Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A1X6PD14_PORUM9.880e-4731.96Hint domain-containing protein n=1 Tax=Porphyra um... [more]
A0A1X6P3Z4_PORUM2.470e-4641.56HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6NXN0_PORUM3.690e-4650.75HintN domain-containing protein n=1 Tax=Porphyra u... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 200..292
e-value: 6.4E-10
score: 49.0
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 202..330
e-value: 5.1E-32
score: 113.3
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 193..357
NoneNo IPR availablePANTHERPTHR11889:SF31PROTEIN HEDGEHOGcoord: 193..357
NoneNo IPR availableCDDcd00081Hintcoord: 202..324
e-value: 8.04104E-12
score: 60.3606
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 198..353
e-value: 9.2E-28
score: 97.2
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 202..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1164364..1165500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1612.t1Gchil1612.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1164364..1165500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1612.t1 ID=Gchil1612.t1|Name=Gchil1612.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=379bp
MEVVPGTPVNEECSRLVKHFSEAKDNGNGTVSIATGSIHHNTNKCEKGTM
LMYDNPEQNPVSGVGGSDATFENLKKSDGFWVGESTRNCGRWKLPNPTAV
FMVYDGDTDLVGPFEVPLHKGSTYMIFTNARYTCIYRDVERPSPRPSPIP
TKALLSEADGETFSAAESINDGDTVAVPVTVLPGVPKETVEASSDEDDGS
TCFPADATVEVEGGATKKMADITIGDSVRVGPNEFSEVFMFTHKLDNVAH
EFVEIETESAQITLTSGHYLYVNGALAAAKTVEVGDKLEVASGETAIVLA
VKSIMSSGLYNPQTMSGDILVNGIRASTYTTAVEPMLAHRLLTPLRALYG
VFGVAISAFNNGADSLAKIAPHGAAVVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf