Gchil1599.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1599.t1
Unique NameGchil1599.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length967
Homology
BLAST of Gchil1599.t1 vs. uniprot
Match: A0A2V3IFH2_9FLOR (tRNA pseudouridine synthase A, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH2_9FLOR)

HSP 1 Score: 1308 bits (3385), Expect = 0.000e+0
Identity = 660/964 (68.46%), Postives = 786/964 (81.54%), Query Frame = 0
Query:    1 MGSYFSRTTGAGEDSKRNAELPNSELLSDEHIQRPWKKRRVNEKRKRIDKSTAPPTRAMKDAPLGHRNTEGLEMGNSKALMALSNESRNL--DSLDEM-NGKISNTGGLDSRDVDS-----RRIRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTNSIEKGSKEGNGDPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWVKSCRDRFQYNHDEILELHHKFVLTDVGKEEQRKAYVASLYPIRTTLQEFLESDSEDMMKMAMDLRKMFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGIALRQGSMLAGCLDNTDVIEIQHARNDLFQSGKLRADGLRMVLEEENETLDSDWIQYVSWGVKPVYNSIAKGKRSVSGGGRLLVSGDLPLAAGLASSSSLVTLSALATARLNRKRFPKQELALLAAEGERVGAGTRGGAVDHVISACGGKECATSVSFIPRVNVKSLRLPKSASLIAVGSHVKARKGFDSFVKDQFNLRAAECRIASGILARRLKVHFEMSVTTPGQLYFQAKRTSKLQCRTISALRKMTQEVMDITEIVSLDDAKKELGVTEVELRNRFLVGVEAECFATGKRMAHVLSEAERVENFAAVLNDEDCDEQEKLQRLGSILQEGHESLRMHYESSCVEVDELVEFCLANGAIGSRITGAGWGGYTINLVPIEKKGPFMESVKGKVGRESVIDIEPSAGICLFAIHSTLGGSSQK 956
            MGSYFSRT    E S    ++  S    + H +RP K+RR+N+++ R  K   PPTRAM ++     NT    M N K     S++ + L  DS+D   N      G  D ++ D+     RR RKRK+ VFLGYNGE+YYGMQINPGV+TIE+VLL+ FH+AGLISD+NK SPGKVQWMRAARTDKGVSAIVQCVS KLE+  ++I+D  +I SIN HLPED+QVYG+LRPTGGFNAR+ CHRRRYEYIFPVRLLGG N ++K ++ G GDPRA +L SILKRFEGTHCFANFT+GLS S+DAS+RYMISL+CSQPFKPP+SG++YVSVEI+GQSFLLHQIRKM+GLSLYVY GHAPEET+SVALCP+VK+HTP APALGLLL+NL+F+NYNKRFK  LEQPISSD F E ++KFK  +VYRRIAEKER ER+LETWVK+ R+RFQY H+EI ELH KFVL+DVGKEEQRK YVASLYPI+T+L +FL+ D+ +MMKMA  L   F ERY V P+F+ARAPGRVNLIGEHLDYNG PVIG+ALRQGSMLAGCLD+T+VIE+QH R D++  GKLRADGLRM LE E++ LDSDWIQYVSWGVK     + KGKR+VSGGGR+L+SGDLPLA+GLASSSSLVTLSALATARLNRKR PKQE+AL  AEGER+GAGTRGGAVDH IS C  K CA  VSF PR+ V+SL LPK+A L+AVGS+VKARKGFD  VK QFNLRAAECRIA+ ILARRL+VH E SVTTPGQL FQAK+TSKLQCRTIS LR+   E M I+E+VSL+D K++LGV EVEL+NRFL+GV+AE FA GKRM+HV SEAERVE F  +L +E+ D++ KL+ +G IL+EGH SLR +YESSC EVDELVEFCLANGA+GSR+TGAGWGG+TI++VP+EKK  F+++V  +VG+ SVI++EPS G C+ AIH  LGG  +K
Sbjct:    1 MGSYFSRTGEDHETSNDTVDIQPSNAFGETHGRRPHKRRRLNQEKTRKGKDIPPPTRAMNNS---RDNTTQKTMCNEKP----SSDDQRLRSDSMDRRGNSSAVIKGSEDVKEADALKANARRPRKRKFVVFLGYNGEKYYGMQINPGVVTIERVLLSAFHKAGLISDENKESPGKVQWMRAARTDKGVSAIVQCVSAKLEVFPQQINDPQLIASINDHLPEDVQVYGILRPTGGFNARADCHRRRYEYIFPVRLLGGPNGVQKENEVGKGDPRATKLNSILKRFEGTHCFANFTDGLSGSDDASRRYMISLSCSQPFKPPKSGVFYVSVEIYGQSFLLHQIRKMIGLSLYVYHGHAPEETLSVALCPNVKIHTPMAPALGLLLENLIFDNYNKRFKDVLEQPISSDAFREAKMKFKAHEVYRRIAEKERNERVLETWVKNYRERFQYKHEEIRELHQKFVLSDVGKEEQRKQYVASLYPIKTSLSDFLDCDAPEMMKMATALSCQFSERYDVPPTFLARAPGRVNLIGEHLDYNGLPVIGVALRQGSMLAGCLDDTEVIEVQHVRRDVYHRGKLRADGLRMALENEDDRLDSDWIQYVSWGVKAAIAGLPKGKRAVSGGGRVLISGDLPLASGLASSSSLVTLSALATARLNRKRIPKQEIALRGAEGERIGAGTRGGAVDHAISMCASKGCAVHVSFTPRIAVRSLLLPKNAVLVAVGSNVKARKGFDELVKQQFNLRAAECRIAAAILARRLEVHLEKSVTTPGQLLFQAKKTSKLQCRTISTLREKALEAMPISEVVSLEDVKEQLGVQEVELQNRFLIGVKAETFAVGKRMSHVFSEAERVEQFFELLTNEENDDRAKLEGMGRILEEGHRSLRDYYESSCSEVDELVEFCLANGAVGSRVTGAGWGGFTISVVPVEKKDSFLKAVTKRVGKGSVIEVEPSGGACVLAIHGVLGGPDRK 957          
BLAST of Gchil1599.t1 vs. uniprot
Match: R7QUC6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUC6_CHOCR)

HSP 1 Score: 1002 bits (2591), Expect = 0.000e+0
Identity = 497/851 (58.40%), Postives = 641/851 (75.32%), Query Frame = 0
Query:  111 VDSRRIRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTNSIEKGSKEGNGDPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWVKSCRDRFQYNHDEILELHHKFVLTDVGKEEQRKAYVASLYPIRTTLQEFLESDSEDMMKMAMDLRKMFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGIALRQGSMLAGCLDNTDVIEIQHARNDLFQSGKLRADGLRMVLEEENET--LDSDWIQYVSWGVKPVYNSIAKGKRSVSGGGRLLVSGDLPLAAGLASSSSLVTLSALATARLNRKRFPKQELALLAAEGERVGAGTRGGAVDHVISACGGKECATSVSFIPRVNVKSLRLPKSASLIAVGSHVKARKGFDSFVKDQFNLRAAECRIASGILARRLKVHFEMSVTTPGQLYFQAKRTSKLQCRTISALRKMTQEVMDITEIVSLDDAKKELGVTEVELRNRFLVGVEAECFATGKRMAHVLSEAERVENFAAVLNDEDCDEQEKLQRLGSILQEGHESLRMHYESSCVEVDELVEFCLANGAIGSRITGAGWGGYTINLVPIEKKGPFMESVKGKVGRESVIDIEPSAGICLFAIHSTLG-GSSQKTE 958
            V   + RKRK AVFLGY GE YYGMQ+NPGVITIEQVLL+ F+RAGLIS+ NK+S  KV WMRAARTDKGVSA  QCVS KLE   E+     V+ +IN+HLP D+ VYGL+R T  FNAR  CHRRRYEY+FPVRLLGG N + K  + G GDPRAAR T+ILKR+EGTHCFA+FT+GL+  +D+S+R+MI + C QPF PP SG+YYVSVE++GQSFLLHQIRKMVGL+L+++LGHAPEETI VALCP++K+ TP APALGLLLD L FENYN R +  LE+PI+ D F E + KFK +++Y++IAE+ER ERILETWV++C  + +Y+ DEI +LH KFVLTD G+EEQR+A++ASLYPI+T ++ FL+   E+  ++A  +++ F+ RYG  PSF+ARAPGRV LIGEHLDYNG PVI +A  QG+M AGCLD+T+ IE+ H  N  +  G  R  G RM + E+ +   +D +W+QYVSWG+K +  S+   KR+V+GGGRLLV G+LP A G++SSSSLV  SAL  ARLNRKR PKQE+ALLAA  ER GAGT+GGAVDH+ S CG +E A  +SF P V +  + +P   +L AV S V+A KGFD  V+ +FN+RAAECRI + ILARRLKVH   SVTTPGQL FQA +TS L+CR++S LR +  EVM   EI+SL + ++ELG+ E+EL+NRF++GV+   F  G+RM+HV SEA RVE+F  V  D +     +LQ+ G IL EG  SL+  +ESSC EVD++V+FC  +GA+GSR+TGAGWGGYTINLVP ++   F  +V    G E+V+++ P++G C+FAIH + G G  ++T+
Sbjct:   23 VQHPKRRKRKVAVFLGYIGENYYGMQMNPGVITIEQVLLSAFYRAGLISEANKDSLSKVNWMRAARTDKGVSAAGQCVSAKLECEVEKNIAPGVVEAINHHLPADVMVYGLMRATAAFNARMDCHRRRYEYMFPVRLLGGPNEVMKEEEPGAGDPRAARFTNILKRYEGTHCFASFTDGLTGKDDSSRRFMIRVRCGQPFLPPNSGVYYVSVEVYGQSFLLHQIRKMVGLALFIHLGHAPEETIPVALCPNMKIPTPMAPALGLLLDTLTFENYNLRHQSVLEKPITVDQFREAKEKFKLERIYKKIAERERLERILETWVRTCHQKQRYDADEIGKLHEKFVLTDDGREEQRRAHIASLYPIKTNMRAFLDVPDEETFRLAKAMKEQFQVRYGEEPSFLARAPGRVILIGEHLDYNGLPVITLATTQGTMFAGCLDSTEHIEVCHVENSRYGPGMFRNSGTRMAVSEDEKVSLVDRNWLQYVSWGIKALVESLPMSKRTVTGGGRLLVGGNLPRAGGMSSSSSLVAGSALVAARLNRKRIPKQEIALLAARAERDGAGTKGGAVDHITSLCGVRESALKISFTPHVVIDKVEIPDGVALFAVNSGVRAEKGFDDRVRSEFNMRAAECRIGAAILARRLKVHLCKSVTTPGQLLFQACKTSILKCRSMSQLRTIAFEVMQNDEILSLSEVRQELGLAEIELQNRFVMGVQGSIFEVGRRMSHVFSEAVRVEDFVRVSMDHNSAPSVRLQQFGRILNEGQTSLKEVFESSCPEVDQVVDFCRKSGAVGSRMTGAGWGGYTINLVPKDRASHFKHAVTEMYGNEAVVEVTPNSGGCIFAIHKSYGTGDRERTK 873          
BLAST of Gchil1599.t1 vs. uniprot
Match: A0A7S2ZYH9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYH9_9RHOD)

HSP 1 Score: 317 bits (812), Expect = 1.270e-90
Identity = 252/851 (29.61%), Postives = 410/851 (48.18%), Query Frame = 0
Query:  107 DSRDVDSRRIRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTNSIEKGSKEGNGDPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWVKSCRDRFQYNHDEILELHHKFVLTDVGKEEQRKAYVASLYPIRTTLQEFLE----SDSEDMMKMAMDLRKMFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGIALRQGSMLAGCLDN-TDVIEIQHARNDLFQSGKLRADGLRMVLEEENETLDSDWIQYVSWGVKPVYNSIAKGKR-SVSGGGRLLVSGDLPLAAGLASSSSLVTLSALATAR-LNRKRFPKQELALLAAEGERVGAGTRGGAVDHVISACGGKECATSVSFIPRVNVKSLRLPKSASLIAVG----SH--VKARKGFDSFVKDQFNLRAAECRIASGILARRLKVHFEMSVTTPGQLYFQAKRTSKLQCRTISALRKMTQEVMDIT-----EIVSLDDAKKELGVTEVELRNRFLVGVE-AECFATGKRMAHVLSEAERVENFAAVLNDEDCDEQEKLQRLGSILQEGHESLRMHYESSCVE-VDELVEFCLANGAIGSRITGAGWG---GYTINLVPIEKKGPFMESVKGKVGRESVID 934
            D  ++   + +KR+  +F+GY G  Y GMQ N    TIE  L+        + D  ++   K++W R+ARTDKGVSA  Q VS  L+   +    +S+++ IN  LPEDI VYG +R TG F+A++ C RRRYEY+ P   LG     E    E     R AR   IL R+ G+H F NFT+ +   +  ++RY++   CS+PF    S   ++ V + GQSF+LHQIRKMVGL+L V+    P ET+ + +    KL TPTAPALGLLL    F  YN+R++  L +PI+ D F E    FK   +Y  IA +E   R ++ W+    +    +   I+             EE+RK  + SLYP+   L    +    ++ +      + +++ F+  +G +PS + R PG   LIG+ L+    P IG AL  G + A    + ++ + + H+  DL  +  LR +G RM   E++  ++  W +  S G +   +   KG R  +    R+++ G+L  +       S   L+AL T   L+  + P+ E+A +    E+ G G+  G + ++ S  G       +S  P++   +++LP   SL+ +     SH  V+ RK     +K       AE  +AS I++ R                  + R    Q      ++    EV++       E+VSL+    ELG+ E+E+  R   G++  +    G        EA+ V    ++L   +   + +   +G +L +  E++R   ES+  E   ++VE C+  GA+ +R++         Y +  V  E  G F +S+  +   ES++D
Sbjct:   12 DKGEIQPPKPKKRRVVLFMGYLGSGYQGMQRNRDAKTIEGELMRALVNTACVPDHLQDDYAKLKWSRSARTDKGVSAAGQVVSADLKCEVDGQLSQSLLDQINESLPEDITVYGWMRATGSFSAKADCVRRRYEYLLPTSGLGQ----EDVDNEKVVSARIARFNVILARYTGSHLFHNFTDKMKGDDPTAQRYILECTCSEPFTIQNSS--FLKVSLVGQSFVLHQIRKMVGLALQVFWSGLPPETLDLFMSAEKKLQTPTAPALGLLLSECFFIFYNRRYQKELRKPIALDHFRETAEDFKRSHIYSFIASEEARTRSMKKWISLLPESIPLDSCTIIGDVEMLSNAKREAEERRKRRLESLYPVFEDLDSVFQIQDVAELQQRKNTVLQMKQTFDREFGYSPSSIVRVPGSAILIGDWLELLELPCIGFALPDGVLTAVAKSSDSENVRVNHSNEDLADA-VLRPNGCRMASTEDSTKVE--WSRMFSLGWQCGVSG--KGMRPKMLPAARVMIGGELGPSDNELGVDSAYLLAALLTFMDLHSWKMPRLEMAKMGFGWEKQGRGSATGLMKYLCSLEGKHNQLLLISITPKLCTSNVKLPSMISLVMIRLGNRSHAEVERRKKTRDMIK-------AEISVASRIISVR------------------SGRGEGPQKSLAQVIQDKPSEVLEACGIGPDEVVSLELVMVELGI-ELEVLERQEPGIKHLQEIRLGLVTRCAAMEAQCVGRVYSILERSEDLSRLEFMEIGKLLNDS-ETIRRKLESTSDEQATQVVEKCIEKGALSARLSSVFVDVNTSYVLCTVNSESVGAFCQSLGDE--SESILD 822          
BLAST of Gchil1599.t1 vs. uniprot
Match: A0A7S1ET85_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET85_9RHOD)

HSP 1 Score: 276 bits (707), Expect = 1.690e-77
Identity = 169/450 (37.56%), Postives = 256/450 (56.89%), Query Frame = 0
Query:  116 IRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNE-RIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTNSIEKGSKEGNGDP----RAA--RLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNC-SQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQP--ISSDTFEEERLKFKTQKVYRRIAEKEREE------RILETWVKSCRDRFQYNHDEILELHHKFVLTDVGKEEQRKAYVASLYPIRTTLQE-FLESDSED-----MMKMAMDLRKMFEERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGIALRQGSMLA 543
            ++KRK A+F+ Y GE Y GMQ NPGV TIE  L    ++AG IS DN     KV W RAARTDKGVSA  Q VS+K++   +  + +  ++  IN +LP+ I+  GL + TGGF AR+ C RR+YEY+ P+  L      ++  ++ N +     RAA  +   IL+++EGTH F NFTE LS  + ++ R+MIS+ C S+  +  +  +  + V + GQSF+LHQIR M+GL+L ++   AP E I VAL    K+  P APALGLLLD  +F+ YN+RF   L +   I S +F   +  FK   +Y  IA+ E E+        +E W+K   + F+Y+ ++I   +       + +E+ RK   ++ YPI    ++ FL + S       +  +   +R  +E+RY +TP +++R P  V + G  +D+ G PV+G A    S +A
Sbjct:   47 LKKRKVALFVSYLGEGYSGMQKNPGVRTIEDELEYAVYQAGGISKDNYGQLQKVHWSRAARTDKGVSAAGQVVSLKMQCEKDGEVQESELVERINENLPQTIRAIGLRKSTGGFCARADCDRRKYEYLLPINALFPVTEHKEAQQQNNSEDLDSIRAAVDKFNLILRKYEGTHKFHNFTEKLSPEDGSASRFMISVRCDSEVLRIDEYNL--LRVILIGQSFVLHQIRNMIGLALMIHHQKAPPEAIDVALSSDGKVLVPMAPALGLLLDECMFDRYNQRFSSLLSKSGLIDSLSFSNTKEAFKRSVIYPHIAKIEHEKVPGTELGNMEYWLKKSFNGFRYDFNDIASQYENLCGKSMNREKSRKMQSSNHYPIYDHSEQLFLPAHSAPDSLARVESIVATIRGAYEKRYQMTPEYLSRVPCSVVVSGAFMDHLGLPVLGFATDVCSCVA 494          
BLAST of Gchil1599.t1 vs. uniprot
Match: C1N7G7_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N7G7_MICPC)

HSP 1 Score: 228 bits (582), Expect = 4.820e-64
Identity = 133/317 (41.96%), Postives = 179/317 (56.47%), Query Frame = 0
Query:  118 KRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLG--GTNSIEKGSKEGNGDPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWVK 432
            KRK A+FL Y G+ Y GMQ NPG +TIE  L      AG ISD N     KVQWMRAARTDKGVSA+ QCVS+++      I    VI+ +N  LPE  + +G  R TGGFNA++ C RRRYEY+ PV+       NS +        +    R+  IL  + GTH F NFT  +S  E ++ RY+IS +CS PF     G+ +V   + GQSF+LHQIRK++G+ L V  G   EE    AL     ++ P AP LGL L   ++  YN R+  T   P+S +   ++   FK   +Y  +A  E EE+ +E W++
Sbjct:    1 KRKVAIFLAYVGKGYQGMQRNPGAVTIEDELEKAIVAAGGISDLNAGDFAKVQWMRAARTDKGVSAVGQCVSLRMV-----IDPPGVIDRVNAALPEGFEFFGYERVTGGFNAKTMCDRRRYEYVVPVKAFDPRAKNSDDASPPFEFDETMRQRVNKILGNYVGTHNFHNFTVRVSPDEPSAMRYIISFDCSAPFVV--DGVAFVRCVVVGQSFMLHQIRKLIGMMLGVIRGAWSEEDQLFALNTKESVNVPMAPELGLFLCECIYHAYNVRYAST-HPPLSLENHRDKVETFKRVHIYPHMARTETEEQTMENWIR 309          
BLAST of Gchil1599.t1 vs. uniprot
Match: A0A5B8MCV0_9CHLO (tRNA pseudouridine synthase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCV0_9CHLO)

HSP 1 Score: 228 bits (581), Expect = 2.140e-62
Identity = 147/374 (39.30%), Postives = 206/374 (55.08%), Query Frame = 0
Query:  115 RIRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTNSIEKGSK-----EGNGDPRAA---------------RLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWVKSCRDRFQYNHDEILELHHKFVLTDVGK---EEQRKA 465
            +++KRK A+++GY G  Y GMQ NPG  TIE VL    H AG ISD+N     K+ WMRAARTDKGVSA    VS+K+ L  E I +R     IN  LP+D++V+G  R T GF AR  C RRRY Y+ P+  L  ++ + +G+K     EG+G   A                R   ILK +EGTH F +FT+G + +E  ++RY+++   ++ F+   +G  YV  E+ GQSFL HQIRKM+GL+L +    APE  + +AL    K + P AP   L L+  VF +YNK+  H L   +S D F +    FK   + R I E E     + TW++  +D   Y   +   +H +F  +  GK   EE R+A
Sbjct:   71 KMKKRKVALYIGYYGAAYQGMQRNPGAHTIEDVLEKAIHEAGGISDNNFGELQKISWMRAARTDKGVSAACNVVSLKMVLEPEGIVER-----INEKLPDDVRVFGYFRVTNGFCARKMCDRRRYGYVLPLWALDPSHPV-RGNKRQKTSEGSGPGGATTGEETGRAREEEILERFNRILKEYEGTHNFHSFTKGKAWNEPQAQRYILNWK-TETFE--LNGETYVKCEVLGQSFLYHQIRKMIGLALAISRNIAPESVLGLALASRKKFNVPVAPEFPLYLEECVFNSYNKKHGH-LHGDLSRDRFVDTINDFKRTTIDRNIVESEEFNDDVSTWLRGLKDEL-YQFSKWEAIHAEF--SGNGKKSPEETREA 431          
BLAST of Gchil1599.t1 vs. uniprot
Match: I0Z8C0_COCSC (Pseudouridine synthase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z8C0_COCSC)

HSP 1 Score: 223 bits (568), Expect = 4.440e-62
Identity = 131/308 (42.53%), Postives = 178/308 (57.79%), Query Frame = 0
Query:  117 RKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRL-LGGTNSIEKGSKEGNGDPR-----AARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDTFEEERLKFKTQKVYRRIA 418
            +KRK AVF+ + G  Y GMQ NPG  TIE  L +  ++AG ISD+N     KVQW RAARTDKGVSA    VS+K+      I     +  IN HLPE I+V G  R T  F+AR  C RRRYEYI P  + + G  +       G+   R      ARL  +L  FEGTH F N+T  + +S+ A+KRY++S  C+        G  +V + + GQSF+LHQIRK+VG ++ V  G A  + I++AL P+  + TP AP LGL LD  VFE+YN R+ +  E  +    F+++   FK +++Y  IA
Sbjct:    1 KKRKVAVFVAFVGAGYSGMQHNPGCKTIEGELGSAMNKAGAISDENAGDFSKVQWNRAARTDKGVSAAGNVVSLKM-----MIAFPDTVERINSHLPEQIRVLGFTRVTNSFDARKHCDRRRYEYILPAFITIDGAAAAAAAEAAGSRQCRFSAEQQARLNEVLGAFEGTHSFHNYTVRVPASDPAAKRYILSFKCAGTMN--LEGQQWVRMVVVGQSFMLHQIRKLVGTAVAVMRGVATPDAITLALDPARVVVTPMAPELGLFLDECVFESYNDRWGNDREACVRLAAFQDQVDAFKRERIYPHIA 301          
BLAST of Gchil1599.t1 vs. uniprot
Match: A4S9Q6_OSTLU (PseudoU_synth_1 domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9Q6_OSTLU)

HSP 1 Score: 219 bits (557), Expect = 1.250e-60
Identity = 132/317 (41.64%), Postives = 176/317 (55.52%), Query Frame = 0
Query:  117 RKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTNSIEKGSKEGNG--DPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWV 431
            +KRK AV   Y G  Y GMQ NPGV TIE  L     RAG ISD N     KVQW RAARTDKGVSA+ Q V++K+ L         ++  IN  LPE  +V+G+ R TGGFNA++ C RRRYEY+ P R        E G+ E     +   +R+  +LK + GTH F N+T  +  ++  +KRY+IS  CS PF+    G  +V  ++ GQSF+LHQIRK++G  L V  G   E+    AL     + TP AP LGL L   +++ YN +F    E       + E    FK   VY  IA++EREE  ++ W+
Sbjct:    1 KKRKCAVTFAYVGAGYAGMQRNPGVRTIEGELEGAIARAGGISDANAGDFAKVQWTRAARTDKGVSAVGQVVALKMVL-----EPSGMVERINAALPERFEVFGIDRVTGGFNAKTMCDRRRYEYVIPTRAFDPNLGAE-GAAEAFAFTEETRSRVDGVLKNYCGTHNFHNYTVKVKPTDAQAKRYIISFECSAPFEV--EGEQFVRCQVVGQSFMLHQIRKLIGTMLAVVRGELTEDDQKFALLTHEFVPTPMAPELGLFLCECIYKAYNDKFGGVHEN-FELAKYSERSESFKQTHVYPHIAKQEREESTMQNWI 308          
BLAST of Gchil1599.t1 vs. uniprot
Match: A0A2J7PLN4_9NEOP (tRNA pseudouridine synthase A, mitochondrial n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PLN4_9NEOP)

HSP 1 Score: 219 bits (557), Expect = 4.830e-59
Identity = 131/320 (40.94%), Postives = 183/320 (57.19%), Query Frame = 0
Query:  115 RIRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTNSIEKGSKEGNGDPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRF-KHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWVKS 433
            R++KRK A+ L Y+G+ Y GMQ NPG+ TIE+ LLT   +A  I+++  N+P  +Q+ RAARTDKGVSA  Q VS+KL        + S +  IN HLPE I V  + R T GFN++SSC  R Y YI P      +N +E              + S LK FEGTH F NFT      + ++ RY++S    +PF     G+ +  + + GQSF+LHQIRKMVGL++ V  G A   TI  A   + +L  P AP LGL+L+ + +E YN+RF K  + +P+     E E   FK   +Y  I E E EE+ + TW+++
Sbjct:   61 RVKKRKVALLLAYSGQGYLGMQRNPGMKTIEEDLLTALLKASFITEEAFNTPQLIQFQRAARTDKGVSAARQVVSIKLP-------EDSKVEMINNHLPEQIHVLAVKRATKGFNSKSSCDARTYSYILPTFAFAPSN-VEPSESYRITSEVMDSVRSTLKIFEGTHNFHNFTARKKPLDPSANRYIMSFEMGEPFIC--KGLEFSELRVKGQSFMLHQIRKMVGLTIAVARGLASVHTIHRA-WKTERLDLPVAPGLGLILEEVHYERYNQRFGKDGIHEPLDWSEVEAEVTAFKENFIYPTITESEVEEKSMMTWLET 369          
BLAST of Gchil1599.t1 vs. uniprot
Match: A0A1S3HCG7_LINUN (tRNA pseudouridine synthase A isoform X1 n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HCG7_LINUN)

HSP 1 Score: 219 bits (558), Expect = 7.790e-59
Identity = 135/389 (34.70%), Postives = 214/389 (55.01%), Query Frame = 0
Query:   94 DEMNGKISNTGGLDSRDVDSRRIRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLTGFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIHDRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGGTN-SIEKGSKEGNGDPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRYMISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAPEETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRF-KHTLEQPISSDTFEEERLKFKTQKVYRRIAEKEREERILETWVKSCRDRFQYNHDEILELHHKFVLTDVGKEEQRKAYVASLYPIRTTLQEF 480
            DE   K+   G  +     S  +RKRK A+ L Y+G  Y GMQI   V TIE  L++  ++AG+I +++     K+++ RAARTDKGVSA +Q  S+K+ LP       + I  IN  LP  I+V+ + R T GFN++++C  R Y Y+ P         ++ +  K  +   + AR   +L  F+GTH F NFT G  +++ ++KRY+I + C +PF   Q G+ +++V + GQSF+LHQIRKM+GL++ V  G A +E++  A     K+  P AP LGLLL+ L ++ YNKR+ K  L + +  +    +  KFK +++Y  I + E +E+ +  W+++            L LH     T +  EE+       L  + T ++EF
Sbjct:   92 DERACKVPKLGTDEHHPSPSNILRKRKVALLLAYSGSGYMGMQIQKDVTTIETDLVSALYKAGVIPEEHAEEMQKMKFQRAARTDKGVSAAMQLCSLKMLLPE------NCIEKINERLPAQIKVFSIKRVTQGFNSKNNCDNRTYSYLMPTYAFTPVEQNVTEDFKISDDSLKLAR--EVLSMFKGTHNFHNFTAGKKATDPSAKRYIIDIQCGEPFV--QEGLEFITVTVRGQSFMLHQIRKMIGLTIAVVRGLAAKESVQQAF-EHPKMDIPKAPGLGLLLEKLHYDAYNKRYGKDGLHETLDWEDIRMDLDKFKAEQIYPTIIQTELKEKSMLQWLQT------------LHLH-----TFMQSEEEYGVETPKLRDVWTKVKEF 452          
The following BLAST results are available for this feature:
BLAST of Gchil1599.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFH2_9FLOR0.000e+068.46tRNA pseudouridine synthase A, mitochondrial n=1 T... [more]
R7QUC6_CHOCR0.000e+058.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZYH9_9RHOD1.270e-9029.61Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1ET85_9RHOD1.690e-7737.56Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
C1N7G7_MICPC4.820e-6441.96Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
A0A5B8MCV0_9CHLO2.140e-6239.30tRNA pseudouridine synthase n=1 Tax=Chloropicon pr... [more]
I0Z8C0_COCSC4.440e-6242.53Pseudouridine synthase (Fragment) n=1 Tax=Coccomyx... [more]
A4S9Q6_OSTLU1.250e-6041.64PseudoU_synth_1 domain-containing protein (Fragmen... [more]
A0A2J7PLN4_9NEOP4.830e-5940.94tRNA pseudouridine synthase A, mitochondrial n=2 T... [more]
A0A1S3HCG7_LINUN7.790e-5934.70tRNA pseudouridine synthase A isoform X1 n=3 Tax=L... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000705GalactokinasePRINTSPR00473GALCTOKINASEcoord: 515..533
score: 67.11
coord: 612..630
score: 44.47
coord: 826..840
score: 42.67
NoneNo IPR availablePRINTSPR00959MEVGALKINASEcoord: 895..912
score: 54.74
coord: 619..641
score: 37.08
coord: 662..681
score: 29.56
coord: 513..537
score: 52.35
NoneNo IPR availableGENE3D3.30.70.3170coord: 701..925
e-value: 7.1E-104
score: 349.7
NoneNo IPR availableGENE3D1.20.1440.340coord: 728..875
e-value: 7.1E-104
score: 349.7
NoneNo IPR availablePIRSRPIRSR001430-2PIRSR001430-2coord: 168..376
e-value: 1.6E-27
score: 94.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availablePANTHERPTHR11142:SF4TRNA PSEUDOURIDINE SYNTHASE Acoord: 110..441
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 497..700
e-value: 7.1E-104
score: 349.7
IPR006204GHMP kinase N-terminal domainPFAMPF00288GHMP_kinases_Ncoord: 615..682
e-value: 2.1E-9
score: 37.5
IPR019539Galactokinase, N-terminal domainPFAMPF10509GalKase_gal_bdgcoord: 499..543
e-value: 8.8E-17
score: 60.4
IPR013750GHMP kinase, C-terminal domainPFAMPF08544GHMP_kinases_Ccoord: 854..906
e-value: 3.6E-7
score: 30.5
IPR001406Pseudouridine synthase I, TruATIGRFAMTIGR00071TIGR00071coord: 119..376
e-value: 2.8E-44
score: 149.5
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 110..441
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 274..377
e-value: 6.0E-9
score: 36.4
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 109..234
e-value: 1.0E-28
score: 101.8
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 235..445
e-value: 3.1E-45
score: 156.2
IPR019741Galactokinase, conserved sitePROSITEPS00106GALACTOKINASEcoord: 515..526
IPR041708Pseudouridine synthase PUS1/ PUS2-likeCDDcd02568PseudoU_synth_PUS1_PUS2coord: 125..381
e-value: 7.87655E-84
score: 268.327
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 486..702
IPR036554GHMP kinase, C-terminal domain superfamilySUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 724..933
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 117..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1127508..1130408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1599.t1Gchil1599.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1127508..1130408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1599.t1 ID=Gchil1599.t1|Name=Gchil1599.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=967bp
MGSYFSRTTGAGEDSKRNAELPNSELLSDEHIQRPWKKRRVNEKRKRIDK
STAPPTRAMKDAPLGHRNTEGLEMGNSKALMALSNESRNLDSLDEMNGKI
SNTGGLDSRDVDSRRIRKRKYAVFLGYNGERYYGMQINPGVITIEQVLLT
GFHRAGLISDDNKNSPGKVQWMRAARTDKGVSAIVQCVSVKLELPNERIH
DRSVINSINYHLPEDIQVYGLLRPTGGFNARSSCHRRRYEYIFPVRLLGG
TNSIEKGSKEGNGDPRAARLTSILKRFEGTHCFANFTEGLSSSEDASKRY
MISLNCSQPFKPPQSGIYYVSVEIFGQSFLLHQIRKMVGLSLYVYLGHAP
EETISVALCPSVKLHTPTAPALGLLLDNLVFENYNKRFKHTLEQPISSDT
FEEERLKFKTQKVYRRIAEKEREERILETWVKSCRDRFQYNHDEILELHH
KFVLTDVGKEEQRKAYVASLYPIRTTLQEFLESDSEDMMKMAMDLRKMFE
ERYGVTPSFMARAPGRVNLIGEHLDYNGFPVIGIALRQGSMLAGCLDNTD
VIEIQHARNDLFQSGKLRADGLRMVLEEENETLDSDWIQYVSWGVKPVYN
SIAKGKRSVSGGGRLLVSGDLPLAAGLASSSSLVTLSALATARLNRKRFP
KQELALLAAEGERVGAGTRGGAVDHVISACGGKECATSVSFIPRVNVKSL
RLPKSASLIAVGSHVKARKGFDSFVKDQFNLRAAECRIASGILARRLKVH
FEMSVTTPGQLYFQAKRTSKLQCRTISALRKMTQEVMDITEIVSLDDAKK
ELGVTEVELRNRFLVGVEAECFATGKRMAHVLSEAERVENFAAVLNDEDC
DEQEKLQRLGSILQEGHESLRMHYESSCVEVDELVEFCLANGAIGSRITG
AGWGGYTINLVPIEKKGPFMESVKGKVGRESVIDIEPSAGICLFAIHSTL
GGSSQKTENTATGAEE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000705Galactokinase
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR006204GHMP_kinase_N_dom
IPR019539GalKase_N
IPR013750GHMP_kinase_C_dom
IPR001406PsdUridine_synth_TruA
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020094TruA/RsuA/RluB/E/F_N
IPR020095PsdUridine_synth_TruA_C
IPR019741Galactokinase_CS
IPR041708PUS1/PUS2-like
IPR020568Ribosomal_S5_D2-typ_fold
IPR036554GHMP_kinase_C_sf
IPR020103PsdUridine_synth_cat_dom_sf