Gchil1584.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1584.t1
Unique NameGchil1584.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length360
Homology
BLAST of Gchil1584.t1 vs. uniprot
Match: A0A2V3IJ21_9FLOR (C2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ21_9FLOR)

HSP 1 Score: 438 bits (1127), Expect = 5.640e-151
Identity = 223/361 (61.77%), Postives = 280/361 (77.56%), Query Frame = 0
Query:    1 MKLIELFLSASISAKHSDTEAPTFAVVLRRDAFGTEFEELGRTETIAQSDPLLFFTSFTVSYNERLADETVLRFELYERKTDDTEKLREHDHLAKATLSLPDLILAPGNHLTTQLSHPTIEEKVGVLTISAEEVDASNQENQSDVLFDLSSNVLRKKDWNKTLLHQRYELKRAHKHEDTEGHTVWLPIHKSDRIGKQRYSNTIIEFSTTNLKYRHLCNGDDERRLKISLYVNSPTIKRTTTESLLGSVQFCLRDICELDPTQEVLPLEGGGDGDEDVGHVSILKAEPTDYGSHFALRVNFEH-QKYSTGGSQEKRKLVNMTKKRLSMSK-LSIG-RGKSSQNGPKLPALNSIENLFKQQPT 358
            MKLIELFLS    A  ++    TFAV+ ++D    +F ELGRTET+ QSD   + TSF V YN+R ADET+LR E+Y+RKT+ TE+L++HD  AKAT+S+PD+++APGNHLTTQLSHP++E+KVGVLT+SAE+VDA   EN SDVL D+S+ VLR++DWNKT+L QRYEL RAH HED EGHTVWLPIHKSDRIGKQR SNT IEFST ++KYRHLCNGDDERR++IS+Y    + KR  TE+L+G   F LRDICELDPT+EVL LE  GD  E++GHVSI+KAEPTDYGSHF+L VN+E+  +Y   GS+EKRK V   KKRLS++K LS+  + KS+    ++  L  ++NLF  QPT
Sbjct:    1 MKLIELFLSCDTLAHLTEKPLRTFAVLFKKDGHDRDFTELGRTETVCQSDSPHYCTSFEVPYNQRAADETILRVEIYQRKTEQTERLKDHDFFAKATISMPDVLMAPGNHLTTQLSHPSLEKKVGVLTLSAEQVDADRAENNSDVLIDMSACVLRRRDWNKTILCQRYELHRAHNHEDMEGHTVWLPIHKSDRIGKQRDSNTTIEFSTVSVKYRHLCNGDDERRMRISMYSTPQSNKRPCTEALIGLAIFTLRDICELDPTEEVLQLERIGDDCEELGHVSIVKAEPTDYGSHFSLHVNYENTSRYCIAGSEEKRKQVKKMKKRLSITKRLSLSSKDKSNPASTRICDLGGVDNLFTHQPT 361          
BLAST of Gchil1584.t1 vs. uniprot
Match: A0A6A7G4L2_9CRUS (Copine-3-like isoform X2 n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G4L2_9CRUS)

HSP 1 Score: 63.9 bits (154), Expect = 1.860e-7
Identity = 68/267 (25.47%), Postives = 119/267 (44.57%), Query Frame = 0
Query:    4 IELFLSASISAKHSDTEAPTFAVVLRRDAFGTEFEELGRTETIAQSDPLLFFTSFTVSYNERLADETVLRFELYERKTDDTEKLREHDHLAKATLSLPDLILAPGNHLTTQL-----SHPTIEE-KVGVLTISAEEVDASNQENQSDVLFDLSSNVLRKKDWNKTLLHQRYELKRAHKHEDTEGHTVWLPIHKSDRIGKQRYSNTIIEFSTTNLKYRHLCNGDDERRLKISLYVNSPTIKRTTTESLLGSVQFCLRDICELDPTQEV 264
            IE+++  S    H         VVL       +FE++GR+ETI  S+   F T F + Y     +   +R E+Y+  T  ++KL E D +  A   + +++ +PG  +T  +       P ++  K   +T+S EE+  +N      V  +L++  L K D   +      E+ R+   ED      W+ IHK++ I     +N    +   ++  + LCNGD  R L I  +       R +   L+G  Q  + D+ E + +Q +
Sbjct:    9 IEIYVQCSNLVSHDLLSKSDPFVVLYLRGISGQFEQIGRSETIKNSENPKFSTQFKIEYF--FEENQEIRVEIYDTDTA-SQKLSEQDFIGNAVFPVGEMVASPGQAVTKAIFAKGSKKPIMQHSKPSTVTLSCEEISLTNDL----VYLNLAATGLPKMDMFGSA-DPYLEIFRSR--EDGS----WIKIHKTEVIK----NNPNPTWKQISISSQQLCNGDYARPLLIKCF----DWDRNSDPDLIGQCQCSVNDMKENNFSQSL 253          
The following BLAST results are available for this feature:
BLAST of Gchil1584.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJ21_9FLOR5.640e-15161.77C2 domain-containing protein n=1 Tax=Gracilariopsi... [more]
A0A6A7G4L2_9CRUS1.860e-725.47Copine-3-like isoform X2 n=2 Tax=Hirondellea gigas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..359
NoneNo IPR availablePANTHERPTHR10857:SF106COPINE-8coord: 4..285
IPR045052CopinePANTHERPTHR10857COPINEcoord: 4..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1070007..1071086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1584.t1Gchil1584.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1070007..1071086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1584.t1 ID=Gchil1584.t1|Name=Gchil1584.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=360bp
MKLIELFLSASISAKHSDTEAPTFAVVLRRDAFGTEFEELGRTETIAQSD
PLLFFTSFTVSYNERLADETVLRFELYERKTDDTEKLREHDHLAKATLSL
PDLILAPGNHLTTQLSHPTIEEKVGVLTISAEEVDASNQENQSDVLFDLS
SNVLRKKDWNKTLLHQRYELKRAHKHEDTEGHTVWLPIHKSDRIGKQRYS
NTIIEFSTTNLKYRHLCNGDDERRLKISLYVNSPTIKRTTTESLLGSVQF
CLRDICELDPTQEVLPLEGGGDGDEDVGHVSILKAEPTDYGSHFALRVNF
EHQKYSTGGSQEKRKLVNMTKKRLSMSKLSIGRGKSSQNGPKLPALNSIE
NLFKQQPTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045052Copine