Gchil1533.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1533.t1
Unique NameGchil1533.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length435
Homology
BLAST of Gchil1533.t1 vs. uniprot
Match: A0A2V3ISY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISY8_9FLOR)

HSP 1 Score: 363 bits (931), Expect = 3.760e-119
Identity = 194/412 (47.09%), Postives = 258/412 (62.62%), Query Frame = 0
Query:    1 MIWNTLRAREVGKSASKDLVWRAELNTLSTLQLKPTWNTQFKPVARGCRDYIVQFSASQDEALLAAASSNGMIEIHEPDDSDSLRLRLRSNHSSKVAACTWGKGRGDHLYVAHEAGTIHQYDLNQCDPNAPTNAISNLGNKRHLTDIISLEPNVFAVAHHELLHMYDIRESWRRKISTTTRIGKEIAVAGDGLELYIASPGNISLYDRRQLPQGRAFLSMERSGKNIVLQRHLPEHSRLDMLRILMGAPRGFLFYRTAKGTAGYIDMLGKESGEHITPAH----PPVFADSSQVSLGETGLQSYGTLRQSYDL------------SWHVRRRLGDVVCGAHGTGWRAIFPQTFRSSFEVILFGHGRPMESYERSLGNEIASMYAIGRKLGRILIGGIRNEMQLLEVDCSLTP 396
            M    L+ARE+G+  S  +  R EL  L+ L+++  W T+F P+    RDYIVQ S SQD ALLA ASSNG IEIHEP+DSDS+RL L S+  S++AACT+ +   D + VAHE G +H YDLN C+ +  T A      KRH++DI+SL+ NVFAVA  + + +YD R       +  TR+GK+ A  G+ LELY+AS G ISLYDRR+L      +SMER     VL+R + E  RL+MLR+L GAP+G LFY    GT G++D+LG    EHI  +     PP+ A +      + GLQ YGTL QS+ L            SW+VRRRLGDVV  AHG+GW AIFP  ++ +FEV+LFGHG  M+S+ER +  + + M  +G  L RI++GGI N++  L VD S  P
Sbjct:    1 MALRALKARELGEPLSNKVTLRIELKCLAHLRMQNKWTTRFVPITPATRDYIVQVSPSQDGALLAVASSNGRIEIHEPEDSDSMRLSLFSSAWSRIAACTFSRSPHDTILVAHENGNVHLYDLNTCENSTATRAFKQEAAKRHVSDILSLDKNVFAVARDDFVFLYDSRLRSSAACTAQTRVGKDAAFVGEDLELYVASQGVISLYDRRRLRAPSKLISMERKESPCVLRREISESGRLNMLRMLPGAPQGHLFYHAVNGTTGHVDILGSGQ-EHIKVSRQVERPPLPAPNPD----DPGLQEYGTLEQSFSLQIXXXXXXSLEPSWYVRRRLGDVVRAAHGSGWIAIFPHLYKPAFEVVLFGHGSAMQSFEREMDYQASCMQTVGGTLRRIVVGGIDNQVDTLAVDTSRRP 407          
BLAST of Gchil1533.t1 vs. uniprot
Match: R7QSJ7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSJ7_CHOCR)

HSP 1 Score: 141 bits (355), Expect = 7.240e-34
Identity = 123/417 (29.50%), Postives = 193/417 (46.28%), Query Frame = 0
Query:   11 VGKSASKDLVWRAELNTLSTLQLKPTWN----TQFKPVARGCRD----YIVQFSASQDEALLAAASSNGMIEIHEPDD--SDSLRLRLRSNHSS------KVAACTWGKGRG-DHLYVAHE-AGTIHQYDLNQCDPNAPTNAI--SNLGNKRH-----LTDIISLEPNVFAVAHHE-LLHMYDIRESWRRK--ISTTTRIGKEIAVAGDGLELYIASPGNISLYDRR-----QLPQGRAFLSMERS--GKNIVLQRHL--PEHSRLDMLRILMGAPRGFLFYRTAKGTAGYIDMLG-KESGEHITPAHPPVFADSSQVSLGETGLQSYGTLRQSYDLSWHVRRRLGDVVCGAHGTGWRAIFPQTFRSSFEVILFGHGRPMESYERSLGNEIASMYAIGRKLGRILIGGIRNEMQLLE 389
            +G   S+   WRA+L +L  LQ  P+ N    T F   ARG  +    +I Q S S D  LLA ASS+ ++E+HEP D   +SLRL L   H        K +   W    G + + +A E    +  +DL  C  + PT  I  ++   +R+     ++D+  ++   FAV+ +  ++ +YD+R S R+   I+T    G+   +   G+ +Y +   +I ++DRR     Q+   ++F     S  G+  V    +   E  R   L+ L GA  G + Y+T+ G  G++DM   K + EHI    P       +    ETGL  YGT  +     WHVRRR  DV  G  G GWR + P    +   VI FG G    S         + ++AI  +  + ++GG    ++ +E
Sbjct:   21 LGGDVSESFCWRAQLASLRCLQ--PSSNGLQPTSFTATARGAWEKRHRHIAQLSPSPDGGLLAVASSDAVVEVHEPGDRTGESLRLTLEPVHDRMPRTNLKFSGAAWLAPAGAESVVMAFENLPQMWLFDLQTCSLDRPTTKIRLASTTTQRNSIDAGVSDVARVDDYCFAVSLYSGMIQVYDVRASHRKNDGIATLCATGRFSVIDTQGMYIYRSGGDSIHMHDRRMLRPIQVGSIKSFGGRHSSAGGEQEVASVTIGNDEDRRPSFLKALPGAAPGCVMYQTSGGAVGHVDMAASKHALEHI----PEESITLKRPRPIETGLDEYGTASEMMHQPWHVRRRHCDVKVGPLGQGWRVVAPIAHGAGVRVITFGPGVKTRSMRLWRKGYYSCVHAINSQFDKFILGGSDCTLETIE 431          
The following BLAST results are available for this feature:
BLAST of Gchil1533.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISY8_9FLOR3.760e-11947.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSJ7_CHOCR7.240e-3429.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 43..237
e-value: 1.5E-9
score: 39.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..434
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 41..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:800678..801982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1533.t1Gchil1533.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 800678..801982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1533.t1 ID=Gchil1533.t1|Name=Gchil1533.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=435bp
MIWNTLRAREVGKSASKDLVWRAELNTLSTLQLKPTWNTQFKPVARGCRD
YIVQFSASQDEALLAAASSNGMIEIHEPDDSDSLRLRLRSNHSSKVAACT
WGKGRGDHLYVAHEAGTIHQYDLNQCDPNAPTNAISNLGNKRHLTDIISL
EPNVFAVAHHELLHMYDIRESWRRKISTTTRIGKEIAVAGDGLELYIASP
GNISLYDRRQLPQGRAFLSMERSGKNIVLQRHLPEHSRLDMLRILMGAPR
GFLFYRTAKGTAGYIDMLGKESGEHITPAHPPVFADSSQVSLGETGLQSY
GTLRQSYDLSWHVRRRLGDVVCGAHGTGWRAIFPQTFRSSFEVILFGHGR
PMESYERSLGNEIASMYAIGRKLGRILIGGIRNEMQLLEVDCSLTPSPLH
NPRRTEPKAPPRTWWSRMRDENDSDMTRDNEELT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf