Gchil1526.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1526.t1
Unique NameGchil1526.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length465
Homology
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A2V3IT02_9FLOR (Cyclin-P3-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT02_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 2.770e-37
Identity = 94/225 (41.78%), Postives = 126/225 (56.00%), Query Frame = 0
Query:  153 EIQQQPHFRYEAAASHPSSPSAHCVEHSPQFSPGAVSPPIGAASXXXXXXXXXXXXXRTHHQWCERDVVTAVCALLHQWCRGTESI--TGHHASPQHQLKYHAFFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTMLHVLRWDAACPLLRYQLMERRLLQTL 375
            +    P F Y  +A+ P  P  H    SP FS            XXX            HH W +  +V+A+CA L   C   E    T H  +     KYH FFSQYRQPF L FYV RLVQ+ N S SAFI+AL ++ +V++    L +++MN+HRL  TALVLAIK +DD++FSNAYYARVAG++  E+N+LE++ML +L W  +     +   +  LLQ L
Sbjct:   63 QTHHSPSFHYSLSAASP--PHHHIYPSSPSFSXXXXX-----XXXXXPLQPYPEHQFLHHHDWNDDQLVSALCAHLSAVCHRNEQAADTPHTTNSD---KYHHFFSQYRQPFHLTFYVTRLVQYSNTSPSAFILALIYLEKVKSVAPQLALTDMNLHRLVSTALVLAIKYLDDQVFSNAYYARVAGVTTAEINQLELSMLTLLNWQLSVSTSTFSAHQHNLLQQL 277          
BLAST of Gchil1526.t1 vs. uniprot
Match: UPI001E1D6F52 (cyclin-U4-1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6F52)

HSP 1 Score: 130 bits (327), Expect = 9.120e-32
Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 0
Query:  254 FFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTMLHVLRWDAACPLLRYQLMERRL 371
            F+S ++QPF L FYV+RLVQ+ NCS SAF+VA+ ++ R+Q     LR+S MN HRL   ALVLAIK +DDE++SNAYYARV G+S  E+N LE +ML +LRW+ +     Y L E  L
Sbjct:   60 FYSAFKQPFSLEFYVQRLVQYTNCSTSAFVVAMIYLDRLQQHAPGLRLSFMNCHRLLIVALVLAIKYLDDEIYSNAYYARVGGLSTSEMNRLEASMLELLRWNVSVSAELYNLFEESL 177          
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A7S0BL77_9RHOD (Cyclin n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL77_9RHOD)

HSP 1 Score: 101 bits (251), Expect = 3.750e-21
Identity = 51/110 (46.36%), Postives = 77/110 (70.00%), Query Frame = 0
Query:  248 QLKYHAFFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISC-EELNELEVTMLHVLRWD 356
            + K   F+S ++Q F L FY++RL+ +C CS SAF++ L ++ RV +    + +SE N+HRL  TALVLA K ++DE+ +N+YYARV GIS  +E+N+LE  ML +L +D
Sbjct:   75 EAKVGIFYSSHKQSFSLAFYIRRLIDYCGCSNSAFVLMLVYMDRVLSLQPLISLSEYNIHRLTMTALVLATKYLEDEVRTNSYYARVGGISTMKEMNKLEGAMLSILNFD 184          
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A1X6NRH4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRH4_PORUM)

HSP 1 Score: 105 bits (261), Expect = 1.410e-20
Identity = 62/156 (39.74%), Postives = 88/156 (56.41%), Query Frame = 0
Query:  222 TAVCALLHQWCRGTESITGHHASPQHQLKYHAFFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGI-SCEELNELEVTMLHVLRWDAACPLLRYQLMERRLLQTLA 376
            TA+ ++L +W       +GH   P        FFS  RQPF L +YV+RLV    CS SA++ A  ++ R+     AL V  MNVHRL  +ALV+A+K +DD+++S AYY RV GI S  E   LE T+L +L +  A  +  Y   E+ +L+  A
Sbjct:  357 TAISSVLGRWIDANAHASGHRPPPASDDPLSQFFSSSRQPFTLLYYVRRLVTHTRCSRSAYVAAFVYLDRLAAVAPALAVRSMNVHRLLLSALVVAVKVLDDDVYSAAYYCRVGGIPSVGEYVALEATLLRLLGFRVAVGVDVYHAYEKGILRAAA 512          
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A7S1TIJ0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIJ0_9RHOD)

HSP 1 Score: 92.4 bits (228), Expect = 3.700e-18
Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 0
Query:  222 TAVCALLHQWCRGTESITGHHASPQHQLKYHA-FFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALR-VSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISC-EELNELEVTMLHVLRWD 356
            ++V + L   C+  E +        H+L   + F+S+  Q F L +YV+RL++   CS SAF++AL ++ RVQ +      V E NVHRLF TALVLAIK +D+ ++ N +YARV G+S   E+N+LE  ML VL +D
Sbjct:   39 SSVTSALDYLCKSNEPV----GEVPHELDSASLFYSRASQSFSLDWYVERLIRRAECSRSAFVLALIYLLRVQDKGKEKYFVVERNVHRLFLTALVLAIKFLDEPIYDNGFYARVGGLSSLREMNDLEKEMLRVLNFD 172          
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A7J6KZ49_PERCH (Mitochondrial peripheral inner membrane protein n=2 Tax=Alveolata TaxID=33630 RepID=A0A7J6KZ49_PERCH)

HSP 1 Score: 92.0 bits (227), Expect = 3.960e-17
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 0
Query:  259 RQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTMLHVLRWDAACPLLRYQLMERRLLQTL 375
            R   E+  Y++RL +   CS   F++ L ++ R     +   VS +NVHRL  TAL +A K  DD  +SNA+YARV G+S  ELN LE+T+L ++ W    P   Y++ ER +  TL
Sbjct:  177 RPGIEIGDYIRRLAKHFGCSDEVFVLCLIYIDRAIKRDDTFAVSALNVHRLVLTALTIAAKFHDDIYYSNAFYARVGGVSVSELNTLELTLLKMMDWQCFVPTEEYEMYERSITMTL 293          
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A2I0X1W9_9ASPA (Cyclin n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X1W9_9ASPA)

HSP 1 Score: 88.6 bits (218), Expect = 1.170e-16
Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 0
Query:  220 VVTAVCALLHQWCRGTESITG---HHASPQHQLKYHAFFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTMLHVLRWD 356
            V++ + +LL +     + +T    HH SP   +   AFF   +    +  Y++R+ +F +CS S F+VA  ++ R      ++ V   NVHR   TA++ A+K +DD  ++NAY+A+V GIS  E+N LE+  L  LR+D
Sbjct:   17 VISILSSLLERVANWNDDLTATGLHHYSPASAIS--AFFGLEKPEISIACYLERIFRFAHCSTSCFVVAYIYLDRFLLLHPSISVDSFNVHRFLITAVLTAVKFIDDRCYNNAYFAKVGGISLAEMNHLEIDFLFGLRFD 154          
BLAST of Gchil1526.t1 vs. uniprot
Match: C5LHX8_PERM5 (CYCLIN domain-containing protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LHX8_PERM5)

HSP 1 Score: 89.0 bits (219), Expect = 4.040e-16
Identity = 47/117 (40.17%), Postives = 67/117 (57.26%), Query Frame = 0
Query:  259 RQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTMLHVLRWDAACPLLRYQLMERRLLQTL 375
            R   E+  Y++RL +   CS   F++ L ++ R     +   VS +NVHRL  TAL +A K  DD  +SNA+YARV G+S  ELN LE+T+L ++ W        YQ+ ER +  TL
Sbjct:  169 RPGIEIGDYIRRLAKHFGCSDEVFVLCLIYIDRAIKRDDTFAVSALNVHRLVLTALTIAAKFHDDIYYSNAFYARVGGVSVAELNTLELTLLKMIDWRCFVSTEEYQMYERSITMTL 285          
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A075ATS4_ROZAC (Cyclin PHO80-like domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075ATS4_ROZAC)

HSP 1 Score: 87.8 bits (216), Expect = 7.060e-16
Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 0
Query:  254 FFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTMLHVLRWDAACPLLRYQLMERRL 371
            F SQ    F +  Y +R+ Q+  CS   FI AL ++ RV   C ++ ++ +N+HR+F T++++A K  DD  F+N++YAR+ GISC E+  LE   L  L++D + PL  Y    + L
Sbjct:  110 FHSQCIPKFSIISYFQRISQYALCSNETFIFALIYIDRVLASCPSILLTSLNIHRMFLTSVLIAGKYNDDCFFANSHYARIGGISCTEMTNLEREFLAYLKYDLSVPLSTYDYYTKNL 227          
BLAST of Gchil1526.t1 vs. uniprot
Match: A0A7J6M7K3_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M7K3_PEROL)

HSP 1 Score: 89.7 bits (221), Expect = 2.440e-15
Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 0
Query:  259 RQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALRVSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTMLHVLRWDAACPLLRYQLMER 369
            R   E+  Y++RL +  +CS   F++ L ++ R     +   VS +NVHRL  TAL +A K  DD  +SNA+YARV G+S  ELN LE+T+L ++ W    P   YQ+ ER
Sbjct:  620 RPGIEIGDYIRRLAKHFDCSDEVFVLCLIYIDRAIKRDDTFAVSALNVHRLVLTALTVAAKFHDDIYYSNAFYARVGGVSVAELNTLELTLLKMMDWQCFVPTEEYQMYER 730          
The following BLAST results are available for this feature:
BLAST of Gchil1526.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IT02_9FLOR2.770e-3741.78Cyclin-P3-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
UPI001E1D6F529.120e-3254.24cyclin-U4-1-like n=1 Tax=Mercenaria mercenaria Tax... [more]
A0A7S0BL77_9RHOD3.750e-2146.36Cyclin n=1 Tax=Rhodosorus marinus TaxID=101924 Rep... [more]
A0A1X6NRH4_PORUM1.410e-2039.74Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TIJ0_9RHOD3.700e-1842.03Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7J6KZ49_PERCH3.960e-1740.17Mitochondrial peripheral inner membrane protein n=... [more]
A0A2I0X1W9_9ASPA1.170e-1634.29Cyclin n=1 Tax=Dendrobium catenatum TaxID=906689 R... [more]
C5LHX8_PERM54.040e-1640.17CYCLIN domain-containing protein n=1 Tax=Perkinsus... [more]
A0A075ATS4_ROZAC7.060e-1637.29Cyclin PHO80-like domain-containing protein n=1 Ta... [more]
A0A7J6M7K3_PEROL2.440e-1541.44Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 245..356
e-value: 1.6E-22
score: 80.6
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 209..371
NoneNo IPR availableGENE3D1.10.472.10coord: 208..396
e-value: 8.4E-32
score: 112.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..451
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 199..208
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 268..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:785038..786432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1526.t1Gchil1526.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 785038..786432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1526.t1 ID=Gchil1526.t1|Name=Gchil1526.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=465bp
MPPATATAPPPSRPTRPTKRRLPPATHPDRVAAPCLKRPRPAHTTTTPPK
SATISLVSPPESRTPPSPPPSPLLPCSPSPSPSASPSPLLPPPRRSARKP
RFSSLSNTCSASSAAAAAAAAAAAAAARVVDVITSPRSPRSPRFSPSAAR
LREIQQQPHFRYEAAASHPSSPSAHCVEHSPQFSPGAVSPPIGAASPPPP
PPPPPPPPPRTHHQWCERDVVTAVCALLHQWCRGTESITGHHASPQHQLK
YHAFFSQYRQPFELPFYVKRLVQFCNCSLSAFIVALTFVHRVQTECNALR
VSEMNVHRLFCTALVLAIKNVDDELFSNAYYARVAGISCEELNELEVTML
HVLRWDAACPLLRYQLMERRLLQTLALETACLHAEERGYKQAYRPRAYGC
EYAYGQHDEDEDGHLDEDGHLDEEGHLDLDEHDGDLDEHDGDLDEHDGDL
DEDVVGEPRVTCAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf