Gchil1503.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1503.t1
Unique NameGchil1503.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length166
Homology
The following BLAST results are available for this feature:
BLAST of Gchil1503.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 88..165
e-value: 4.8E-5
score: 25.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..128
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 118..165
score: 9.516701
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 115..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:418046..419282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1503.t1Gchil1503.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 418046..419282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1503.t1 ID=Gchil1503.t1|Name=Gchil1503.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=166bp
MRGTQNRSQKRLKLLPLEFVAIDIVGPFPKSVTGHDTVTIDVDEIHDTVS
IDRVSRVPVRTEPAPVTTERARTVTFDTDDPFAEEAVTDTTSSSAGNNHR
TEPSQPDSANTTQPDSIGIVEQMLDHGLADDPPQGLVYRVRWYGCNAAED
SWEAPNNLPQHFISQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf