Gchil1486.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1486.t1
Unique NameGchil1486.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1715
Homology
BLAST of Gchil1486.t1 vs. uniprot
Match: R7QGB5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGB5_CHOCR)

HSP 1 Score: 565 bits (1457), Expect = 3.160e-174
Identity = 462/1162 (39.76%), Postives = 623/1162 (53.61%), Query Frame = 0
Query:  608 LSPAFADAPSPFNQWQVPRSKAMGHDILSPQTLFSPPKMPTRLGRATARAQVAP-RPAPKLFRSGSSSPQLSVSSTGTRSYGGAEGGSSAPKRPGTSDSSKRGAGPSRPSSNSSGSRRSGSLERQPRAEVEAEPLVSAMKSTSSFSLPPSTSESS-------------------DHRRGSSKSSSPVPTLVRDSRESDLGDENDSLLGRDPMATPQNVQLEPLDDEFDISAFEEALSDRALFQRVEEVLVKTTDYRASQAAMSPDTGSDTNITFDEMGYPERRPIRTRERRQASRGSSATQSPIPSSRHSPVPSPKTPIRTARTSGTNPPASQPKPAKARPSA---VVSAASSTVATPEIXXXXXXXXXXXXXXXXXXXXXXXXXXMYSTPVIPTERRRGVPPTXXXXXXIESLIKKFSDQTPPPESVDSGSRPISTMEPSAGLFQKLISVWQNSDEEGREHGSVRSNILDGGLTPKSMLLQP-SGSGSQESTLPSGDTELGLGRGSASTDSSRGRRPRGVRL-PDKPHHISVENLLSPDEEIHSKLQELREGTSVASYGDSYPDDKEKSWVEEARASVECSREGILGGETSATHLLSRSGSVNQASSSIEGSRRITQDAKEGTATAS----------------GTESSQVH-TGSTAINTDGHHVRVDKRRLDWLTRELLAARDSISRKELQMTFAETQRVEQQEILLLEKQDAESVVEAMKRILAEREEELKEARNRLSTTIQNV--STQDRSSLAS-KTSMGGAGENLGQLIRDGHAKLQTRIGEAELKQQKGTDLISNEMQSLWSEVQRAMLEKMVEMTEKRDMELELLRKELESREMQVQNLQVTSSQLVERNRECEAEASEMRLENLKSTHRYELEMSHVTAQVELVNEFSKKLHDNFRETENLRQQVLHYQDKLSHITSTTGVSQRQIKELREAVTRANDECARLRREAELAKKKGWEAIRRAEELEDLRIKDEAAQVAGRYPERRDGSESGSYRSSE----AGRAPRHHGGPGGRYHGLNRTRGAVSSPTPAQKAWLVIKDKIGGIVANRDMGASRRRGHLNPARRDASRTATGSQTS--QTRSRNSNRDEDVISRS----TRSRTSNGSGSSARGGTPRSNTRRTPPSQGSNPYMHSSPHSRGEGQSIRAVGF 1714
            +SP+ +DAP P +QWQ+ R K    D++SPQ LFSPP MP RL R TA  Q+ P + AP LFR+GS  PQLS  S     +          + P     + R    +   S   G    G   + P+   +A    S  + T SF+LPP+ S  S                   D    ++++ +  P+  +D  ES  G       G D     Q  +  P DD FD    +       +F++VEE  V T ++         +  S  N+          R          + GS + +                  R  RT  ++P AS+      R S    V   A + VA                               Y          R VPPT      + +L++ F+ +    ESVD+   P+STM PSAGLFQKLISVW++S+  G ++    +N LD  L       Q  S + +Q+STLPSGDT+L +   +   +S R RR R +R+ P  P H  ++       E  S      E  S+AS+ D++  +KE+S++   +       E I G + SA   LS S S +Q +S +      T  ++E T   S                       H T    + TDG+ +R+D+R LDWLT+ELL ARD +SR+ELQMTF ETQRVEQ+E LLL+KQ+AESVV AM +ILA+RE ELK+AR+RLS  I +V  +TQ RSSLAS + SM    +NL +LI +GHA L +R  E++ K ++  D ++ E + LW+EVQRAM+++M EMTEKRD ELELLR+ELE R+  + NLQ +S  L+ +N   +++ + MR E  ++  RY+LEM+HV AQVELVNEFSKKLHDNFRETENLRQQVL YQDKLSHITST+GVSQRQIKELREAVTRAND+CARLRREA+LAK+KG EA+RRAEELE+LR KD AA  A R+P+R+  ++S SYRS E    AG+      G G RYH   R+RG  +SPTPA+ AWL+IKD+IGGIV  ++  + RRR      RRD  R    SQ+S   +RSR S   ED + RS      SR+S GSGSS R G    +  +  P   +  YM +SP +R E + +RA  F
Sbjct:    1 MSPSGSDAPEPSSQWQIYRQKTHAADVMSPQQLFSPPPMPRRLSRTTAATQMTPPQVAPILFRNGS--PQLSAHSGEGNMF----------EDPQLLSKNSRVPFATAYQSPGGGEHPLGQPLQNPQDGSQAHAQSSVQQRTGSFALPPTASHGSRASQQDGDSPFDETVGPTDDGDNYANQADATDPSFEKDGEESAQG-------GADEYEYDQEEEGAPYDDGFDPDKDD-------VFEKVEEYDVTTPEHEGDNPD-EEEAHSSGNMQQSVSASGSDRADNGPAMAMWTEGSDSNE------------------RIRRTPRSSPSASERSTGSGRGSRHSDVFREAEAMVAADAEYLAPSESAKSPAPRRAVHPSGYPTALQY----------REVPPTPPSPPTVAALVESFTARRHAAESVDAN--PVSTMAPSAGLFQKLISVWRSSELAGIDNADRGTNRLDSSLAAIYRGDQNVSQATTQDSTLPSGDTDL-IPSKTVHAESPRSRRRRAIRMEPGSPVHQDLQRAHEASTE--SGRYSADERGSIASFSDAFSSEKERSFLHTGQGEGYNWDEAIQG-DQSAGIPLSSSASQDQRNSEMR-----TDTSREATPGRSRPPLPXXXXXXXXXXXXXXXXXXHGTQGRTVATDGNVIRIDRRHLDWLTKELLNARDMLSRQELQMTFHETQRVEQEEELLLDKQNAESVVGAMTQILADREGELKDARSRLSVAIDSVGTTTQARSSLASSRNSMSAESQNLNKLITEGHANLHSRFDESDKKGEQIADQMTKETRGLWAEVQRAMVQQMTEMTEKRDEELELLRQELEHRQSLIANLQKSSEDLLSKNTGFQSDITTMRAERQRADQRYQLEMAHVGAQVELVNEFSKKLHDNFRETENLRQQVLQYQDKLSHITSTSGVSQRQIKELREAVTRANDDCARLRREADLAKRKGMEAVRRAEELEELRHKDAAAHSASRFPDRQARTDSSSYRSHEPIRPAGQNRPGGSGSGARYHTATRSRGIAASPTPAKNAWLMIKDRIGGIVTGKESSSLRRRPTGTHVRRDPMRNGPPSQSSGSHSRSRASPGGEDGLPRSRSASVNSRSSRGSGSSLRSGGGSKSGSQVSPIADTRQYMRTSPRTR-EYEPVRAANF 1095          
BLAST of Gchil1486.t1 vs. uniprot
Match: R7QIJ7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIJ7_CHOCR)

HSP 1 Score: 80.1 bits (196), Expect = 2.410e-11
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 0
Query:  121 KNMLPDVRRHALVAHHPPPGAVDTYAPRVADTLPETDIWPALHLAQLVIACAVYGPRHHHFRHSLWRFPTEIVRTTFHASMASVARAVCLPPPEVLYKAGP 221
            + +L  VR  A +  H  PG VD +        P  DI PAL LAQLV+A AVYGP H  +R   W+ PT+ +R + H  + SVA+AV LPPP++LY  GP
Sbjct:  305 RKLLDVVRADANI--HSVPGIVDHFVGNAPAVPPVRDIRPALRLAQLVLAAAVYGPDHT-YRDVFWQLPTDSLRNSLHKCLTSVAQAVELPPPDLLYADGP 402          
The following BLAST results are available for this feature:
BLAST of Gchil1486.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QGB5_CHOCR3.160e-17439.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QIJ7_CHOCR2.410e-1145.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1382..1426
NoneNo IPR availableCOILSCoilCoilcoord: 1277..1315
NoneNo IPR availableCOILSCoilCoilcoord: 1497..1524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 838..1131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1007..1023
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 636..822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1063..1097
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 843..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 866..880
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1662..1705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1549..1594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 561..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 561..596
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1615..1714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1098..1131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 743..778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 669..689
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 881..919
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1634..1648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 578..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1179..1224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:316716..321860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1486.t1Gchil1486.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 316716..321860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1486.t1 ID=Gchil1486.t1|Name=Gchil1486.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1715bp
MATSASKPPRLTETASMILSWLRTAVPSILHNAGHPTTRPANERPAQALA
AVLSDAVVLADILSFLDPMRLPPAAVMRSTARAAMSSPLPVSPTESIANI
DARQRHVQYRNNTRRVVDALKNMLPDVRRHALVAHHPPPGAVDTYAPRVA
DTLPETDIWPALHLAQLVIACAVYGPRHHHFRHSLWRFPTEIVRTTFHAS
MASVARAVCLPPPEVLYKAGPPPSPTVMSPHALPPPMAHYSPHLSPLPLQ
PMSPSCTSSSAHMLSPAYIATPQPLVASHALPTPPSPHYAYSPRTPVHGP
PFSPQHYAAAPPPHVSSSMPISPTPHRPPPPLAAPARPTNASSRADAHFK
SVTTTTTASRAGSSARNPSTHSQPLVRIAERNVPDAPASPLDATALHLST
EDGIGVRKFSLVTQDSGTRSREISPLPAFQGSFSNVQSRSTASEFDDFRN
MSAVTEQGESVGVADMSKSSPLQAQSAPADTTAVDCENQSGGKSSDEFFT
PNESLSETDSQRQSVVSHEFFAITASVPSGAPPAIETSEHYSESKVDEVV
RKAISTSITQQTSRPQLLLPTVSSNSVDHGAERDDDARLNRDSTRTSSFD
FTNPALNLSPAFADAPSPFNQWQVPRSKAMGHDILSPQTLFSPPKMPTRL
GRATARAQVAPRPAPKLFRSGSSSPQLSVSSTGTRSYGGAEGGSSAPKRP
GTSDSSKRGAGPSRPSSNSSGSRRSGSLERQPRAEVEAEPLVSAMKSTSS
FSLPPSTSESSDHRRGSSKSSSPVPTLVRDSRESDLGDENDSLLGRDPMA
TPQNVQLEPLDDEFDISAFEEALSDRALFQRVEEVLVKTTDYRASQAAMS
PDTGSDTNITFDEMGYPERRPIRTRERRQASRGSSATQSPIPSSRHSPVP
SPKTPIRTARTSGTNPPASQPKPAKARPSAVVSAASSTVATPEIKPSAAL
PPLGPDVSSPAIRPSSRKPPMYSTPVIPTERRRGVPPTPPSPPSIESLIK
KFSDQTPPPESVDSGSRPISTMEPSAGLFQKLISVWQNSDEEGREHGSVR
SNILDGGLTPKSMLLQPSGSGSQESTLPSGDTELGLGRGSASTDSSRGRR
PRGVRLPDKPHHISVENLLSPDEEIHSKLQELREGTSVASYGDSYPDDKE
KSWVEEARASVECSREGILGGETSATHLLSRSGSVNQASSSIEGSRRITQ
DAKEGTATASGTESSQVHTGSTAINTDGHHVRVDKRRLDWLTRELLAARD
SISRKELQMTFAETQRVEQQEILLLEKQDAESVVEAMKRILAEREEELKE
ARNRLSTTIQNVSTQDRSSLASKTSMGGAGENLGQLIRDGHAKLQTRIGE
AELKQQKGTDLISNEMQSLWSEVQRAMLEKMVEMTEKRDMELELLRKELE
SREMQVQNLQVTSSQLVERNRECEAEASEMRLENLKSTHRYELEMSHVTA
QVELVNEFSKKLHDNFRETENLRQQVLHYQDKLSHITSTTGVSQRQIKEL
REAVTRANDECARLRREAELAKKKGWEAIRRAEELEDLRIKDEAAQVAGR
YPERRDGSESGSYRSSEAGRAPRHHGGPGGRYHGLNRTRGAVSSPTPAQK
AWLVIKDKIGGIVANRDMGASRRRGHLNPARRDASRTATGSQTSQTRSRN
SNRDEDVISRSTRSRTSNGSGSSARGGTPRSNTRRTPPSQGSNPYMHSSP
HSRGEGQSIRAVGF*
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