Gchil1431.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1431.t1
Unique NameGchil1431.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length219
Homology
BLAST of Gchil1431.t1 vs. uniprot
Match: A0A2V3IME4_9FLOR (Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME4_9FLOR)

HSP 1 Score: 180 bits (456), Expect = 1.630e-50
Identity = 88/183 (48.09%), Postives = 123/183 (67.21%), Query Frame = 0
Query:   35 DGKSWLSIFALFVMFSSLKIVDRRFAVPHPFHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMMKMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMTASLVQESIEAQFESTADLLYCRMDPSDICLLKGGALEKYWEKSIAIDKCHFENPPKYFFSYQSLFEAVDNHQCKY 217
            D  +W+SIF L ++FS++K  DR+F     F  L     R+ R+ H L+K PTLYR R+ALQST  +M++L D ++V +    RQW++N +++ + LFL+LSYEASMTASLVQE++ A F+S  D   CR+ P+++CL  GGALE +W  SIAI+ CH +  P +  SY  LF AVDN  CKY
Sbjct:  168 DRLAWVSIFGLMLLFSAIKFFDRKFCPIDSFEALEETNPRIQRFVHVLMKYPTLYRFRRALQSTFSRMILLPDSDVVENQTANRQWVLNTVISVSGLFLILSYEASMTASLVQETVSAGFQSIQDFQTCRISPAEVCLPGGGALEMFWNTSIAIEVCHKQRQPFFASSYDELFHAVDNRTCKY 350          
BLAST of Gchil1431.t1 vs. uniprot
Match: A0A2V3IMD5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD5_9FLOR)

HSP 1 Score: 174 bits (441), Expect = 1.130e-48
Identity = 86/184 (46.74%), Postives = 130/184 (70.65%), Query Frame = 0
Query:   35 DGKSWLSIFALFVMFSSLKIVDRRFAVPHPFHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMMKMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMTASLVQESIEAQFESTADLLYCRMDPSDICLLKGGALEKYWEKSIAIDKCHFENPPKYFFSYQSLFEAVDNHQCKYA 218
            D  SW++I AL  +F+ LK++D RFAV  P+ PL  + SR+ R  H+L K+P LYRLRKA QS++ ++++  D  +V++G +TRQW +NL++   ALFLVLS+EASMTASLVQE I + +ES  D   C++ PSD+C L+GGALE +W  +IA   CH  NP +Y  +Y+ +++ + + +CK++
Sbjct:  128 DSLSWITIVALTCIFTLLKLLDSRFAVAEPYTPLSGV-SRIRRCLHFLWKHPRLYRLRKAGQSSVTRLMLQPDNEVVDNGKSTRQWFLNLVIGICALFLVLSFEASMTASLVQEKITSTYESPEDFRSCKIPPSDVCALRGGALEMFWNTNIATSNCHNGNPIQYLSTYEEIYDGLASGKCKFS 310          
BLAST of Gchil1431.t1 vs. uniprot
Match: A0A2V3IMD4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD4_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 4.740e-31
Identity = 64/184 (34.78%), Postives = 111/184 (60.33%), Query Frame = 0
Query:   35 DGKSWLSIFALFVMFSSLKIVDRRFAVPHPFHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMMKMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMTASLVQESIEAQFESTADLLYCRMDPSDICLLKGGALEKYWEKSIAIDK-CHFENPPKYFFSYQSLFEAVDNHQCKY 217
            D + WL IF L ++F+++++    F     + PL    + + R  H+L  +P  YRLR ++Q    +M+++ +    +  N T  WI+  ++T   LFL+L+YEASMTAS+VQE++ ++F+S  D   CR+DP D+CL +GG+ + YW + +A ++ CH    P    SY+ +F+ V+N  C++
Sbjct:  168 DSRGWLCIFGLVLLFATIRMFSA-FGDHARYQPLEPTVTPIRRIAHFLYNHPFFYRLRISIQRIFSRMILMPEPEDFSRPNNTFLWILKTVVTICGLFLILAYEASMTASIVQETVTSEFQSGKDFQTCRIDPKDVCLPRGGSFDTYWTEVLAKERPCHKGRSPHLMTSYEEVFQGVENRTCRF 350          
BLAST of Gchil1431.t1 vs. uniprot
Match: A0A2V3IUK7_9FLOR (Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUK7_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 2.070e-27
Identity = 70/185 (37.84%), Postives = 112/185 (60.54%), Query Frame = 0
Query:   35 DGKSWLSIFALFVMFSSLKIVDRRFAVPHPFHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMMKMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMTASLVQESIEAQFESTADLLYCRMDPSDICLLKGGALEKYWEKSIAIDKCHFENPPKYFF--SYQSLFEAVDNHQCKY 217
            D +SWL +FA+ ++F+  K +D RFA P P    PN  +   R  H+L  N    RL  +++ST +++++ SD +IV + +    + +NLI+    L +VLSYEASMTA+LVQE++ + ++S  DL  CR+ P D+C+  G A+  +W  +IA   CH E+  K +F  S++   +AV N  CK+
Sbjct:  166 DLRSWLCLFAIIILFALAKFLDERFA-PIPSADEPNAANSWGRCLHFLRTNWN--RLITSIRSTTLRIVLQSDHDIVQNQHGAHNFNLNLIIGIFGLLVVLSYEASMTATLVQETVVSDYQSVEDLKTCRIKPEDVCVPGGSAVLTFWNDAIAYGDCHRESKGKNYFRGSFEETLDAVKNGTCKF 347          
BLAST of Gchil1431.t1 vs. uniprot
Match: R7QE12_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE12_CHOCR)

HSP 1 Score: 87.8 bits (216), Expect = 2.530e-18
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 0
Query:   20 SNAACVGCSIRVFGTDGKSWLSIFALFVMFSSLKIVDRRFAVP-HPFHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMMKMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMT 142
            S+A+     I  F T    W  I  L  +F+ LK++DRRF  P   + PLP  +SR+ R +HYLLK+   YRLRKALQST+ +M+     + +    ++RQW++NL++   +LFL+L+YEA+MT
Sbjct:   37 SSASAGAFFITAFSTT--VWFFIVGLVCVFTFLKMLDRRFVPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTLSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYEAAMT 158          
BLAST of Gchil1431.t1 vs. uniprot
Match: R7Q0P8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0P8_CHOCR)

HSP 1 Score: 90.1 bits (222), Expect = 3.860e-18
Identity = 50/105 (47.62%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   39 WLSIFALFVMFSSLKIVDRRFAVPHP-FHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMMKMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMT 142
            W  +  L V+F+ LK++DRRF  P   + PLP    RL R RHYLLK+   YRLRKALQST+ +M+  S+ + V D  ++RQW++NL++   +LF++L+YE+SMT
Sbjct:  173 WGLVVMLSVVFTFLKMLDRRFVPPDDSYTPLPASEPRLRRIRHYLLKSRIPYRLRKALQSTLSRMVGFSNSDPVTDKESSRQWVLNLVIACCSLFIILAYESSMT 277          
BLAST of Gchil1431.t1 vs. uniprot
Match: R7Q656_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q656_CHOCR)

HSP 1 Score: 77.0 bits (188), Expect = 5.850e-15
Identity = 41/90 (45.56%), Postives = 63/90 (70.00%), Query Frame = 0
Query:   54 IVDRRFAVP-HPFHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMMKMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMT 142
            ++DRRF  P   + PLP  +SR+ R +HYLLK+   YRLRKALQSTM +M+     + +    ++RQW++NL++   +LFL+L+YE++MT
Sbjct:    1 MLDRRFVPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTMSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYESAMT 90          
The following BLAST results are available for this feature:
BLAST of Gchil1431.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IME4_9FLOR1.630e-5048.09Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IMD5_9FLOR1.130e-4846.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMD4_9FLOR4.740e-3134.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUK7_9FLOR2.070e-2737.84Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gra... [more]
R7QE12_CHOCR2.530e-1841.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q0P8_CHOCR3.860e-1847.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q656_CHOCR5.850e-1545.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 120..137
NoneNo IPR availableTMHMMTMhelixcoord: 38..55
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:1104001..1105656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1431.t1Gchil1431.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 1104001..1105656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1431.t1 ID=Gchil1431.t1|Name=Gchil1431.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=219bp
MTPRSPKNAEDFLFVPSGGSNAACVGCSIRVFGTDGKSWLSIFALFVMFS
SLKIVDRRFAVPHPFHPLPNITSRLLRYRHYLLKNPTLYRLRKALQSTMM
KMLMLSDENIVNDGNTTRQWIVNLILTTTALFLVLSYEASMTASLVQESI
EAQFESTADLLYCRMDPSDICLLKGGALEKYWEKSIAIDKCHFENPPKYF
FSYQSLFEAVDNHQCKYA*
back to top