Gchil1415.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1415.t1
Unique NameGchil1415.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length209
Homology
BLAST of Gchil1415.t1 vs. uniprot
Match: A0A2V3IUJ5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUJ5_9FLOR)

HSP 1 Score: 193 bits (491), Expect = 4.130e-59
Identity = 98/196 (50.00%), Postives = 137/196 (69.90%), Query Frame = 0
Query:   14 PFANHYPQNKTASANKVLNPEDIPLRYGRTFQPFPSPHPSLKFDPIQWYWVPGFSFDIYFILSALAFLLY-LSSMITFISAPRIS-GKLGGGSFLLILAAIVTYLRVNLGINQALRTAICRCYAKSEIAMRIWETADARDHIFHKDVFHSEKSYFYELAVLRDGSVDIRNGNER-IHSEAKTLDIGMQASLNADNF 206
            P +     NK   A ++LN   +PL +GR+ +PFP+PHP + F+P++W+W PGF+FDI FILS +AF+LY L++++ F  +  I+ GK  G +   ILA++V Y+RVN+GINQ LRTAICRCYAK   A+  WE AD RD I+ KDVFH EKS+FY + VLRDGSV++RN  +R I      +++GM A++ AD F
Sbjct:    5 PSSTAQAANKHGDAGELLNSTLVPLHWGRSLKPFPAPHPPVNFNPMEWFWFPGFAFDIRFILSVVAFVLYVLATVVLFAGSGGITAGKSIGATVFFILASVVVYIRVNIGINQVLRTAICRCYAKRNDAVAAWEIADHRDFIYAKDVFHEEKSFFYHIVVLRDGSVEMRNIVDRGIAKGGADIEVGMHANIKADAF 200          
BLAST of Gchil1415.t1 vs. uniprot
Match: A0A2V3INU9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INU9_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 3.350e-48
Identity = 83/175 (47.43%), Postives = 116/175 (66.29%), Query Frame = 0
Query:    7 EAQNDASPFANHYPQNKTASANKVLNPEDIPLRYGRTFQPFPSPHPSLKFDPIQWYWVPGFSFDIYFILSALAFLLYLSSMITFISAPRIS-GKLGGGSFLLILAAIVTYLRVNLGINQALRTAICRCYAKSEIAMRIWETADARDHIFHKDVFHSEKSYFYELAVLRDGSVDIR 180
            + Q  A P       +K     ++LNP ++PL +G T +PFP+PH S+ F P++W W PGF+FD+ F L AL+ +  +S  I   +    S GK  G S L ILA I  +LR+N+ INQ +RTAICRCYAK  +A+ +WE A+ +D I+ KDVFH+EKS+FY++ VLRDGSV+IR
Sbjct:    6 DQQTPAQPATTTQAPHKHGDVGEILNPTEVPLVWGCTLKPFPAPHASVYFHPMKWSWFPGFAFDVRFFLFALSAVSTMSFSIILNTVDNASPGKWVGASVLPILAGIAGFLRLNIAINQTIRTAICRCYAKRAVAIAVWENAEQKDLIYAKDVFHAEKSFFYDIVVLRDGSVEIR 180          
The following BLAST results are available for this feature:
BLAST of Gchil1415.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUJ5_9FLOR4.130e-5950.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3INU9_9FLOR3.350e-4847.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 71..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:846945..847571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1415.t1Gchil1415.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 846945..847571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1415.t1 ID=Gchil1415.t1|Name=Gchil1415.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=209bp
MSASQLEAQNDASPFANHYPQNKTASANKVLNPEDIPLRYGRTFQPFPSP
HPSLKFDPIQWYWVPGFSFDIYFILSALAFLLYLSSMITFISAPRISGKL
GGGSFLLILAAIVTYLRVNLGINQALRTAICRCYAKSEIAMRIWETADAR
DHIFHKDVFHSEKSYFYELAVLRDGSVDIRNGNERIHSEAKTLDIGMQAS
LNADNFKV*
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