Gchil1412.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1412.t1
Unique NameGchil1412.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length206
Homology
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BLAST of Gchil1412.t1 vs. uniprot
Match: A0A2V3IME8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME8_9FLOR)

HSP 1 Score: 190 bits (483), Expect = 5.490e-58
Identity = 92/181 (50.83%), Postives = 124/181 (68.51%), Query Frame = 0 
Query:   28 ATNKYLTYQWCEVDSEN-LCDFVLEGVYPRYDHVQWGTGNFSLNGWISGAFTPKIVKKHDDY-QTTIGYVNSMDNLRDVFYCKG--VDLGYTWDTQCDYKTIPGRLFRTVPLPGVRGSGITREKGSIMGTHVPNGACIPIYITSYQVLDTTVSPPRVKENVHMSARQARILHQCVLMYTEF 204
            A N+ +TY+WCEV  +  LC F  + +Y  +DHV+WG+GNFSL G  SG+FTP+IV K  +Y  + IG V S+D  RDVF C+    + G  ++ +C Y  IPGRLF  V + G RGSGI+R +   +  HVPNGAC+ +Y+T Y++LDT+VSPPRV+E V M ARQARI + CVL Y +F
Sbjct:   27 AINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEHRCTYLNIPGRLFNAVRIRGTRGSGISRSREHALRRHVPNGACVLMYLTEYEILDTSVSPPRVREVVRMPARQARIENNCVLFYAQF 207
[Close]
BLAST of Gchil1412.t1 vs. uniprot
Match: A0A2V3IB93_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IB93_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 1.630e-25
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0 
Query:   28 ATNKYLTYQWCEVDSEN-LCDFVLEGVYPRYDHVQWGTGNFSLNGWISGAFTPKIVKKHDDY-QTTIGYVNSMDNLRDVFYCKG--VDLGYTWDTQCDYKTIPGRLFRTV 133
            A N+ +TY+WCEV  +  LC F  + +Y  +DHV+WG+GNFSL G  SG+FTP+IV K  +Y  + IG V S+D  RDVF C+    + G  ++ +C Y  IPGRLF  V
Sbjct:   27 AINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEHRCTYLNIPGRLFNAV 136
The following BLAST results are available for this feature:
BLAST of Gchil1412.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IME8_9FLOR5.490e-5850.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IB93_9FLOR1.630e-2547.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:790702..791319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1412.t1Gchil1412.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 790702..791319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1412.t1 ID=Gchil1412.t1|Name=Gchil1412.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=206bp
MKLAFSLILTVAFIATSPTLADEVPSWATNKYLTYQWCEVDSENLCDFVL
EGVYPRYDHVQWGTGNFSLNGWISGAFTPKIVKKHDDYQTTIGYVNSMDN
LRDVFYCKGVDLGYTWDTQCDYKTIPGRLFRTVPLPGVRGSGITREKGSI
MGTHVPNGACIPIYITSYQVLDTTVSPPRVKENVHMSARQARILHQCVLM
YTEFY*
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