Gchil1355.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1355.t1
Unique Name	Gchil1355.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	796

Homology

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BLAST of Gchil1355.t1 vs. uniprot
Match: A0A1X6PAQ4_PORUM (CCHC-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAQ4_PORUM)

HSP 1 Score: 63.9 bits (154), Expect = 6.620e-7
Identity = 74/309 (23.95%), Postives = 118/309 (38.19%), Query Frame = 0

Query:  302 WINKTS-EYTQENAQKITKHHKKLRFEM-GDTTFTGTDPIAKTEFLQKFKLACDQNGFFEGAAMWLFQFYLKVQAYYLLQGRILGNTL--------AMDGDGTEMLESYPEVVNFLLETYATDEVIQEAYSEVLAYHQRSGQTESEFSLALWNLATRCGNVFTISRIKSLFSDNVDKAIRSQVRNYLASNRKVDY--SVLAGYSQGLG-DTLRLGKRPAMPPNSKDKPKRSVLEIEDTTTAEGSSHIKVPTGTAIHLAATQGRFPKPLTVSKPPSMVTRDPQTGGLVCWFCLAIDHLANNCANVPPGMR 597
            ++NKTS  Y      K  K ++ L     G   F G DP+    FL  FK ACD  G   G            QA+ LL  R+ G+            D      + +Y E VN+LL+ YAT ++++EAY+ ++A  Q   +    F+  L  +  R   +   S I   F + + + I+  V  +  +   +    +V A      G   +++  R  +   +   P R+   I+       +    VP   A      +G  P     S+  S   R P     +C+ C    H  + C   P G R
Sbjct:  137 FVNKTSLAYPPRLVDKADKINRALNGPFQGTKAFDGQDPLGIFGFLSTFKRACDSAGATHG------------QAFPLLSYRLAGDAKIAFVAACSTRDTRHRFEINTYGEAVNWLLQKYATLDLLKEAYAAIIAARQEQEEAPRSFADRLERMCGRLDGLIRRSDIVDTFVNGLHETIKGHVVTFQMTKTSLSLPEAVTAAQIYWTGVQKMKVDIRRQV--RNTTTPTRASTVIDGPGCVAAAVTAPVPPRFA---RPERGAVPHAGAASRSQSNSPRRPPVPTDICYNCQGTGHFMSECP-APRGER 427

The following BLAST results are available for this feature:

BLAST of Gchil1355.t1 vs. uniprot

BLAST of Gchil1355.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A1X6PAQ4_PORUM	6.620e-7	23.95	CCHC-type domain-containing protein n=1 Tax=Porphy...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 696..710
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 711..725
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 696..725
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..279

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004433_pilon	contig	tig00004433_pilon:899445..902820 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1355.t1	Gchil1355.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004433_pilon 899445..902820 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1355.t1 ID=Gchil1355.t1|Name=Gchil1355.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=796bp
MERPKRNTRGASAPPSHKGLKGAPSAQKILENPEELLRHPRDKTGKLHGP
PPMAMEPQRELPIEVAAEELWPQLEERAKAIVTLAVEDALTVKEKLDTRM
VPPSTDVDSFTRIVVDRAAQKLSERIHEMVKQYLFTDAREHVYRAVQDLW
VSEGFAESRPTQVTIAKCIPQGFQMGHSTHSKHLPTDSEYLQGPRQSQEV
PGKVDPQDIYLPPITGLVQKNTHGGGPKDDSSDSLDERRRNRKRKKRRTK
RGTNGEDDSDLDSSDSSSDTSSSSDDDRKYLEVPQLLNDMFTKAVDYRTC
RWINKTSEYTQENAQKITKHHKKLRFEMGDTTFTGTDPIAKTEFLQKFKL
ACDQNGFFEGAAMWLFQFYLKVQAYYLLQGRILGNTLAMDGDGTEMLESY
PEVVNFLLETYATDEVIQEAYSEVLAYHQRSGQTESEFSLALWNLATRCG
NVFTISRIKSLFSDNVDKAIRSQVRNYLASNRKVDYSVLAGYSQGLGDTL
RLGKRPAMPPNSKDKPKRSVLEIEDTTTAEGSSHIKVPTGTAIHLAATQG
RFPKPLTVSKPPSMVTRDPQTGGLVCWFCLAIDHLANNCANVPPGMRDQL
IQARMQNHQRLYGSSTQAPRTPVQVNTIEETPNLESTPAVQEENTERPFS
SHDVKLPKNTNVGIALPAPQGVFTVAHTDLGEVAFDKEGGCANASTTTKV
SINTNSESKPTDKASVDREEGADPERQWKDTVQIGQENGQLWGRIIDLLE
EFETMRSGHLGQIKATQYRIELLPDSKPIYQQPYRAGPKARKVEL*