Gchil1333.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1333.t1
Unique NameGchil1333.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length210
Homology
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A2V3J381_9FLOR (dTMP kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J381_9FLOR)

HSP 1 Score: 306 bits (783), Expect = 1.780e-103
Identity = 146/209 (69.86%), Postives = 171/209 (81.82%), Query Frame = 0
Query:    1 MRGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLPLQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQATNRDCIQTLWN 209
            MRGALIVFEG DRSGKSTQ R FT ALQ AG+ VAEH+PWSFP RT+P G++IN+YLTN   +   ALHLLFSANRWEK S+IR AL RGETVVLDRYAYSG+AYSVA GLPL W KCAD+GLPAPD+V++L LS  AAAKRA +GSERYEN HMQ+AV + F+ LRT+ WL++DADAD+ TVL+ ILD AMP VA+A +   I +LWN
Sbjct:    1 MRGALIVFEGTDRSGKSTQTRNFTNALQAAGIAVAEHSPWSFPHRTSPVGQVINAYLTNKTHLHERALHLLFSANRWEKASQIRQALRRGETVVLDRYAYSGIAYSVAKGLPLTWCKCADEGLPAPDVVVFLHLSPEAAAKRADYGSERYENKHMQTAVAKVFEQLRTEQWLVVDADADEATVLNRILDSAMPTVAKARSTPHIASLWN 209          
BLAST of Gchil1333.t1 vs. uniprot
Match: R7Q5I2_CHOCR (dTMP kinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5I2_CHOCR)

HSP 1 Score: 208 bits (530), Expect = 7.020e-65
Identity = 100/201 (49.75%), Postives = 126/201 (62.69%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLPLQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQATNRD 202
            RG LIVFEG DR GK+TQ RL    L + GV +A   PW FPDRTTP G ++N+YLT+  ++   A HLLFSANRWEK + IR+AL RGETVV DRYAYSGVAYSVA GL ++W   AD+GLP PD+V++L++    A  R GFG ER+E    Q  V   FD L+ + W +++                 P+V   T RD
Sbjct:    3 RGTLIVFEGLDRCGKTTQTRLCVEGLSRTGVKLAAGLPWRFPDRTTPIGEVLNTYLTSKTELGDEAAHLLFSANRWEKAATIREALGRGETVVYDRYAYSGVAYSVAKGLGMEWCLAADEGLPRPDVVVFLEVGVDEARGREGFGGERFEEAETQKRVGAVFDRLKGEGWSVVEGSGRMEEXXXXXXXXXXPVVQAVTGRD 203          
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A061QXD2_9CHLO (dTMP kinase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QXD2_9CHLO)

HSP 1 Score: 202 bits (513), Expect = 1.200e-61
Identity = 104/212 (49.06%), Postives = 142/212 (66.98%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLP---LQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQ-ATNRDCIQTLWN 209
            RGALIVFEG DR GK+TQ +L   +LQ  G+   +   W FPDRTTPTG++I+SYL++ ++VD  A+HLLFSANRWEK + +  AL  G T+V+DRY+YSGVA++ + G+P   + W K  ++GLPAPDL+LYL+L A  AA R GFGSERYE   MQ AV R F+ LR   W ++DA   +  V   +   A+  V + A   + ++ LW+
Sbjct:   55 RGALIVFEGGDRCGKTTQTQLLVQSLQSMGL---KAELWRFPDRTTPTGKMIDSYLSSRSEVDDAAIHLLFSANRWEKRAAMLRALREGTTLVVDRYSYSGVAFTASKGIPSLSISWCKAPEEGLPAPDLLLYLELGAEDAAARGGFGSERYETLDMQQAVRRQFESLRDGSWTVVDAARPRDAVHEEVKAHAVEAVRRCAEGLEPLRALWS 263          
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A383VYR9_TETOB (dTMP kinase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VYR9_TETOB)

HSP 1 Score: 196 bits (499), Expect = 6.490e-60
Identity = 107/211 (50.71%), Postives = 124/211 (58.77%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDR-TTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLP---LQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQATNRDCIQTLW 208
            RGA I+FEG DR GKSTQ  L   ALQ  GV V     W+FPDR  T TG  IN YL    D +  A+HLLFSANRWEK   +  AL  G ++V+DRYAYSGVAYS A  LP     W K  D GLPAPDLV+YL+L   AAA RAGFG ERYE    Q  V  AF  L+   WL++DA      +   IL  A+ +V +      IQ LW
Sbjct:    8 RGAFILFEGVDRCGKSTQTSLLAKALQSKGVAVES---WNFPDRKNTVTGHAINEYLAGKQDHNDRAIHLLFSANRWEKSDALLRALHSGTSLVVDRYAYSGVAYSAAKALPGMDAAWCKAPDAGLPAPDLVVYLELDNAAAAARAGFGGERYEKAEFQDRVRAAFQQLKEPSWLVVDASQSVEQIHEQILAEALQVVRRCKEGQPIQQLW 215          
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A1S3BY65_CUCME (dTMP kinase n=2 Tax=Cucumis melo TaxID=3656 RepID=A0A1S3BY65_CUCME)

HSP 1 Score: 194 bits (493), Expect = 9.620e-59
Identity = 96/208 (46.15%), Postives = 134/208 (64.42%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLPLQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQATNRDCIQTLWN 209
            RGAL+V EG DR GK+TQ+   T  L+  G +V     W FPDRTT  G++I+SYL+N + +D H +HLLFSANRWEK S +   L  G T++LDRY+YSGVA+S A GL L+W K  + GLPAPDLVLYL++S   AA+R G+GSERYE    Q+ V++++ +L   +W I+DA      +   + +  +  V +  N   +  LW+
Sbjct:   54 RGALVVLEGLDRCGKTTQSSRLTQYLEGLGHSVEL---WRFPDRTTSVGQMISSYLSNESQLDDHTVHLLFSANRWEKRSLMETKLKGGTTLILDRYSYSGVAFSCAKGLDLEWCKAPEVGLPAPDLVLYLEISPEMAAERGGYGSERYERIDFQNKVIKSYQVLLGSNWQIVDACRPMEVIEKELQETVLDCVKKCQNGAPLSHLWS 258          
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A4Y7Q901_9AGAM (dTMP kinase n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7Q901_9AGAM)

HSP 1 Score: 192 bits (488), Expect = 1.570e-58
Identity = 100/214 (46.73%), Postives = 126/214 (58.88%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLPLQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTK-------HWLIIDADADQHTVLHTILDRAMPIVAQATNRDCIQTLW 208
            RGA IV EG DRSGKSTQA L  + LQ A V+V       FPDRTTP G++I++YL + +DVD   +HLLFSANRWE VS I   L  G T++ DRYA+SGVA+S A GLPL W +  D  LPAPDL L+L +S   A  R G+G ERYE   +Q  V   F  L  +        W +IDA  D +TV  ++       +   T +D +  LW
Sbjct:    6 RGAFIVIEGLDRSGKSTQAALLQSRLQNANVSVKL---MKFPDRTTPVGKMIDAYLRSQSDVDDRTIHLLFSANRWEAVSSIESTLAAGTTIICDRYAFSGVAFSAAKGLPLAWCRSPDVSLPAPDLTLFLDISPDIAKSRGGYGEERYEKEELQRRVRNIFHQLGDELPKDGAGRWAVIDAGRDLNTVSESLWHEVAITIHDCTKQDSVGKLW 216          
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A090N3S7_OSTTA (dTMP kinase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N3S7_OSTTA)

HSP 1 Score: 190 bits (483), Expect = 8.140e-58
Identity = 96/211 (45.50%), Postives = 134/211 (63.51%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANG---LPLQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQATNRDCIQTLWN 209
            RGAL++FEGADR GKSTQAR     L++ GV       W +PDRTT TG +I++YL + +D    A+HLLF+ANRWEK + +   L  G T+V DRY+YSG A++ A G   L L W K  + GLP PD ++YL+LS   AA+R GFG ERYE   MQ AV   F+ +R   W +IDA+ D+  +   +L+ A+  + +A + + + TLW+
Sbjct:    5 RGALVLFEGADRCGKSTQARRLVKTLEQRGVRAEL---WRYPDRTTKTGEMIDAYLRSESDTADAAIHLLFAANRWEKKALMERKLADGVTLVCDRYSYSGCAFTAAKGVEGLDLTWCKAPEVGLPRPDALMYLELSLEDAARRGGFGEERYETTEMQRAVKEMFESMREPWWDVIDANRDEEVIEREVLEIALGAIERAKSGEPLGTLWD 212          
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A812CIT6_SEPPH (dTMP kinase n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812CIT6_SEPPH)

HSP 1 Score: 191 bits (484), Expect = 3.050e-57
Identity = 97/176 (55.11%), Postives = 119/176 (67.61%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLPLQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDAD 177
            RG LIVFEG D+SGKSTQ++    AL K G  V     WSFPDR T  G +I+SYL    ++D  ++HLLFSANRWEKVS++   L  G TV+ DRYA+SGVAYS A GLPL+W K  D GLP PD V++LQLS  A AKR GFG ERYE    Q+ V+  F  ++ + W II+AD
Sbjct:   69 RGQLIVFEGLDKSGKSTQSQKLKEALLKDGQFVDL---WSFPDRNTKLGDVIDSYLNKRLELDDRSIHLLFSANRWEKVSKLIKLLESGTTVITDRYAFSGVAYSAAKGLPLEWCKQPDVGLPKPDCVIFLQLSPEAGAKRNGFGEERYEKTQFQNKVLEQFMQIKDESWKIINAD 241          
BLAST of Gchil1333.t1 vs. uniprot
Match: A0A2P6TY72_CHLSO (dTMP kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TY72_CHLSO)

HSP 1 Score: 190 bits (482), Expect = 6.100e-57
Identity = 102/211 (48.34%), Postives = 130/211 (61.61%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLP---LQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQATNR-DCIQTLW 208
            RGA IVFEGADR+GKSTQ ++    LQ AGV  AE   W FPDRTT  G++INSYLT+ AD+D  A+HLLFSANRWEK   +   L  G T+V+DRYAYSGVA++ A G P     W    D+GLPAPD V +L L+   AA R G+G ERYE    Q  V+  F  +R   W +IDA      +   + ++A  +VA+     + I+ LW
Sbjct:   47 RGAFIVFEGADRAGKSTQCQMLVEHLQAAGV-AAEL--WRFPDRTTAIGKMINSYLTSQADIDDAAVHLLFSANRWEKREELLRKLRAGTTLVVDRYAYSGVAFTAAKGAPGLDRAWCMSPDEGLPAPDAVFFLSLTVEQAAARGGYGEERYEKADFQRKVLEQFQAMRGSSWRVIDASQSIEDIQQQLREQAAAVVARCQRGGEPIKQLW 254          
BLAST of Gchil1333.t1 vs. uniprot
Match: E1Z8Z0_CHLVA (dTMP kinase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8Z0_CHLVA)

HSP 1 Score: 188 bits (478), Expect = 7.380e-57
Identity = 98/199 (49.25%), Postives = 126/199 (63.32%), Query Frame = 0
Query:    2 RGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTGRIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAYSGVAYSVANGLP---LQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERYENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQ 197
            RGA IVFEGADR+GKSTQ ++    LQ  GV  AE   W FPDRTTP G++INSYLT+ +D+D  A+HLLFSANRWEK   +   L  G T+V+DRYAYSGVA++ A GLP     W    D GLPAPD V +L L+   AA R G+G ERYE +  Q  V+  F  +R   W ++DA      +   + ++A  +VA+
Sbjct:    7 RGAFIVFEGADRAGKSTQCQMLVEHLQAQGV-AAEL--WRFPDRTTPIGKMINSYLTSQSDIDDAAVHLLFSANRWEKREELLRKLHEGTTLVVDRYAYSGVAFTAAKGLPGLDRAWCMAPDAGLPAPDAVFFLCLTVEQAAARGGYGEERYEKDEFQRKVLDQFHAMRGSSWRVVDASQSIDAIQQQLREQAAAVVAR 202          
The following BLAST results are available for this feature:
BLAST of Gchil1333.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J381_9FLOR1.780e-10369.86dTMP kinase n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
R7Q5I2_CHOCR7.020e-6549.75dTMP kinase n=1 Tax=Chondrus crispus TaxID=2769 Re... [more]
A0A061QXD2_9CHLO1.200e-6149.06dTMP kinase n=1 Tax=Tetraselmis sp. GSL018 TaxID=5... [more]
A0A383VYR9_TETOB6.490e-6050.71dTMP kinase n=1 Tax=Tetradesmus obliquus TaxID=308... [more]
A0A1S3BY65_CUCME9.620e-5946.15dTMP kinase n=2 Tax=Cucumis melo TaxID=3656 RepID=... [more]
A0A4Y7Q901_9AGAM1.570e-5846.73dTMP kinase n=1 Tax=Rickenella mellea TaxID=50990 ... [more]
A0A090N3S7_OSTTA8.140e-5845.50dTMP kinase n=2 Tax=Ostreococcus tauri TaxID=70448... [more]
A0A812CIT6_SEPPH3.050e-5755.11dTMP kinase n=1 Tax=Sepia pharaonis TaxID=158019 R... [more]
A0A2P6TY72_CHLSO6.100e-5748.34dTMP kinase n=1 Tax=Chlorella sorokiniana TaxID=30... [more]
E1Z8Z0_CHLVA7.380e-5749.25dTMP kinase n=1 Tax=Chlorella variabilis TaxID=554... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..209
e-value: 8.9E-58
score: 197.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..193
IPR018094Thymidylate kinaseTIGRFAMTIGR00041TIGR00041coord: 2..185
e-value: 4.3E-32
score: 109.4
IPR018094Thymidylate kinaseHAMAPMF_00165Thymidylate_kinasecoord: 4..195
score: 14.377904
IPR039430Thymidylate kinase-like domainPFAMPF02223Thymidylate_kincoord: 8..180
e-value: 1.7E-36
score: 125.6
NoneNo IPR availablePANTHERPTHR10344THYMIDYLATE KINASEcoord: 2..193
NoneNo IPR availablePANTHERPTHR10344:SF1THYMIDYLATE KINASEcoord: 2..193
NoneNo IPR availableCDDcd01672TMPKcoord: 5..189
e-value: 1.99854E-22
score: 88.0944
IPR018095Thymidylate kinase, conserved sitePROSITEPS01331THYMIDYLATE_KINASEcoord: 94..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:406199..406828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1333.t1Gchil1333.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 406199..406828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1333.t1 ID=Gchil1333.t1|Name=Gchil1333.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=210bp
MRGALIVFEGADRSGKSTQARLFTTALQKAGVTVAEHAPWSFPDRTTPTG
RIINSYLTNAADVDHHALHLLFSANRWEKVSRIRDALTRGETVVLDRYAY
SGVAYSVANGLPLQWTKCADQGLPAPDLVLYLQLSAGAAAKRAGFGSERY
ENNHMQSAVVRAFDLLRTKHWLIIDADADQHTVLHTILDRAMPIVAQATN
RDCIQTLWN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR018094Thymidylate_kinase
IPR039430Thymidylate_kin-like_dom
IPR018095Thymidylate_kin_CS