Gchil1279.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1279.t1
Unique NameGchil1279.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length253
Homology
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BLAST of Gchil1279.t1 vs. uniprot
Match: R7QKI8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKI8_CHOCR)

HSP 1 Score: 114 bits (286), Expect = 6.890e-27
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 0 
Query:    5 RGRQPRQSLVTANLHQSIVEFAHKIGAPSLY-ADFRDFTGWNQRISGAQYEPAWRQLAQEVLRAAQDMGIHRLSDLKRDVIFDIMPLVVKKKPHETDKLVSTNARRQLINNKPSKQPTLMTLLEMHI 130
            RGRQPRQSLV+  +HQSI +FA+ IG P    A FRD++GW   ISG +Y+ AW  L +   +    +    +  LKRDV+ DI+ +VV K+PHE+ KLVSTNARRQ    +PS   ++MT+ E H+
Sbjct:   74 RGRQPRQSLVSPTMHQSISQFANVIGGPVFVPAGFRDYSGWLSTISGPRYQLAWSNLVRAFTQECATVEQKTIPQLKRDVVTDIVNMVVDKRPHESAKLVSTNARRQC-ETRPSGGISVMTIFEKHL 199
The following BLAST results are available for this feature:
BLAST of Gchil1279.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QKI8_CHOCR6.890e-2748.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004437_piloncontigtig00004437_pilon:954020..954778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1279.t1Gchil1279.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004437_pilon 954020..954778 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1279.t1 ID=Gchil1279.t1|Name=Gchil1279.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=253bp
MKKRRGRQPRQSLVTANLHQSIVEFAHKIGAPSLYADFRDFTGWNQRISG
AQYEPAWRQLAQEVLRAAQDMGIHRLSDLKRDVIFDIMPLVVKKKPHETD
KLVSTNARRQLINNKPSKQPTLMTLLEMHIDQINSMSSRTSGAGSSSMAM
AHALAMSSSSSGAHKAPRAGPSSMNDSRRNDRNSSGGSSSRTGDRHSAKT
STAMEIATLLSGEASSSGAGSSSHHRLPSFTQLDARLKARKEKEKRDKRY
RR*
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