Gchil1264.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1264.t1
Unique NameGchil1264.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length663
Homology
BLAST of Gchil1264.t1 vs. uniprot
Match: A0A2V3IJB2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJB2_9FLOR)

HSP 1 Score: 622 bits (1603), Expect = 2.400e-214
Identity = 368/662 (55.59%), Postives = 452/662 (68.28%), Query Frame = 0
Query:    1 MTAQPRPPRRVSKRRREHPLPSIPSEGFTRDELDSDDSRDNASNPISTSYVATSHRQHTSSLTEPQFEVDDLDSSENEHVDSHLPSHQRL--------LGFTDAIFASDDDEDDPDFELASVQPFLSQPSSPTVQPLPXXXXXXXXXXXXXXXXXDVHFPLPNAQRSLQTKSSIQSSDSPPCSPQHDMTYAQFLQALNWNAPTEQHSFPDAFNKLLDDDDEFDYMREAANVQEDPLEFRDDLPVSRREVAQLLSERGIVLRSQKRQRTRRVAPATSAPTNPLLFPHSVVPATGTHVPVQSMSSVTPVAAVSSTFPPPCITPVSSANAVVSTTPAVASNTALASRISQQQALRTSAVAVLSPHFLVQFQQQLKAFVQILAHIHANSAKSARISGNEEPDPLANDAHEKSEIMLKRVVENRKMSISYHEMLETQMMRIALFSDGLAFRQFEECFSKPNRKKSVYAVDGLEDIELFLNDCRTLAIEQMPSRALERVEKISQPHLKRALLTRKRQFTLSGAREGWFIWTAEDDRLLALTIAKYGREVAEYSKDLLPHRLEDDCQARVRHLCSRRCTGNAVKRQMMLISAPLNQQEVKLVQHGLRMFGGRVEDEFVWKRIQKELLPGRQWSLLQKLWLWRETRKKTKARYRAKVSQKKKAMRSSDKT 654
            M+A+PRP RRVSKRRR  P PS+ +EGFTRDELDSDD  ++A       + + +H   +    EP FEVDDLDS++    D H P +Q          +GF D  FAS+D+EDDPDFEL       S P SP    LP      XXXXXXXXXXX     + +  + +Q +   +SSDS P +P  D+TYAQFLQALN +  +     P+AFN+LLDDDDEFDYMREAANVQ+DPLEFR+DL VSRREVAQLLSER I LRSQ++QR RR A A   P  PL  P ++VPA   H P+ +       A  ++  P P                             +   L    +  L+P  +  FQ+Q KAFVQILAH+HAN++KS R+S + +         ++SE MLKRVV NR++S SYH+ML+  +M I+ FSD L +R FE+CF K NR+KS YA+DG E IE+F++DCRTL +EQ+PS A+ R++ + +PHLK+AL TRKRQFTL+GAREGWF WTAEDDRLLALTIAKYGREV EY+KDLLPHRLE DCQARVRHL SRRC  NAVKRQ+M ISAPLNQQEV LVQ+GL+ FG RVED  VWKRIQ+ELLPGRQWSLLQKLWLWRETRKKTKARYRAK S++K+A+R + K+
Sbjct:    1 MSARPRPCRRVSKRRRVEPFPSVTAEGFTRDELDSDDPAEHAPQHAKL-HSSFAHLSDSLIPEEPHFEVDDLDSTD----DDHFPPNQAATTLAEPQPIGFADVPFASEDEEDDPDFELNPAYALPSPPPSPXXXXLPFNLASFXXXXXXXXXXXXASGAIIHQPQPVQVQEVPKSSDSGPVTPSRDLTYAQFLQALNPSIASSPVP-PEAFNQLLDDDDEFDYMREAANVQDDPLEFRNDLLVSRREVAQLLSERDIALRSQRKQRARRSASAAKPPAVPLSLPQNLVPA---HAPIVAGGH----ACAAAPAPMPM----------------------------RSLPLLPGTIMPLNPLSISHFQEQFKAFVQILAHVHANASKSFRMSDDGQSHQDTKQTLDRSERMLKRVVLNRQLSASYHDMLDKHVMHISRFSDELGYRAFEQCFRKENRRKSAYAIDGFESIEMFMSDCRTLPVEQLPSGAVARLDIVCRPHLKQALSTRKRQFTLTGAREGWFTWTAEDDRLLALTIAKYGREVGEYAKDLLPHRLEGDCQARVRHLSSRRCADNAVKRQVMHISAPLNQQEVALVQYGLQSFGSRVEDCDVWKRIQRELLPGRQWSLLQKLWLWRETRKKTKARYRAKESERKRALRDARKS 621          
BLAST of Gchil1264.t1 vs. uniprot
Match: R7Q8N9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8N9_CHOCR)

HSP 1 Score: 310 bits (794), Expect = 4.670e-92
Identity = 199/458 (43.45%), Postives = 270/458 (58.95%), Query Frame = 0
Query:  208 LDDDDEFDYMREAANVQEDPLEFRDDLPVSRREVAQLLSERGIVLRSQKR--QRTRRVAPATSAPTNPLLFPHSVVPATGTHVPVQSMSSVTPVAAVSSTFPPPCITPVSSANAVVSTTPAVASNTALASRISQQQALRTSAVAVLSPHFLVQFQQQLKAFVQILAHIHANSAKSARIS--------GNEEPD-PLANDAHEKSEIMLKRVVENRKMSISYHEMLETQMMRIALFSDGLAFRQFEECFSKPNRKKSVYAVDGLEDIELFLNDCRTLAIEQMPSRALERVEKISQPHLKRALLTRK--RQFTLSGAREGWFIWTAEDDRLLALTIAKYG-REVAEYSKDLLPHRLEDDCQARVRHLCSRRCTGNAVKRQMMLISAPLNQQEVKLVQHGLRMFG--GRVEDEFVWKRIQKELLPGRQWSLLQKLWLWRETRKKTKARYRAKVSQKKKAMR 649
            LDDDD+FDY+RE+A VQ+DPLE+RDDL VSR+E+ QL S   + LR Q R  + ++ V P  S  +   L             P+    S  P AA S+  P   +   + +N + S T   A+ +     I    A   +    L  H +    +Q+   VQ+L  +HA + K +R +         NE  D   AN A  +SE++L+ +VEN+K+S  YH+ L T + R+  FS+ L  R     F     K S Y +  L+ +E F++DCR   +E+MP   L R +    P + +A+ TR   RQ++ SG R GWF WTA DD LLA+T+AKYG  EV ++SKDLLPHR EDDCQ RV++L SRRC  N VKRQ+MLI++PLN  EV+ V  GL MFG    ++D  VWKRIQ ELLPGR+WS LQKLW WRETR+K KA+YRA+  +KKKAM+
Sbjct:  289 LDDDDDFDYLRESARVQDDPLEYRDDLQVSRKELVQLFSNSTVGLRRQTRHSRASQTVKPRQSNRSIRAL-------------PISRTLSSAPAAAASAPHP---VVNGAVSNTLRSQTGPSANRSVPTPYIGSPNAPFIN----LPVHCVNMLHEQMSIHVQLLTAVHAKAKKVSRSAREPRFESGANETVDISTANAAANRSEVLLRGLVENKKVSALYHQALATNLSRLKAFSEKLLHRDGNAAFKYETCKTSAYNLPVLDLLEQFISDCRNANLEEMPGNVLARFKPFHNPQISQAMWTRPQGRQYSASGLRPGWFSWTAGDDFLLAITMAKYGSNEVGQFSKDLLPHRKEDDCQTRVKYLSSRRCPDNPVKRQVMLITSPLNNYEVEQVTRGLSMFGRGACLDDAAVWKRIQAELLPGREWSHLQKLWHWRETRRKYKAKYRARSYKKKKAMK 726          
The following BLAST results are available for this feature:
BLAST of Gchil1264.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJB2_9FLOR2.400e-21455.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8N9_CHOCR4.670e-9243.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004437_piloncontigtig00004437_pilon:897848..899836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1264.t1Gchil1264.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004437_pilon 897848..899836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1264.t1 ID=Gchil1264.t1|Name=Gchil1264.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=663bp
MTAQPRPPRRVSKRRREHPLPSIPSEGFTRDELDSDDSRDNASNPISTSY
VATSHRQHTSSLTEPQFEVDDLDSSENEHVDSHLPSHQRLLGFTDAIFAS
DDDEDDPDFELASVQPFLSQPSSPTVQPLPFTLAHFASEDEDDDPDFDVH
FPLPNAQRSLQTKSSIQSSDSPPCSPQHDMTYAQFLQALNWNAPTEQHSF
PDAFNKLLDDDDEFDYMREAANVQEDPLEFRDDLPVSRREVAQLLSERGI
VLRSQKRQRTRRVAPATSAPTNPLLFPHSVVPATGTHVPVQSMSSVTPVA
AVSSTFPPPCITPVSSANAVVSTTPAVASNTALASRISQQQALRTSAVAV
LSPHFLVQFQQQLKAFVQILAHIHANSAKSARISGNEEPDPLANDAHEKS
EIMLKRVVENRKMSISYHEMLETQMMRIALFSDGLAFRQFEECFSKPNRK
KSVYAVDGLEDIELFLNDCRTLAIEQMPSRALERVEKISQPHLKRALLTR
KRQFTLSGAREGWFIWTAEDDRLLALTIAKYGREVAEYSKDLLPHRLEDD
CQARVRHLCSRRCTGNAVKRQMMLISAPLNQQEVKLVQHGLRMFGGRVED
EFVWKRIQKELLPGRQWSLLQKLWLWRETRKKTKARYRAKVSQKKKAMRS
SDKTGSNALADG*
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