Gchil1248.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1248.t1
Unique NameGchil1248.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length261
Homology
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BLAST of Gchil1248.t1 vs. uniprot
Match: A0A2V3IJ97_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ97_9FLOR)

HSP 1 Score: 247 bits (631), Expect = 7.370e-79
Identity = 147/262 (56.11%), Postives = 189/262 (72.14%), Query Frame = 0 
Query:    1 MPLFHSQFVGQVEILEDDKPWQNIDAPTPQAEEKNAARALLLHEANAGLQGTKTILDTAAHSHHVAVATASSLSAQTRQLEGITEDLDVIDGTVDRAGNTVYKLTRNPLRALVEKPLTHSKKKRNQNHVNPALISAEEDSRGIRSKSDKSE-SDPSSSWLARRKEELIPRISKKGHRSEKRTVEVMEDHYSDF-DDDVKQILRKQDDHLDQTANQLTELRNLALGINAELGKQAEMVESIDAPKITGKLRYNNAKLKRKFRI 260
            MPLF ++  G+VE L+D+    N  +P PQ  ++NA RALLLHEA  GL+ TK I DTAA SH VAVATASSLSAQTRQLEGI + LD +D TVD+AG TV+KLTRNPLRALVEKP + SK++     ++   +      R   S  D+ E ++  S+WL+RRKEEL+   +K+G     +TV    D YSD  DD+VKQILRKQDD+LD+TA QL+EL+ +ALG+N E+ KQAE+V+SIDAP+IT K+RYNN KLKRK ++
Sbjct:    1 MPLFRTRLPGEVEFLDDEPSNDNSTSP-PQDVQENAPRALLLHEAEKGLEATKNIRDTAAQSHEVAVATASSLSAQTRQLEGIADQLDEVDNTVDKAGQTVHKLTRNPLRALVEKPFSRSKRREKAVKLSGQSVLPSSSKRSQSSTGDQKEKANKPSTWLSRRKEELLGNSTKQGD-GHLQTV----DSYSDIKDDEVKQILRKQDDYLDETAQQLSELQRVALGMNEEIEKQAEIVDSIDAPEITTKIRYNNQKLKRKLKL 256
The following BLAST results are available for this feature:
BLAST of Gchil1248.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJ97_9FLOR7.370e-7956.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availableGENE3D1.20.5.110coord: 196..256
e-value: 1.2E-7
score: 33.8
NoneNo IPR availableGENE3D1.20.5.110coord: 33..105
e-value: 2.1E-6
score: 29.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..160
NoneNo IPR availablePANTHERPTHR19305SYNAPTOSOMAL ASSOCIATED PROTEINcoord: 42..256
NoneNo IPR availablePANTHERPTHR19305:SF9SYNAPTOSOMAL-ASSOCIATED PROTEIN 29coord: 42..256
NoneNo IPR availableCDDcd15841SNARE_Qccoord: 200..256
e-value: 2.22132E-8
score: 47.5532
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 46..104
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 196..255
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 197..239
score: 11.21038

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004437_piloncontigtig00004437_pilon:669458..670240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1248.t1Gchil1248.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004437_pilon 669458..670240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1248.t1 ID=Gchil1248.t1|Name=Gchil1248.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=261bp
MPLFHSQFVGQVEILEDDKPWQNIDAPTPQAEEKNAARALLLHEANAGLQ
GTKTILDTAAHSHHVAVATASSLSAQTRQLEGITEDLDVIDGTVDRAGNT
VYKLTRNPLRALVEKPLTHSKKKRNQNHVNPALISAEEDSRGIRSKSDKS
ESDPSSSWLARRKEELIPRISKKGHRSEKRTVEVMEDHYSDFDDDVKQIL
RKQDDHLDQTANQLTELRNLALGINAELGKQAEMVESIDAPKITGKLRYN
NAKLKRKFRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom