Gchil1129.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1129.t1
Unique Name	Gchil1129.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	235

Homology

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BLAST of Gchil1129.t1 vs. uniprot
Match: A0A141SEI9_AGACH (ATP synthase CF0 B chain subunit I n=1 Tax=Agarophyton chilensis TaxID=2510777 RepID=A0A141SEI9_AGACH)

HSP 1 Score: 291 bits (746), Expect = 6.910e-98
Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0

Query:   57 MXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            M   NAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL
Sbjct:    1 MQVFNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 178

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BLAST of Gchil1129.t1 vs. uniprot
Match: ATPF_GRATL (ATP synthase subunit b, chloroplastic n=1 Tax=Gracilaria tenuistipitata var. liui TaxID=285951 RepID=ATPF_GRATL)

HSP 1 Score: 258 bits (659), Expect = 1.360e-84
Identity = 154/182 (84.62%), Postives = 164/182 (90.11%), Query Frame = 0

Query:   53 MESFMXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            M+S +   + I NFDT+YNLSI FNTDFLEANVINILLLL GL+YVLKEFLGSILVDRQEKVL AIQESEERL+QAN RLSXXXXXXXXX  V+ QIIKEAE TAQKVRQSILDQGKADV+KLI+ASK SI TAE QIKQQIQLQVTSLAIKRVTMQLQDQITP IQT+IIDNNIAQLGGYL
Sbjct:    1 MDSCIQVFSVIANFDTDYNLSISFNTDFLEANVINILLLLLGLMYVLKEFLGSILVDRQEKVLLAIQESEERLKQANSRLSXXXXXXXXXQMVIAQIIKEAETTAQKVRQSILDQGKADVDKLISASKASIATAEVQIKQQIQLQVTSLAIKRVTMQLQDQITPNIQTRIIDNNIAQLGGYL 182

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BLAST of Gchil1129.t1 vs. uniprot
Match: A0A345U773_9FLOR (ATP synthase subunit b, chloroplastic n=6 Tax=Gracilariaceae TaxID=31469 RepID=A0A345U773_9FLOR)

HSP 1 Score: 254 bits (649), Expect = 4.510e-83
Identity = 152/182 (83.52%), Postives = 164/182 (90.11%), Query Frame = 0

Query:   53 MESFMXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            MESFM   N I NF+T+ NL I FNTDFLEANVINILLLLSGLIYVLKEFLGSILV RQEKVL AIQESEERLQQANLRL XXXXXXXXXX V+ QIIKEAE+TAQKVRQSILDQGKAD++KL+ ASK SI+TAE QIKQQIQLQ+TSLAIKRVTMQLQ+QITP +Q KIIDNNIAQLGG+L
Sbjct:    1 MESFMQLFNIIANFETDVNLGISFNTDFLEANVINILLLLSGLIYVLKEFLGSILVTRQEKVLSAIQESEERLQQANLRLXXXXXXXXXXXVVIAQIIKEAELTAQKVRQSILDQGKADIDKLLYASKASISTAEIQIKQQIQLQITSLAIKRVTMQLQNQITPALQAKIIDNNIAQLGGHL 182

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BLAST of Gchil1129.t1 vs. uniprot
Match: UPI001D0FA56D (ATP synthase CF0 subunit I n=4 Tax=Crassiphycus TaxID=2780438 RepID=UPI001D0FA56D)

HSP 1 Score: 254 bits (649), Expect = 4.510e-83
Identity = 152/182 (83.52%), Postives = 166/182 (91.21%), Query Frame = 0

Query:   53 MESFMXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            ME++M   N I N DTN N SI FNTDFLEANVINI+LLLSGLIYVLKEFLGSILV RQEKVL AIQESEERL+QANLRL XXXXXXXXXXXV+TQI+KEAE+TAQKVRQSILDQGKADV+KLI+ASK SI TAE QIKQQIQLQ+TSLAIKRVT+QLQ+QITP +QTKIIDNNIAQLGG+L
Sbjct:    1 MENYMQVFNIIANLDTNVNQSISFNTDFLEANVINIVLLLSGLIYVLKEFLGSILVTRQEKVLLAIQESEERLRQANLRLXXXXXXXXXXXXVITQIVKEAELTAQKVRQSILDQGKADVDKLISASKASIATAEIQIKQQIQLQITSLAIKRVTIQLQNQITPVLQTKIIDNNIAQLGGHL 182

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BLAST of Gchil1129.t1 vs. uniprot
Match: A0A2Z2JPV0_9FLOR (ATP synthase subunit b, chloroplastic n=3 Tax=Gracilariaceae TaxID=31469 RepID=A0A2Z2JPV0_9FLOR)

HSP 1 Score: 246 bits (628), Expect = 7.000e-80
Identity = 139/182 (76.37%), Postives = 150/182 (82.42%), Query Frame = 0

Query:   53 MESFMXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            ME+FM   N I N   N N  I FNTDFLEANVINILLLLSGLIYVLKEFLGSIL++RQEKVL AIQESEERLQQANLRLS           V+TQII EAE+TAQKVRQSILDQGKADV KLI+ASK SI TAE QIKQQIQLQ+TSLAI+RVTMQLQ+QITP +Q KIIDNNI+QLGG L
Sbjct:    1 MENFMQVINIIANSGVNLNEGISFNTDFLEANVINILLLLSGLIYVLKEFLGSILINRQEKVLIAIQESEERLQQANLRLSESEKQLAQTQMVITQIINEAELTAQKVRQSILDQGKADVNKLISASKASIATAEIQIKQQIQLQITSLAIQRVTMQLQNQITPALQAKIIDNNISQLGGNL 182

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BLAST of Gchil1129.t1 vs. uniprot
Match: A0A345U7S7_GRAGA (ATP synthase subunit b, chloroplastic n=8 Tax=Gracilaria TaxID=2774 RepID=A0A345U7S7_GRAGA)

HSP 1 Score: 242 bits (617), Expect = 3.400e-78
Identity = 143/180 (79.44%), Postives = 152/180 (84.44%), Query Frame = 0

Query:   53 MESFMXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGG 232
            MESFM   N I NFD N +  I FNTDFLEANVINILLLLSGLIYVLKEFLGSILV RQEKVL AIQESEERLQQANLRL  XXXXXX    V+ QIIKEAE+TAQKVRQSILDQGK D++KLI ASK SI TAE QIKQQIQ Q+TSLAIKRVT+QLQ+QI P +Q KIIDNNIAQLGG
Sbjct:    1 MESFMQLFNIIANFDANVHSGISFNTDFLEANVINILLLLSGLIYVLKEFLGSILVTRQEKVLLAIQESEERLQQANLRLVEXXXXXXQTQVVIAQIIKEAELTAQKVRQSILDQGKMDIDKLIYASKLSIATAEIQIKQQIQCQITSLAIKRVTIQLQNQINPALQAKIIDNNIAQLGG 180

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BLAST of Gchil1129.t1 vs. uniprot
Match: W8DW05_9FLOR (ATP synthase subunit b, chloroplastic n=4 Tax=Gracilaria TaxID=2774 RepID=W8DW05_9FLOR)

HSP 1 Score: 239 bits (610), Expect = 3.330e-77
Identity = 141/178 (79.21%), Postives = 153/178 (85.96%), Query Frame = 0

Query:   57 MXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            M   N I N   + N  I FNT+FLEANVINI+LLLSGLIYVLKEFLGSIL+ RQEKVL AIQESEERLQQANLRL XXXXXX     V+TQIIKEAE+TAQKVRQSILDQGKAD++KLI ASK SI TAE QIKQQIQLQ+TSLAIKRVTMQLQ+QITP +QTKIIDNNIAQLGG+L
Sbjct:    1 MRLFNTIANVGIDVNSGISFNTNFLEANVINIVLLLSGLIYVLKEFLGSILIARQEKVLLAIQESEERLQQANLRLHXXXXXXAQTQIVITQIIKEAELTAQKVRQSILDQGKADIDKLIYASKASIGTAEVQIKQQIQLQITSLAIKRVTMQLQNQITPALQTKIIDNNIAQLGGHL 178

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BLAST of Gchil1129.t1 vs. uniprot
Match: A0A345U8D0_9FLOR (ATP synthase subunit b, chloroplastic n=2 Tax=Gracilariaceae TaxID=31469 RepID=A0A345U8D0_9FLOR)

HSP 1 Score: 233 bits (593), Expect = 1.450e-74
Identity = 128/182 (70.33%), Postives = 151/182 (82.97%), Query Frame = 0

Query:   53 MESFMXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            M++F+   N + NFDTN N SI FNT+FLEANVINI+LLLSGL+YVLKEFLGSILV RQ+KV+ AIQESEERLQQANLRL            V++QII+EAE+TAQKVRQSILDQGKAD++KLI+AS  SI TAE QIK+QIQLQ+ SLAIK+V M+L++QITP +QTKIIDNNI QLGG L
Sbjct:    1 MKNFIQVFNILANFDTNNNASISFNTNFLEANVINIVLLLSGLLYVLKEFLGSILVTRQDKVVLAIQESEERLQQANLRLVESEKQLAQTQAVISQIIQEAELTAQKVRQSILDQGKADIDKLISASNASILTAEIQIKEQIQLQIISLAIKKVRMKLENQITPALQTKIIDNNIDQLGGNL 182

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BLAST of Gchil1129.t1 vs. uniprot
Match: A0A345U8Y6_9FLOR (ATP synthase subunit b, chloroplastic n=1 Tax=Agarophyton vermiculophyllum TaxID=2608709 RepID=A0A345U8Y6_9FLOR)

HSP 1 Score: 230 bits (587), Expect = 8.210e-74
Identity = 130/172 (75.58%), Postives = 147/172 (85.47%), Query Frame = 0

Query:   63 IVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            I++F T+ ++S  FNT+FLEANVINILLLL GLIYVLKEFLGSIL  RQEKVL AIQESEERLQQANLRL+           V+ QII+EAE+TA+KVRQSILDQGK D+ KLI+ASK SI TAE QIKQ+IQLQ+TSLAIKRVTMQLQ+QITPT+QTKIIDNNIAQLGGYL
Sbjct:    2 IISFGTDIDIS--FNTNFLEANVINILLLLFGLIYVLKEFLGSILTARQEKVLLAIQESEERLQQANLRLNESEKQLAQTQVVIAQIIQEAELTARKVRQSILDQGKVDINKLISASKASIATAEIQIKQEIQLQITSLAIKRVTMQLQNQITPTLQTKIIDNNIAQLGGYL 171

[Close]

BLAST of Gchil1129.t1 vs. uniprot
Match: A0A345U9I9_9FLOR (ATP synthase subunit b, chloroplastic n=4 Tax=Gracilariopsis TaxID=2781 RepID=A0A345U9I9_9FLOR)

HSP 1 Score: 230 bits (586), Expect = 1.680e-73
Identity = 130/182 (71.43%), Postives = 145/182 (79.67%), Query Frame = 0

Query:   53 MESFMXXXNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLKEFLGSILVDRQEKVLFAIQESEERLQQANLRLSXXXXXXXXXXXVVTQIIKEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTSLAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL 234
            ME  M   N I     + N  I FNT+FLEANVINI LLL GLIYVLK+FLGSIL  RQEKVLFAIQESEERLQQANLRL+           ++ QII+EAE+TAQKVRQSILDQGKADV KLI+ASK +I TAE+QI+QQIQLQ+TSLAIKRVT+QLQ+QITP IQ KIIDNNIAQLGG L
Sbjct:    1 MEKVMQIFNIIATIQEHSNQGISFNTNFLEANVINITLLLFGLIYVLKQFLGSILTARQEKVLFAIQESEERLQQANLRLAESQKQLAQTQVIINQIIQEAELTAQKVRQSILDQGKADVNKLISASKANIATAESQIRQQIQLQITSLAIKRVTLQLQNQITPAIQAKIIDNNIAQLGGRL 182

The following BLAST results are available for this feature:

BLAST of Gchil1129.t1 vs. uniprot

BLAST of Gchil1129.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A141SEI9_AGACH	6.910e-98	98.31	ATP synthase CF0 B chain subunit I n=1 Tax=Agaroph...	[more]
ATPF_GRATL	1.360e-84	84.62	ATP synthase subunit b, chloroplastic n=1 Tax=Grac...	[more]
A0A345U773_9FLOR	4.510e-83	83.52	ATP synthase subunit b, chloroplastic n=6 Tax=Grac...	[more]
UPI001D0FA56D	4.510e-83	83.52	ATP synthase CF0 subunit I n=4 Tax=Crassiphycus Ta...	[more]
A0A2Z2JPV0_9FLOR	7.000e-80	76.37	ATP synthase subunit b, chloroplastic n=3 Tax=Grac...	[more]
A0A345U7S7_GRAGA	3.400e-78	79.44	ATP synthase subunit b, chloroplastic n=8 Tax=Grac...	[more]
W8DW05_9FLOR	3.330e-77	79.21	ATP synthase subunit b, chloroplastic n=4 Tax=Grac...	[more]
A0A345U8D0_9FLOR	1.450e-74	70.33	ATP synthase subunit b, chloroplastic n=2 Tax=Grac...	[more]
A0A345U8Y6_9FLOR	8.210e-74	75.58	ATP synthase subunit b, chloroplastic n=1 Tax=Agar...	[more]
A0A345U9I9_9FLOR	1.680e-73	71.43	ATP synthase subunit b, chloroplastic n=4 Tax=Grac...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 118..145
None	No IPR available	PANTHER	PTHR10031:SF41	ATPASE, F0 COMPLEX, SUBUNIT C, V-ATPASE PROTEOLIPID SUBUNIT C-LIKE DOMAIN PROTEIN-RELATED	coord: 1..50
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..234
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	CDD	cd06503	ATP-synt_Fo_b	coord: 81..204 e-value: 4.14982E-19 score: 78.2483
None	No IPR available	TMHMM	TMhelix		coord: 4..26
None	No IPR available	TMHMM	TMhelix		coord: 80..99
IPR000454	ATP synthase, F0 complex, subunit C	PRINTS	PR00124	ATPASEC	coord: 33..48 score: 39.95 coord: 12..31 score: 41.86
IPR000454	ATP synthase, F0 complex, subunit C	PANTHER	PTHR10031	ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL	coord: 1..50
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	1.20.20.10	F1F0 ATP synthase subunit C	coord: 1..76 e-value: 2.0E-21 score: 77.7
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	PFAM	PF00430	ATP-synt_B	coord: 81..210 e-value: 1.9E-17 score: 63.6
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	HAMAP	MF_01398	ATP_synth_b_bprime	coord: 75..212 score: 11.412523
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 11..53 e-value: 9.9E-11 score: 41.8
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 3..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000237_pilon	contig	tig00000237_pilon:60063..61535 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1129.t1	Gchil1129.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000237_pilon 60063..61535 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1129.t1 ID=Gchil1129.t1|Name=Gchil1129.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=235bp
MDSIISAASVIAAGLAVGLAAIGPGIGQGSAAANAVEGIARQPEVEGKIR
DKMESFMQVFNAIVNFDTNYNLSIRFNTDFLEANVINILLLLSGLIYVLK
EFLGSILVDRQEKVLFAIQESEERLQQANLRLSESEKQLAQTQMVVTQII
KEAEITAQKVRQSILDQGKADVEKLIAASKDSITTAETQIKQQIQLQVTS
LAIKRVTMQLQDQITPTIQTKIIDNNIAQLGGYL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000454	ATP_synth_F0_csu
IPR038662	ATP_synth_F0_csu_sf
IPR002146	ATP_synth_b/b'su_bac/chlpt
IPR002379	ATPase_proteolipid_c-like_dom
IPR035921	F/V-ATP_Csub_sf