Gchil10998.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10998.t1
Unique NameGchil10998.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length649
Homology
BLAST of Gchil10998.t1 vs. uniprot
Match: A0A2V3IHY7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHY7_9FLOR)

HSP 1 Score: 298 bits (763), Expect = 1.030e-88
Identity = 212/585 (36.24%), Postives = 287/585 (49.06%), Query Frame = 0
Query:    1 MQLARDLAPDPEPNADAAAPPRTPQPKWSYPQGSPQQFAQGESNPWAVWNDASARAQREQLQPRDPKAETDFWRGAARDLAAADAXXXXXXXXXXXNSPPSRAEHGANANAKENGNEEESALKDGSSADVWRMAREVTGEMVDMQSRLRGQLEQYDSVQNVDEYRQIARELLGPPPEVGDDSRPVRRSADFQEGAAEAEQLWDPDVDWMQFDHVQRELRNINNSDDRHNGSEEEPKPAASEDYMQQQRSFDGTDNQQLEEQAWDTATFTDQSTAPAFSDTNSMPGFIRNRFMRSGTYGASWAGAEREAEHLRRDGVPLRDPKADAEQWRSVARELDLDVGDDLLAVDEQSTGAGDAAASGDSDATIAEGRADGTASWASWGSGSASWTSANAVAKERDPKKEVDMWRSSARELTGAEAAPAADXXXXXXXXXXXXXRNASASWELANETAEARDPKKEVDMWRSSARELTSPDSPDATVSGNSGDTEGQASAWDSWRNANERWMHSLDDGGMKTEAADNWSPVADTQ-------SDWGANLGGKTSSERSAWQAWENAVERPNASVQQEWWKMRTDAVQRPEPKA 578
            M LAR+LAPD   ++D+ A    P  KW YP+G P  F +   NPW  W     R Q+  +Q RDPKAETDFWR AAR ++                S  +  +H A          ++S +     + VW+MAR+VTGEMVD+QSRL+ +LEQYD +   D+YR IAR+L+GPPPE  D+  P+R SAD  +GA  A   W+PDVDWM+FD V+RELR  +  + R          A  +            D  Q  +Q  D+A +TDQS +      ++MP F+RN+FMRS TYGASWAGAERE   L + G PLRDPKADAEQWRS+AREL+LDV  D+     Q   +       D+ + +                         +    +DP+       S        E+  +               R+ SA+WE ANE  ++RDPK+EVDMWR+SA ELTS   P +  +G+S   +  ++A  +                                       SD   + G K SSERSAW+ W+      + S  Q+WW+ RTD VQR   K+
Sbjct:   54 MDLARELAPDSH-SSDSPAVNPDPVDKWHYPEGRPDHFEE-RPNPWTAWQAVQQRPQQPAVQ-RDPKAETDFWRDAARSIS-------------DDVSHKAPQQHSA----------DDSTVHQQPPSGVWKMARDVTGEMVDLQSRLKQELEQYDPLAKTDQYRHIARDLVGPPPEPDDELNPIRESADLDKGA-HAGGGWNPDVDWMRFDDVRRELRKQHEKERR--------IKAEQQXXXXXXXXXPSADPAQPPKQT-DSAPYTDQSNSEQLLTRDNMPRFLRNKFMRSATYGASWAGAEREINQLIQQGAPLRDPKADAEQWRSIARELNLDVESDIAHSGRQQQQS-------DTQSVL------------------------ESAPSIQDPE-------SDPLHAESVESVESDTDDDVTEASAWGSWRSGSATWERANEKVQSRDPKQEVDMWRASALELTSG-VPSSAPTGDSAPNQANSTASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRDDSAGRKASSERSAWEQWDRVSGNIDTSRFQQWWESRTDTVQRASAKS 563          
BLAST of Gchil10998.t1 vs. uniprot
Match: R7QUD4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUD4_CHOCR)

HSP 1 Score: 292 bits (747), Expect = 3.980e-86
Identity = 224/688 (32.56%), Postives = 314/688 (45.64%), Query Frame = 0
Query:    1 MQLARDLAPDPEPNADAAAPPRTPQPKWSYPQGSPQQFAQGESNPWAVWNDASARAQREQ-LQPRDPKAETDFWRGAARDLAAADAXXXXXXXXXXXNSPPSRAEHGANANAKENGNEEESALKDGSSADVWRMAREVTGEMVDMQSRLRGQLEQYDSVQNVDEYRQIARELLGPPPEVGDDSRPVRRSADFQEGA-------------AEAEQLWDPDVDWMQFDHVQRELRNINNSDDRHN--GSEEEPKPAASEDYMQQQRSFDGTDN-------QQLEEQAWDTATFTDQS-----TAPAFSDTNSMPGFIRNRFMRSGTYGASWAGAEREAEHLRRDGVPLRDPKADAEQWRSVARELDLDVGDDLLAVDEQSTGAGDAAAS-GDSDATIAEGRADG---------TASWASWGSGSASWTSANAVAKERDPKKEVDMWRSSARELTGAEAAPAADXXXXXXXXXXXXXRNASASWELANETAEARDPKKEVDMWRSSARELTSPDSPDATVSGNSGDTEGQASAWDSWRNANERWMHSL---DDGGMKTEAADNWSPVADTQSDWGANLGGKTSSERSAWQAWENAVERPNASVQQEWWKMRTDAVQRPEPKATDRSSEGIDQWRAAAKEVSLEGFKEQAGGSAEDVNESKTSRLANDSSINAWKSVARDLTTEPLTEDEDG 647
            M LAR L       +D+ + PR P P W  P   P   A    + WA WN A A   R+    PRDP+ ETDFWR AARD+                  PP  A   A        N  +    + SS ++WR AR VTGEM  +Q RLR  L+ ++  +N D+YR IAREL+GPP +  D   PVRR++D  E A             AE    W+PDVDWM+F+ ++R+     +++ R       ++ K AA +     Q+    TD        +++++   + A F D++      A   S     P FI N+F    TYGA +AG E + E LR++G+PLRDPKADAE+WRS A+EL++   DD    D+ + GAG A A  G SDA+   G  D          ++SW+ W  G   W  A   +  RDPK EVDMWR SAR+LTG     AAD                      A   AE                                G++E + + W+SWR ANE W  ++   D    + + A +   +AD + DWGA L GK  SER+AW+ WE++  R   S    WW    ++    E      SS   DQWR+AA E+            +  V + +  ++  DS+++ WK +A+  T        DG
Sbjct:   47 MNLARSLG-----ASDSESDPRRPAPVWKLPDDQPPLPAADAESAWAAWNHAVANESRQPPAPPRDPQKETDFWRQAARDIP----------------QPPVDAADAAQGAD----NAYQPIDPNASSTEIWRQARGVTGEMTSLQHRLRSDLDNFNPDENTDQYRAIARELVGPPDDPADVPAPVRRASDVGEPATGSGSDSNPPRQDAEPGSGWNPDVDWMRFEDLRRDQAGKADAEARREVLRDAQKAKDAALDRLPAAQQGITYTDESGRELTPEEVDQARREGAMFVDEAGERIDAAKPSSKPAQAPAFIANKFKAGATYGAGYAGIEDDVEALRKEGIPLRDPKADAERWRSAAKELNITADDD----DDVTLGAGAAVADDGVSDASTDTGLRDEAQSEKDFDESSSWSQWREGEQRWQQAAETSPPRDPKAEVDMWRPSARQLTGETETAAADD---------------------AQGAAE--------------------------------GESE-EGNVWNSWRRANESWQSAVEEADKASAQNQPAQSPPGLADAKPDWGAGLDGKAMSERTAWENWESSNGRGFQSGSSLWWPSSPNSAGTNERAERRSSSSNADQWRSAAVELGGYSSDTSPDKGSSSVEKLRAQKMKRDSNLSFWKDIAKGFTQPSAAAAGDG 651          
BLAST of Gchil10998.t1 vs. uniprot
Match: A0A7S1ET39_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET39_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 3.970e-24
Identity = 123/472 (26.06%), Postives = 198/472 (41.95%), Query Frame = 0
Query:   26 PKWSYPQGSPQQFAQGESNPWAVWNDASAR-AQREQ-LQPRDPKAETDFWRGAARDLAAADAXXXXXXXXXXXNSPPSRAEHGANANAKENG-------------------NEEESALK-DGSSADVWRMAREVTGEMVDMQSRLRGQLEQYDSVQNVDEYRQIARELLGPPPEVGDDSRPVRRSADFQEGAAEAEQLWDPDVDWMQFDHVQRELRNINNSDDRHNGSEEEPKPAASEDYMQQQRSFDGTDNQQLEEQAW--DTATFTDQSTAPAFSDTNSMPG---------------------------------------------------FIRNRFMRS--GTYGASWAGAEREAEHLRRDGVPLRDPKADAEQWRSVARELDLDV----GDDLLAVDEQSTGAGDAAASGDSDATIAEGRADGTASWASWGSGSASWTSANAVAKERDPKKEVDMWRSSARELTGA 416
            PKW+  +G+ +   + +S  W  WN A  + A+ E+ ++ RD KAE D WR  AR+L + ++            +  +R E  +++N    G                     +E AL+ + SS+D+W+ AR+VT +  +++ RLR ++  YD  +   +Y   ARE+LG P   G+   P                 W+P  DW +FD V R+ + +N   +R   +E+  +   S D   +    DG    Q E  A   D A F D+ T     D N + G                                                   FI+    R    TYGA   G    AE L ++G+  RDP ++ + W+S A+E+  +V     D++   +E+         S +      E  +D +++WASW + S  WT +     +RDPK E+D WRSSARE+T +
Sbjct:   86 PKWTMVEGTMESDEETKSG-WEAWNSALQKEAEMEEFIEERDAKAEVDMWRSTARELGSTESVSSAERLSA---ADSTRFEKNSSSNEDLGGVPNFPDIDDILAGKYGETKRLDEFALESEFSSSDLWQAARDVTSQSKNLEDRLRDEVTNYDPTEKSSDYLSAAREILGDPKSTGNVPSPPSE--------------WNPSRDWSRFDDVSRQNK-LNAEKNRRKETEDSLRRKMSTDSSVEYVDSDGNVLSQDEVDAAFADGALFVDEITGENV-DLNDLHGSSEVFDGYDDQTSSSDLVTAQDVLEKSLENNFNLQEEPEQAVSSIPAPAASFIQRLSKRDFGSTYGADSPGQIFSAEELEKEGLLPRDPLSERDFWKSSAKEIIAEVTGVKNDNVAEHEEKEK-------STEFKTEDIEDESDNSSAWASWTNASQEWTRSIENGAQRDPKAEIDQWRSSAREVTAS 530          
BLAST of Gchil10998.t1 vs. uniprot
Match: A0A7S1TBQ1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBQ1_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 1.350e-12
Identity = 81/330 (24.55%), Postives = 129/330 (39.09%), Query Frame = 0
Query:  278 SDTNSMPG--FIRNRFMRSGTYGASWAGAEREAEHLRRDGVPLRDPKADAEQWRSVARELDLDVGDDLLAVDEQSTGAGDAAASGDSDATI----AEGRADGTASWASWGSGSASWTSANAVAKERDPKKEVDMWRSSARELTGAEAAPAADXXXXXXXXXXXXXRNASASWELANETAEARDPKKEVDMWRSSARELTSPDSPDATVSGNSGDTEGQASAWDSWRNANERWMH-----SLDDGGMKTEAADNWSPVADTQSDWGANLGGKTSSERSAWQAWENAVERPNASVQQEWWKMRTDAVQRPEPKATDRSSEGIDQWRAAAKEV 596
            ++ N +P   F R     +  YG  W+G E   E L  +G+  RDPK +AE WR  AR++   V      +++QS    D   S + D +     +    + +++W SW + S  W   N     R+P KEVD WRS+ARE T   A P A                 + SW+  +  A   +    V+          S DS   T+   + D E          N  +RWM      S +   ++     N  P+ + +              R AW +W+ +            W+ +   +Q  +PK      + +D WR+ A+EV
Sbjct:   27 AEANQVPSSDFGRRPNTSTSLYGGGWSGVEETMEKLEAEGLKPRDPKEEAEFWRGAARDVISTVDFTNAPIEDQSEVPKDEFVSPELDYSELMKPSASDEETSSAWDSWNTSSLRWERENDKPTLRNPAKEVDQWRSAAREATSNVAEPLAISPETSL---------VAESWDSVDSPASIPETSSVVE----------SSDSDGVTLVQGTVDNE----------NVTDRWMGISRELSAEVNFVEQPEEQNLVPI-NNEDXXXXXXXXXXXEARDAWSSWDASASA---------WEQKLSDIQERDPK------QEVDMWRSTAREV 311          
BLAST of Gchil10998.t1 vs. uniprot
Match: A0A7S0G2Z6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2Z6_9RHOD)

HSP 1 Score: 66.2 bits (160), Expect = 4.430e-8
Identity = 54/218 (24.77%), Postives = 91/218 (41.74%), Query Frame = 0
Query:   26 PKWSYPQG-SPQQF---AQGESNPWAVWNDASARAQRE---QLQPRDPKAETDFWRGAARDLAAADAXXXXXXXXXXXNSPPSRAEHGANANAKENGNEEESALKDGSSADVWRMAREVTGEMVDMQSRLRGQLEQYDSVQNVDEYRQIARELLGPPPEVGDDSRPV--------RRSADFQEGAAEAEQL----------WDPDVDWMQFDHVQREL 218
            PKW YP+   P++F   +  +   W  WN +  + ++E   +   RDP  ETDFWRGAARD+   D              PP+                            +W+ AR++  +   +QS L+ ++  ++  +  D Y+  A+E++    + G   +P         +R   ++  A+E + L          WDPD DW +FD +  EL
Sbjct:  108 PKWVYPKDVDPKEFFNESAEDKAAWGSWNQSCVKEEQEANGETTYRDPTKETDFWRGAARDIV--DEASGEETPAGWKREPPTEP-------------------LPNDPTKIWQAARDIAAKTQALQSDLQDEVVSFNPFEEKDTYKDAAKEVIAGLQQQG--KQPAEDLMADLQQRKEAYEALASEEDALTDGREVSINDWDPDRDWRRFDDIGAEL 302          
The following BLAST results are available for this feature:
BLAST of Gchil10998.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IHY7_9FLOR1.030e-8836.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUD4_CHOCR3.980e-8632.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1ET39_9RHOD3.970e-2426.06Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TBQ1_9RHOD1.350e-1224.55Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S0G2Z6_9RHOD4.430e-824.77Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 610..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 568..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000021_piloncontigtig00000021_pilon:150328..152274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10998.t1Gchil10998.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000021_pilon 150328..152274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10998.t1 ID=Gchil10998.t1|Name=Gchil10998.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=649bp
MQLARDLAPDPEPNADAAAPPRTPQPKWSYPQGSPQQFAQGESNPWAVWN
DASARAQREQLQPRDPKAETDFWRGAARDLAAADADADADADTDSPNSPP
SRAEHGANANAKENGNEEESALKDGSSADVWRMAREVTGEMVDMQSRLRG
QLEQYDSVQNVDEYRQIARELLGPPPEVGDDSRPVRRSADFQEGAAEAEQ
LWDPDVDWMQFDHVQRELRNINNSDDRHNGSEEEPKPAASEDYMQQQRSF
DGTDNQQLEEQAWDTATFTDQSTAPAFSDTNSMPGFIRNRFMRSGTYGAS
WAGAEREAEHLRRDGVPLRDPKADAEQWRSVARELDLDVGDDLLAVDEQS
TGAGDAAASGDSDATIAEGRADGTASWASWGSGSASWTSANAVAKERDPK
KEVDMWRSSARELTGAEAAPAADQADEPSSSSWASWRNASASWELANETA
EARDPKKEVDMWRSSARELTSPDSPDATVSGNSGDTEGQASAWDSWRNAN
ERWMHSLDDGGMKTEAADNWSPVADTQSDWGANLGGKTSSERSAWQAWEN
AVERPNASVQQEWWKMRTDAVQRPEPKATDRSSEGIDQWRAAAKEVSLEG
FKEQAGGSAEDVNESKTSRLANDSSINAWKSVARDLTTEPLTEDEDGS*
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