Gchil10987.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10987.t1
Unique NameGchil10987.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length428
Homology
[Close]
BLAST of Gchil10987.t1 vs. uniprot
Match: A0A2V3IBB6_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBB6_9FLOR)

HSP 1 Score: 143 bits (360), Expect = 4.410e-36
Identity = 95/237 (40.08%), Postives = 132/237 (55.70%), Query Frame = 0 
Query:  177 MRDRISKAKVLLEENNLASTPFWVRTARPVSIYFAGMHRGPTGRYRRAITTAIPPRLLHGISFVGRSIGELIVQDSTVDRAIVTMRALGFRHL--------PEFT-------RNII--------------------AKLWYTEAADRLQARFPAVFTKEGVLHDQQLCKQLQEQRTAPHDGPLTNSASRDPD-NVPEMAQNFSSDLESSSTGTPTAANTDGFTLVTRKRRRPSTGSS 377
            M+ RI+ AK  L  ++LA  P   R A+P+++YFAGM RGP GRYRRA+TTA+P   L  ISFVGR IGEL+V  S  DRAI TM+ALGFRHL        P F         NI+                    A+ WY  AA RL ARFPA+FT+      Q+L ++L + R A    P+++++S   + + P  + + ++DL +         + +GFT VTRKR+ P++ SS
Sbjct:    1 MQTRIAHAKAKLLHSDLAPVPPPRRQAQPIALYFAGMQRGPIGRYRRALTTALPGWALCSISFVGRQIGELLVHKSLADRAIATMKALGFRHLHQLDPVMDPRFKDRGLTTEENILRNVHACHYRFQQAASTPIPSARKWYLNAAARLTARFPALFTEVQAAQYQELRQRLLKAREARLQPPVSDASSEGSEYDPPSHSSDSTTDLAT--------VDEEGFTTVTRKRKTPTSPSS 229
The following BLAST results are available for this feature:
BLAST of Gchil10987.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IBB6_9FLOR4.410e-3640.08Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..110
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000021_piloncontigtig00000021_pilon:71321..72708 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10987.t1Gchil10987.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000021_pilon 71321..72708 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10987.t1 ID=Gchil10987.t1|Name=Gchil10987.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=428bp
MVEKHHLQLDNRMDTMETVIKEIRQALRQIQTKLEYPTTNMVNTDLTQHP
LNTTQSTHLGPRQHIQLGFQSTPQQGAPQQTDLLTMARELAEMRVEMETL
RNENQRLLRRTEKNYNPQHNTDKKKENQAGMGQKQQSVPQPVQPDNSQTQ
TSEHPRKTWDEIAAHNAPIMRVLEPKMRDRISKAKVLLEENNLASTPFWV
RTARPVSIYFAGMHRGPTGRYRRAITTAIPPRLLHGISFVGRSIGELIVQ
DSTVDRAIVTMRALGFRHLPEFTRNIIAKLWYTEAADRLQARFPAVFTKE
GVLHDQQLCKQLQEQRTAPHDGPLTNSASRDPDNVPEMAQNFSSDLESSS
TGTPTAANTDGFTLVTRKRRRPSTGSSPIKQPTLNHWTYETQLSATPPNC
RVSTTNGRTHSAGEEFNANYGFDPSNP*
back to top