Gchil10813.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10813.t1
Unique NameGchil10813.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length607
Homology
BLAST of Gchil10813.t1 vs. uniprot
Match: A0A2V3IFC8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC8_9FLOR)

HSP 1 Score: 682 bits (1761), Expect = 2.170e-239
Identity = 340/596 (57.05%), Postives = 447/596 (75.00%), Query Frame = 0
Query:    8 FKQVDAILDENIEEKLRSFASAGGDLTEACEALSQSYEGLPDMLRLLLDWINSYGNGAQVLEKAFNTVITTNEANIIPKLDDALTESDAKEFLTMVISSDKWSSVISDMASRHKKSLLYEMLMREKRLKDADLSLNTVKSSGEFVKALQEHFSIFFGSAAGQTCASVEALFTKVIALCSYDEHTLIVGTRFLCYMSRNAQKPLTRGVYKRVGEEVRKAVVGRAKKSTSISEQQKKYEVFRIFAMIDSAVAGAAINRSVVDALVMILEKGDTEQNFEKEIGTLGGVYGFLFGDVGVTDMETDGQSIIDTTLDFSINSKAFCIELLCHTEIVEGLMNAIFSHHHRSYITDKIPNIRKRECLVLLLMYIEMFRTMPEQDIRALLCNSSLRESFRNSLKLGMERINTVVAACEACPPGTPWFKMKRGIASTLADAVSNSSMAYGVFIWACEGLKGSSD-ARALIKTAPKHLAFLQAVAENHIQLRPKILDAVHEAFVRNYEGLDITQIEDMRDMYVNYIISLARVQMAPEVVDAFFEKWAGDERVDKAHLRRFVAGLLDTISLPFSKDLEQKFARMVEHKRVNSALDDETKKRVDRLLRA 602
            F   DAI ++N+ + L +   AGG L +ACE+L QSYEG P MLRL+ +WI+ YG+G  +LE AF T I  NEAN+I +L++AL +  AKE L  V+SSD+WS+++S +A RHK S L+ ML+REKRLKDA L L+ V S+  F+  ++E FS FF SAA     SV  L+ ++ A+C+YDEHTLIVG R+LC +SR + +    G+YKR+GEEVR+ +V      TS+SEQ+KK+E+FR+F +ID+A AG  I RS+VDALV ++  G T ++ E+++  L  VYGF+FGD+ ++ +  DG  I+D T D S   K F IE LCH E+++ LMNA FSH+HRSY  +K+P+  KR C+VLLL YIEMFRTMPE  I ++L    LRESFRN+LK  +ER +++ AACEACPPGTPW+K+K+G A TL DAV +  MA  V++WA EGLKG+ +  RAL KTAP+HLAFLQAVAE H+QLRP+ILDAVHEAFVR+Y GLDITQIEDMRD Y+ YII+LAR+QM PEVVDAF+  WAGDERVDKAHLRRF++GLLDTIS+PFS++L  K +R+V H+RV +ALD+ETK+R+ RL  A
Sbjct:   12 FDADDAIFEDNLIDMLTTHVQAGGALFDACESLHQSYEGFPQMLRLVTEWIDIYGDGTNILESAFQTSILANEANMISRLNEALAKPGAKEILAQVVSSDRWSAIVSQIAMRHKGSNLHNMLIREKRLKDAGLDLDVVASADNFILGMEEQFSAFFSSAAVAKDKSVRHLWERISAMCAYDEHTLIVGLRYLCSLSRRSGQIAISGLYKRIGEEVRQRIVLNGVAGTSVSEQEKKHEIFRMFILIDAAAAGVTIRRSLVDALVNVMVSGGTIRSSEQDVRILVEVYGFIFGDIDMSGIIQDGDKIMDGTADLSTAEKVFLIETLCHKEVLDDLMNATFSHYHRSYSKEKVPDTAKRRCMVLLLAYIEMFRTMPESSIHSVLDTPPLRESFRNNLKAIVERFDSIAAACEACPPGTPWYKIKKGHAKTLVDAVGDPLMASAVYMWAREGLKGTEENVRALEKTAPRHLAFLQAVAEVHLQLRPRILDAVHEAFVRDYPGLDITQIEDMRDNYIKYIIALARIQMTPEVVDAFYTNWAGDERVDKAHLRRFISGLLDTISIPFSEELWGKVSRLVRHERVEAALDNETKQRISRLQEA 607          
BLAST of Gchil10813.t1 vs. uniprot
Match: R7Q5S7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5S7_CHOCR)

HSP 1 Score: 394 bits (1012), Expect = 1.640e-125
Identity = 215/591 (36.38%), Postives = 344/591 (58.21%), Query Frame = 0
Query:    3 TALNVFKQVDAILDENIEEKLRSFASAGGDLTEACEALSQSYEGLPDMLRLLLDWINSYGNGAQVLEKAFNTVITTNEANIIPKLDDAL-TESDAKEFLTMVISSDKWSSVISDMASRHKKSLLYEMLMREKRLKDADLSLNTVKSSGEFVKALQEHFSIFFGSAAGQTCASVEALFTKVIALCSYDEHTLIVGTRFLCYMSRNAQKPLTRGVYKRVGEEVRKAVVGRAKKSTSISEQQKKYEVFRIFAMIDSAVAGAAINRSVVDALVMILEKGDTE--QNFEKEIGTLGGVYGFLFGDVGVTDMETDGQSIIDTTLDF--SINSKAFCIELLCHTEIVEGLMNAIFSHHHRSYITDKIPNIRKRECLVLLLMYIEMFRTMPEQDIRALLCNSSLRESFRNSLKLGMERINTVVAACEACPPGTPWFKMKRGIASTLADAVSNSSMAYGVFIWACEGLKGSSDARALIKTAPKHLAFLQAVAENHIQLRPKILDAVHEAFVRNYEGLDITQIEDMRDMYVNYIISLARVQMAPEVVDAFFEKWAGDERVDKAHLRRFVAGLLDTISLPFSKDLEQKFARMVEHKRVNSAL 588
            T  + F   DAIL ++++ +L +F +   D  +A E L +SYEG+PDM+R L++W + Y +G   LE+A  TV+  +E  IIP+LD+AL T   +   +T V  S +W+ V+  MA+R+K+S L+ +L RE RL  A ++   +++   FV A+ E F+  F      +   +  L+ +V ALC+YDE + IV  R    ++ +A  P  RG+Y+RVG+EVRK  V     +  +SE   +  V R+  + D   +  ++ +++VDAL+ +    D    + FE E   L  VYG L GD+ + + ++D   +++T  +F  S+  K   I +LCH E+ E ++ A+FSH +R+Y+ D  P+I KR CL +LL Y  +F    ++++  +L +   +E  RN +K     I  V   CE+  PG P FK++      L +   +  +A GV +WA EGL+G S+ R L+ TAP HLAFL+A+AE H  L+ ++L+ + EAF+R+Y  LD+ ++E +RD +   I  L R+QMAP++V  F   WA ++RVD AHLR F+ GLL  IS PFS+        ++ ++RV SA+
Sbjct:   79 TTPSPFDAFDAILSDDVDHQLSTFLNTHDDPRDATERLMESYEGVPDMIRALVEWSDIYADGTANLEQAVETVLLEHEQTIIPRLDEALATTEKSLPVVTTVTESKRWNPVVCSMAARNKESTLHNLLTRESRLSQAGINQEVLQTPASFVDAITEQFTKLFSPDKQVSDDELLGLYNRVSALCTYDECSTIVSLRMFNKLAHDADTPFMRGLYRRVGQEVRKEAVRVMTAANIMSEHMARQYVIRLAFITDCVESNVSMRKAIVDALLNLFGGTDRSIRRRFETETKILRSVYGCLIGDIEIKEADSD---VVETVQEFQGSVADKVVLIRMLCHVEVFEDILKALFSHKYRTYL-DGEPDISKRTCLCMLLAYSGVFICKDDKELPTMLEDEVAKEKLRNEMKTTFTEIRRVAEVCESLKPGCPRFKIRGPPVQVLLEGTKSPLIARGVLMWAKEGLEGGSNLRELLVTAPTHLAFLEAIAEKHPVLQGEVLEIIREAFMRDYPELDVIEVEKLRDKFTKTITGLVRIQMAPQIVRMFQGSWANNKRVDLAHLRHFINGLLQIISPPFSRTFAASVMELLNNERVASAI 665          
BLAST of Gchil10813.t1 vs. uniprot
Match: A0A2V3IKN4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKN4_9FLOR)

HSP 1 Score: 276 bits (705), Expect = 5.880e-81
Identity = 177/597 (29.65%), Postives = 307/597 (51.42%), Query Frame = 0
Query:    1 MSTALNVFKQVDAILDENIEEKLRSFASAGGDLTEACEALSQSYEGLPDMLRLLLDWINSYGNGAQVLEKAFNTVITTNEANIIPKLDDAL-TESDAKEFLTMVISSDKWSSVISDMASRHKKSLLYEMLMREKRLKDADLSLNTVKSSGEFVKALQEHFSIFFGSAAGQTCASVEALFTKVIALCSYDEHTLIVGTRFLCYMSRNAQKPLTRGVYKRVGEEVRKAVVGRAKKSTSISEQQKKYEVFRIFAMIDSAVAGAAINRSVVDALVMILEKGDTEQNFEKEIGTLGGVYGFLFGDVGVTDMETDGQSIIDTTLDFSINS--KAFCIELLCHTEIVEGLMNAIF-SHHHRSYITDKIPNIRKRECLVLLLMYIEMFRTMPEQDIRALLCNSSLRESFRNSLKLGMERINTVVAACEACPPGTPWFKMKRGIASTLADAVSNSSMAYGVFIWACEGLKGSSDARALIKTAPKHLAFLQAVAENHIQLRPKILDAVHEAFVRNYEGLDITQIEDMRDMYVNYIISLARVQMAPEVVDAFFEKWAGDERVDKAHLRRFVAGLLDTISLPFSKDLEQKFARMVEHKRV-NSALDDET 592
            MS  L  F++ DAIL  ++ EKL ++A++GG++  AC+ALS+SY G PD LR ++DWI    +G Q L  +F   + TN    IP++D AL T+S+A   ++  ++S  W++V+   A  H++SL  + + +E RL++   + + + S+ + ++A+ +   + FG+      + V+    K+ AL + +E    V  +F+  +   +     +  Y+ V +E+RK V+         SE+  K  ++R+  + DS++ G  I    +DAL+ IL+        EK I  +  +YG L G   +T++     S+++   D   +   K+  I  LCH EI + L+  +F S  ++S +     N++KRECL LL+ Y + F  +   +I   L N          ++     +  VV  CE    GT   K KR      A A+ +   A G+ IWA + L+G  D R+L+ +A K+L FL+A+A  H  LR  +L+ +  A++R Y GL+   +E +R + +N I  + +     ++V +  E+W  +E  ++ H  RFV  LL  IS P+           + H+RV  + L D+T
Sbjct:    1 MSNPLAAFQREDAILQNDVIEKLETYAASGGNVKAACDALSESYIGRPDALRAIVDWIVQSLDGEQNLIDSFQHQLLTNADAAIPRIDAALATQSEASALISKTLASPTWANVLFKNAEEHQQSLFADRVFQEARLQEVGFTADLIGSAQDLMEAVVQQERVIFGTENPME-SEVKRAIRKIAALTTSNESATFVVFQFISQLEHLSTDLFLKRGYQYVVQEIRKEVINCVTAIGGESERVAKQWIYRLLILADSSIYGQQIPEVFIDALMGILDV-TPRIRLEKHIKIVTHLYGTLLGQPILTNIR---GSLLELRADVRDDPIVKSLLIHALCHEEITDALLALLFNSGSNKSNVVQ--ANLKKRECLCLLVAYSKTFLPLQHDEIVRRLSNKETLAELNLRVRKAKRDLTHVVRVCEELKHGTVVSKFKRKAIEMFASAIEDFITAKGILIWAEKSLRGGKDVRSLLVSAEKYLGFLEAIAFYHSCLRKAVLNVILTAYMREYSGLESANVEQLRTILMNSITGMTKFMAGSDIVYSMAERWLMEEETEEEHFSRFVVSLLRAISPPYEPQFLSCLTEFLRHERVLRAVLADDT 590          
The following BLAST results are available for this feature:
BLAST of Gchil10813.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IFC8_9FLOR2.170e-23957.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5S7_CHOCR1.640e-12536.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IKN4_9FLOR5.880e-8129.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006942TH1 proteinPFAMPF04858TH1coord: 5..597
e-value: 4.7E-29
score: 101.5
IPR006942TH1 proteinPANTHERPTHR12144NEGATIVE ELONGATION FACTOR Dcoord: 3..593

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000138_piloncontigtig00000138_pilon:1503922..1505742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10813.t1Gchil10813.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000138_pilon 1503922..1505742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10813.t1 ID=Gchil10813.t1|Name=Gchil10813.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=607bp
MSTALNVFKQVDAILDENIEEKLRSFASAGGDLTEACEALSQSYEGLPDM
LRLLLDWINSYGNGAQVLEKAFNTVITTNEANIIPKLDDALTESDAKEFL
TMVISSDKWSSVISDMASRHKKSLLYEMLMREKRLKDADLSLNTVKSSGE
FVKALQEHFSIFFGSAAGQTCASVEALFTKVIALCSYDEHTLIVGTRFLC
YMSRNAQKPLTRGVYKRVGEEVRKAVVGRAKKSTSISEQQKKYEVFRIFA
MIDSAVAGAAINRSVVDALVMILEKGDTEQNFEKEIGTLGGVYGFLFGDV
GVTDMETDGQSIIDTTLDFSINSKAFCIELLCHTEIVEGLMNAIFSHHHR
SYITDKIPNIRKRECLVLLLMYIEMFRTMPEQDIRALLCNSSLRESFRNS
LKLGMERINTVVAACEACPPGTPWFKMKRGIASTLADAVSNSSMAYGVFI
WACEGLKGSSDARALIKTAPKHLAFLQAVAENHIQLRPKILDAVHEAFVR
NYEGLDITQIEDMRDMYVNYIISLARVQMAPEVVDAFFEKWAGDERVDKA
HLRRFVAGLLDTISLPFSKDLEQKFARMVEHKRVNSALDDETKKRVDRLL
RALRES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1