Gchil1080.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1080.t1
Unique NameGchil1080.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length194
Homology
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BLAST of Gchil1080.t1 vs. uniprot
Match: A0A2V3IMG5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG5_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 2.510e-47
Identity = 80/191 (41.88%), Postives = 115/191 (60.21%), Query Frame = 0 
Query:    4 SRLFLCLAVFFIHFAGISAERCAPTTPFSDDLIGNTYCSSGECYRPIARDCVSIYNKFTVLKINDGIRFFNCPETYIIRYRNPSVTPMIIKWPPLDSMPLN--QINDDNNRWCIRNQSQKRIEMFPVHSTRANFTRAVKEIVPHLLRIRDFGCELDEDGYWGQIQGRAYVNADVQAVISYLDTIAFQYALC 192
            +++ L + + F+    +  + C   TPF  +LIG T+    +CYRP + D VS+Y K  +L +N+      CPE Y++ YRNP VTPMIIK P L+  PLN      D   WC + Q +K+  +FPV  T+  FT AVK ++P L  IRDFGC   ++G+  Q+QGRAY N DV  +++YL  +AF+Y LC
Sbjct:    3 AKILLHIGMLFVALGLVQGQTCKQRTPFKKELIGQTFAKLDDCYRPRSSDYVSVYKKMFILTLNENPSPA-CPERYLVVYRNPKVTPMIIKHPYLE-FPLNGGASGSDVEEWCKKEQQKKKTVLFPVTETKKEFTAAVKAMLPRLKAIRDFGCTATKEGFIIQVQGRAYDNVDVADIMAYLHAVAFKYELC 191
The following BLAST results are available for this feature:
BLAST of Gchil1080.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG5_9FLOR2.510e-4741.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:953849..954430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1080.t1Gchil1080.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000172_pilon 953849..954430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1080.t1 ID=Gchil1080.t1|Name=Gchil1080.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=194bp
MFKSRLFLCLAVFFIHFAGISAERCAPTTPFSDDLIGNTYCSSGECYRPI
ARDCVSIYNKFTVLKINDGIRFFNCPETYIIRYRNPSVTPMIIKWPPLDS
MPLNQINDDNNRWCIRNQSQKRIEMFPVHSTRANFTRAVKEIVPHLLRIR
DFGCELDEDGYWGQIQGRAYVNADVQAVISYLDTIAFQYALCV*
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