Gchil10569.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10569.t1
Unique NameGchil10569.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length870
Homology
BLAST of Gchil10569.t1 vs. uniprot
Match: A0A2V3IS75_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS75_9FLOR)

HSP 1 Score: 902 bits (2330), Expect = 0.000e+0
Identity = 516/874 (59.04%), Postives = 604/874 (69.11%), Query Frame = 0
Query:    1 MDEPSTRPPLPPPSSQPPIAPSPRPTPPSSTTTIPAFYPSPTSVDLTASDEAPEHQPHHDKPLSVNAAPTHSNNHAPIPPTPPLDNNKNNTSSRPQPLRPHCVASHPQSHPHALQRPSDSADAPTTCARSSQQQXXXXXXXXXXXXXXXXXXXXXXXQRLPSVIVPPPSPALTNVTRSQFVEVLDNFLAQQPPDDCDHVDYTALVNQLRVLFDHLDGLVEQLPLRTSNTVCDALAKPHALQALLILLSDISAKSSPVIRDVRRTYRYPYITTSILANGTMNFRDAFIASKPRVALLLSFLDGNVPLLDSDAAATGADATGAQLARENAIIVGNVVQILVSYLGTNPEALIEQIRERRTLIPALVDMLHIGSVPQLLGALIPDRCVDDVLMMDHGKASFDGCMTSAMDVLASSQILHLLANAFVSATQTIYDECVND----TGAPTLEQVHRAEQLAFNVCEVYGMVVKKTLRAVRIHSDMAACKYLHVFGTASTSATVEVILNSGIELFRETELRKSSMLELALSLTTQLLELVEEDAERRVASVTGQPAALDTRALEHALQPILHNLMGVLIDTVSREKGQGGVRLRVLELLATCMRVCSEELMRFMDARRFGEVALTVMVKHPRCSLVQHVVCGAVESALLSPRATITSVTHWLLRSKLAEVVMHLWRAYEGDERWWSPQRAQQAPLLSALVHLACCTQHLFAMQEAHAASTXXXXXXXXXXXXXXXXXTPQ--VAVAPDTRRRFEDFCRSSLARIVADESVLCGPKPRRRSVMPAGVMGRTFGVLPRAGASASXXXXXXXXXAAPFARRSGVANSGAVAHLVRSPSAHRFGYVPPVSSLRSRFDDVFVEGAHDDFNSVASFAAFGDSDDLL 868
            MDEPSTRPPLPP S+ P  APSP P                  VDLTASDEAP  QP   KP   N  P+HSNNHAPIP   P    KN  S    PL+P     HPQ+ P      S + D P   A                                     PPPSP LTNVTR+QF+ VL NFL  QPP+    +DY AL N+LR LFDHLDGLVEQ+PLRTSNTVCDALA+P AL  LL LL+DISAKSSPVIRDVRR YRYPYITT+ILANGTMN RDAFIAS   V+ LLSFLDG VPLLD+  A T A+ T +QLA +N IIVGNVVQILVSYLGTNPEAL++Q+RER + +PALVDMLHIGSVP L  ALIPDRCVDDVL+MDH  ASFD  MT+A+ +LAS++I H LANAFVS TQTIY   V D       P  EQV +AEQLAFNV +VY  +VKKTLRAVRI+S M AC+YLHVFG A T++T+ +IL+SGIELFRET   K+++LE ALSLT QLLE VEEDAERRVASVTGQP ALDT ALE  L+PIL  L+GVLID V+R+ GQ GVRL +LEL  TCMRVCSE+LM F+D +RFGE+A  +M+ HPR SL+QHVVC  VES LLSP+ T  SV HWL+R  L + ++H+WRA++GD+ W  P++AQ+AP LSAL+H+ACC QH FAMQ++                       PQ  V VAP+++RRFE+FC S++A IV+ E+ LCGPKPRRR+  P G +GR FGVL R+ ++ S            F RRSGV NSG  AHLVRS SAHRFGYV PVSSLRSRFDDVFVEG  D+F +V SF+AFGD  D+L
Sbjct:    1 MDEPSTRPPLPPASAHPLAAPSPLPXXXXXXXXXXXXXXXXXXVDLTASDEAP--QPRSTKP---NPTPSHSNNHAPIPSDHPAT--KNAPSHLKPPLQPSQQPQHPQTSP------SGAEDQPCITA-------------------------------------PPPSPPLTNVTRAQFLPVLHNFLHHQPPNH--QIDYQALANRLRYLFDHLDGLVEQIPLRTSNTVCDALAQPRALTTLLYLLADISAKSSPVIRDVRRAYRYPYITTTILANGTMNIRDAFIASNTLVSHLLSFLDGQVPLLDAPHAPTTAEPTPSQLACDNPIIVGNVVQILVSYLGTNPEALLQQMRERPSFLPALVDMLHIGSVPPLFAALIPDRCVDDVLLMDHCNASFDLPMTNAVSLLASAKIYHCLANAFVSGTQTIYSATVGDHVNHLDTPNAEQVTKAEQLAFNVTQVYANLVKKTLRAVRINSSMPACQYLHVFGNADTASTIALILSSGIELFRETNGFKTTILENALSLTIQLLECVEEDAERRVASVTGQPPALDTSALEAELEPILRCLLGVLIDIVNRDDGQSGVRLGILELFVTCMRVCSEKLMHFIDKQRFGEIAFKIMMLHPRNSLIQHVVCRGVESGLLSPKTTKASVYHWLIRCNLMDRIVHVWRAHQGDKAWNCPRKAQEAPYLSALIHMACCVQHFFAMQQSEGR--------------------PQLDVGVAPESKRRFEEFCESTVAPIVSLETALCGPKPRRRTAQPVGSIGRAFGVLSRSSSTGSICSG--------FGRRSGVNNSGGRAHLVRSQSAHRFGYVAPVSSLRSRFDDVFVEGGDDEFEAVTSFSAFGDLGDVL 794          
BLAST of Gchil10569.t1 vs. uniprot
Match: R7QAJ0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAJ0_CHOCR)

HSP 1 Score: 400 bits (1029), Expect = 8.980e-127
Identity = 236/517 (45.65%), Postives = 309/517 (59.77%), Query Frame = 0
Query:  342 LGTNPEALIEQIRERRTLIPALVDMLHIGSVPQLLGALIPDRCVDDVLMMDHGKASFDGCMTSAMDVLASSQILHLLANAFVSATQTIYDECVN--DTGAPTLEQVHRAEQLAFNVCEVYGMVVKKTLRAVRIHSDMAACKYLHVFGTASTSATVEVILNSGIELFRETELRKSSMLELALSLTTQLLELVEEDAERRVASVTGQPAALDTRALEHALQPILHNLMGVLIDTVSREKGQGGVRLRVLELLATCMRVCSEELMRFMDARRFGEVALTVMVKHPRCSLVQHVVCGAVESALLSPRATITSVTHWLLRSKLAEVVMHLWRAYEGDERWWSPQRAQQAPLLSALVHLACCTQHLFAMQ---EAHAASTXXXXXXXXXXXXXXXXXTPQVAVAPDTRRRFEDFCRSSLARIVADESV-LCGPKPRRRSVMPAG-VMGRTFGVLPRAGASASXXXXXXXXXAAPFARRSGVANSGAV-----AHLVRSPSAHRFGYVPPVSSLRSRFDDVFVE 846
            + T+PEAL++   ER T IP+LV++LHIGSVPQLL  LIPDRCVDD+  MD    SF+  MT A+ VLA   +LH LANAFV A QTIY       D G     QVHRAEQ+AFN+  VYGMV+ K++RAVR+  D  AC YL+VFG A++++T+   L +GI+LF ET   +SS+L+ AL LT  LL+ +++D ERRVASV GQP  L+TRALE  L P+L  L+GVLIDTV   +G G +R+R+LE    C  VCSE L+   +  R GE+A+TVM+ +P  S++Q +V  AVESAL++   T     HWL++S+L E +M  WR   GD+ W     AQ+ P LSAL+H+ CC QH  A+Q   E +                       +V +       FE+F ++S+  I+  ES  L G  PRRR     G   GR+FG      AS                RRSG    G       AHLVRSPSAHRFGYV PV+++RS  DD+F+E
Sbjct:    1 METSPEALLKVFLERPTFIPSLVNLLHIGSVPQLLNCLIPDRCVDDLASMDPRTVSFEAPMTLALTVLAGGAVLHHLANAFVEAAQTIYTAATLPLDDGTVDSGQVHRAEQIAFNIVHVYGMVILKSIRAVRLKPDCRACGYLNVFGNANSASTIAGCLQAGIDLFMETHGEESSILKYALELTINLLQCLDKDKERRVASVYGQPQMLETRALEAELDPLLQPLVGVLIDTVETGRGHGQIRIRILEFFVECQSVCSERLVDSFNKARIGEIAMTVMLMNPHNSIMQKIVSRAVESALVTKHRTGGYAHHWLVKSRLIEKIMSTWRRDSGDKAWKDTGLAQKKPYLSALLHMGCCVQHWMAIQREVEEYVPDRNENGGEKAGADPVRKVLVDEVVL------EFEEFFKNSMDGIMRMESGHLGGAPPRRRGSRAGGNSFGRSFGSFGTTSASVL--------------RRSGSGMGGTGKGQNRAHLVRSPSAHRFGYVAPVNTVRSELDDMFIE 497          
The following BLAST results are available for this feature:
BLAST of Gchil10569.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IS75_9FLOR0.000e+059.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QAJ0_CHOCR8.980e-12745.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000159_piloncontigtig00000159_pilon:730043..732652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10569.t1Gchil10569.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000159_pilon 730043..732652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10569.t1 ID=Gchil10569.t1|Name=Gchil10569.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=870bp
MDEPSTRPPLPPPSSQPPIAPSPRPTPPSSTTTIPAFYPSPTSVDLTASD
EAPEHQPHHDKPLSVNAAPTHSNNHAPIPPTPPLDNNKNNTSSRPQPLRP
HCVASHPQSHPHALQRPSDSADAPTTCARSSQQQLKLKLKLQQQQQQQQQ
QQQHQKQQRLPSVIVPPPSPALTNVTRSQFVEVLDNFLAQQPPDDCDHVD
YTALVNQLRVLFDHLDGLVEQLPLRTSNTVCDALAKPHALQALLILLSDI
SAKSSPVIRDVRRTYRYPYITTSILANGTMNFRDAFIASKPRVALLLSFL
DGNVPLLDSDAAATGADATGAQLARENAIIVGNVVQILVSYLGTNPEALI
EQIRERRTLIPALVDMLHIGSVPQLLGALIPDRCVDDVLMMDHGKASFDG
CMTSAMDVLASSQILHLLANAFVSATQTIYDECVNDTGAPTLEQVHRAEQ
LAFNVCEVYGMVVKKTLRAVRIHSDMAACKYLHVFGTASTSATVEVILNS
GIELFRETELRKSSMLELALSLTTQLLELVEEDAERRVASVTGQPAALDT
RALEHALQPILHNLMGVLIDTVSREKGQGGVRLRVLELLATCMRVCSEEL
MRFMDARRFGEVALTVMVKHPRCSLVQHVVCGAVESALLSPRATITSVTH
WLLRSKLAEVVMHLWRAYEGDERWWSPQRAQQAPLLSALVHLACCTQHLF
AMQEAHAASTASSSSAVTSAAAAAAAATPQVAVAPDTRRRFEDFCRSSLA
RIVADESVLCGPKPRRRSVMPAGVMGRTFGVLPRAGASASGAAASASASA
APFARRSGVANSGAVAHLVRSPSAHRFGYVPPVSSLRSRFDDVFVEGAHD
DFNSVASFAAFGDSDDLLA*
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