Gchil10024.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10024.t1
Unique NameGchil10024.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length233
Homology
BLAST of Gchil10024.t1 vs. uniprot
Match: A0A2V3IR13_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR13_9FLOR)

HSP 1 Score: 253 bits (647), Expect = 7.360e-82
Identity = 140/230 (60.87%), Postives = 172/230 (74.78%), Query Frame = 0
Query:    1 MPPFLLRLKGARVLQAALLSTVMSSPREQLLPLSCTDKPYRPIANPTPVGLIGFSIAITLSSVPKLLDIDPLDPLLFAVALSLGSFAQLFAAYYHFLLNNLHAANTFALFGFHWLAQALYTYSSMFATPRDQALNHSDHVFALVYNVLFALSALVLWIPSFRIDRRLCATLFLLIVTYSFDAVALFQHRWAAIISGVAGVFASIISHYMAFAILFADACNGNISSLPLRS 230
            +P  LLRLK ARV QAALLST+M+SP+E LLPLS   K YRPIANP+P+GL GF+IAITL S+PKL    P DPL FAVAL LG FAQ+ AA YHFLLNNLHAANTF L+GFHW +QA+     + A P   A+  +D +  LVYN L A+S  VLWIPSFRIDR +C TLFLLI+ ++FDAVA+F HRWAAI+S ++G+ A+++S YMA AI   DA N + S L L++
Sbjct:   17 LPSVLLRLKNARV-QAALLSTIMNSPKEPLLPLSYASKSYRPIANPSPLGLFGFAIAITLVSIPKLAARPPADPLFFAVALFLGGFAQILAAIYHFLLNNLHAANTFGLYGFHWCSQAVL--EMVHAFPSIAAVPKADRIDMLVYNCLLAISTTVLWIPSFRIDRFVCTTLFLLIMVFTFDAVAVFDHRWAAIVSAISGILAALVSFYMALAIFVTDAWNKS-SELALQA 242          
BLAST of Gchil10024.t1 vs. uniprot
Match: A0A2V3J528_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J528_9FLOR)

HSP 1 Score: 66.6 bits (161), Expect = 1.430e-9
Identity = 59/171 (34.50%), Postives = 85/171 (49.71%), Query Frame = 0
Query:   43 IANPTPVGLIGFSIAITLSSVPKLLDIDPLDPLLFA-VALSLGSFAQLFAAYYHFLLNNLHAANTFALFGFHWLAQALYTYSSMFATPRDQALNHSDHVFALVYNVLFALSALVLWIPSFRIDRRLCATLFLLIVTYSFDAVALFQHRWAAIISGVAGVFASIISHYMAFA 212
            IANP P+GLIGF+ A  ++++ KL +      L    +A   G  AQ+ A+   F+ N  H+A  FA+FGFHW    L+ Y  +   P   A N  + V A  Y  + A    +LWIP+ R       TL L++  +  D  A +  R AA+ S V  + AS  + Y A A
Sbjct:    6 IANPAPLGLIGFATACIVNAIAKLCNTQQSSALFITGIAFFGGGGAQILASTLQFIRNEGHSALVFAVFGFHWWNTGLW-YMMLSHNP-SLAENVPNGVRA-AYPAVLATVTAILWIPTLRCSYVSAMTLALVVGAFVVDIPAQWGCRQAAVASAVFALAASGCAVYSAAA 173          
BLAST of Gchil10024.t1 vs. uniprot
Match: A0A7D5RWZ1_9PROT (Acetate uptake transporter n=1 Tax=Defluviicoccus sp. TaxID=2682137 RepID=A0A7D5RWZ1_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 2.520e-6
Identity = 46/170 (27.06%), Postives = 81/170 (47.65%), Query Frame = 0
Query:   44 ANPTPVGLIGFSIAITLSSVPKLLDIDPLDPLLFAVALSLGSFAQLFAAYYHFLLNNLHAANTFALFGFHWLAQALYTYSSMFATPRDQALNHSDHVFALVYNVLFALSALVLWIPSFRIDRRLCATLFLLIVTYSFDAVALFQ-HRWAAIISGVAGVFASIISHYMAFA 212
            ANP P+GL+ F++   L S         LD ++ A+A+  G  +Q+FA  + +   N  A   F  +GF WL     T + +   P+         V    Y  ++ L + V++I +FR++R L  T FLL+V ++  ++  F  ++  + I+G  G+     + Y   A
Sbjct:   31 ANPAPLGLLCFALTTILLSAHNA-GFFGLDAMILAMAVFYGGISQIFAGVFEWKKANTFATTAFISYGFFWL-----TLAGIIVFPKLGLAEKPSEVAMGSYLAIWGLMSFVMFIGTFRLNRALQVTFFLLVVAFALLSIGDFTGNKMFSRIAGFEGILLGFSAMYTGLA 194          
The following BLAST results are available for this feature:
BLAST of Gchil10024.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IR13_9FLOR7.360e-8260.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J528_9FLOR1.430e-934.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7D5RWZ1_9PROT2.520e-627.06Acetate uptake transporter n=1 Tax=Defluviicoccus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000791Acetate transporter GPR1/FUN34/SatP familyPFAMPF01184Gpr1_Fun34_YaaHcoord: 37..215
e-value: 3.0E-15
score: 56.4
NoneNo IPR availablePANTHERPTHR30178INNER MEMBRANE PROTEIN YAAHcoord: 41..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 217..232
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..186
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 187..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..216
NoneNo IPR availableTMHMMTMhelixcoord: 104..126
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 141..160
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 167..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:456070..456768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10024.t1Gchil10024.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 456070..456768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10024.t1 ID=Gchil10024.t1|Name=Gchil10024.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=233bp
MPPFLLRLKGARVLQAALLSTVMSSPREQLLPLSCTDKPYRPIANPTPVG
LIGFSIAITLSSVPKLLDIDPLDPLLFAVALSLGSFAQLFAAYYHFLLNN
LHAANTFALFGFHWLAQALYTYSSMFATPRDQALNHSDHVFALVYNVLFA
LSALVLWIPSFRIDRRLCATLFLLIVTYSFDAVALFQHRWAAIISGVAGV
FASIISHYMAFAILFADACNGNISSLPLRSLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000791Gpr1/Fun34/SatP