Gchil10018.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10018.t1
Unique NameGchil10018.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length152
Homology
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BLAST of Gchil10018.t1 vs. uniprot
Match: A0A2V3IT28_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT28_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 8.840e-42
Identity = 78/118 (66.10%), Postives = 94/118 (79.66%), Query Frame = 0 
Query:    5 LTSLKLFGCVIVPREDVVRICVLRGTTMQQIGAQCNPHLTAQFYGRYSEFYTHNYNPITDDDTCNFFEVFERRVNIPGVFVRIEVEDRMLLEAVLPVSYQMMKITEEGSSGVGWVQRE 122
            +TSL+ FG V VP E VVR+ VLRG  +QQIGAQCNP+LTA+FYG Y +FYT  ++PI DDD+ NFFE+FE RV +PG  VRIEV+DRML EAVLP+SY MM  TEEG+  +GWVQRE
Sbjct: 1722 MTSLRSFGRVFVPTEVVVRVYVLRGINLQQIGAQCNPYLTARFYGGYPDFYTQKHHPIIDDDSPNFFEMFESRVKMPGGSVRIEVKDRMLPEAVLPISYPMMTKTEEGNPRIGWVQRE 1839
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BLAST of Gchil10018.t1 vs. uniprot
Match: R7QRB4_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRB4_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 1.530e-29
Identity = 59/112 (52.68%), Postives = 82/112 (73.21%), Query Frame = 0 
Query:    6 TSLKLFGCVIVPREDVVRICVLRGTTMQQIGAQCNPHLTAQFYGRYSEFYTHNYNPITDDDTCNFFEVFERRVNIPGVFVRIEVEDRMLLEAVLPVSYQMMKITEEGSSGVG 117
            TSL+ FG V +P E VVR+ +LRG  +QQ+G+QCNP+LTA+FYG Y +++T  + PI DDD  NFF++FE RV +PG  VRIEV+DR+L E  +P+SY M  + +EG +  G
Sbjct:  921 TSLRSFGRVFIPTEVVVRVYILRGINLQQVGSQCNPYLTAKFYGGYPDYHTQKHEPIEDDDNPNFFDMFESRVKMPGGSVRIEVKDRVLPEVTVPLSYPMY-LKDEGKARFG 1031
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BLAST of Gchil10018.t1 vs. uniprot
Match: A0A1X6NMX4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMX4_PORUM)

HSP 1 Score: 102 bits (253), Expect = 2.890e-22
Identity = 51/115 (44.35%), Postives = 79/115 (68.70%), Query Frame = 0 
Query:    5 LTSLKLFGCVIVPREDVVRICVLRGTTMQQIGAQCNPHLTAQFYGRYSEFYTHNYNPITDDDTCNFFEVFERRVNIPGVFVRIEVEDRMLLEAVLPVSYQMMKITEEGSSGVGWV 119
            LTSL+ FG V VP E +VR+ VLRG  +QQ+G+ CNP+LTA+F+G Y +F++   +P+ D +  +F+++FE RV +PG  VR++V+DR+L E  LP++     I +    G GW+
Sbjct: 1741 LTSLRSFGRVFVPTEVLVRVYVLRGCHLQQVGSTCNPYLTARFFGGYPDFFSRKQSPVHDTENPDFYDMFEARVKMPGGSVRVQVKDRVLPELNLPIA-----IPDRRDEG-GWI 1849
The following BLAST results are available for this feature:
BLAST of Gchil10018.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IT28_9FLOR8.840e-4266.10Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7QRB4_CHOCR1.530e-2952.68C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1X6NMX4_PORUM2.890e-2244.35Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:341427..341882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10018.t1Gchil10018.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 341427..341882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10018.t1 ID=Gchil10018.t1|Name=Gchil10018.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=152bp
MECCLTSLKLFGCVIVPREDVVRICVLRGTTMQQIGAQCNPHLTAQFYGR
YSEFYTHNYNPITDDDTCNFFEVFERRVNIPGVFVRIEVEDRMLLEAVLP
VSYQMMKITEEGSSGVGWVQRERKCGNQQFTNFPVLSSGKKSYPDFVQTA
C*
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