Gchil10011.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10011.t1
Unique NameGchil10011.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length573
Homology
BLAST of Gchil10011.t1 vs. uniprot
Match: A0A2V3IGX3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGX3_9FLOR)

HSP 1 Score: 642 bits (1657), Expect = 8.070e-225
Identity = 337/561 (60.07%), Postives = 405/561 (72.19%), Query Frame = 0
Query:   12 RFLQNKSEDSVFKFLLLLAVLITVSSLTFIQFALTKLTNASVFSARRRNVV---SPPPSVSIWSPKASCSGTFTSATADHSDPPFPSVVIRDAVVDHRYLSMRQFKDVHPSIPFTRIILYTSVHLSTSLTREDATAQLLVQNSSSFSLRAHVDYVTRVDPFLILGPYKSKKKTKRGHQVSEWQVAVSIRPAAEESELTQDEFTQQIRSLAKENGAVLSLVLPLKRFDGVIQRFDPAFDLGCVTDWESPHVYPANEKLNGEPECYYGLGDVSGTLLVSGSALYGVKKTDPRCYREIAHFAARALQGHLRYDTVAMSIVVNNSYSDRDIACGDDNKCHGVMRKRNYDLLENVRRVVESVFDEILLARPLWNRLILVPYGRLGSDANGTEASDPGRSSHRYGQYHATFFTYAMLSPYFKWAVSYDMDEFIARVPFKRRYTVSSENAEDVLDRATSSLHGYAYFTWLNFLVPDNSSNKLTEEIMKGSIPVLNG-DRDCYALGRDPTGKSAVRCDVGLGFTIHRPVIRQKSSDPTILNQIQGERRSNKLRTWHPRIGRSSSKCIFV 568
            + L++KS   V K  L ++VL+  +SL F    L+K+T ++ F       V   S   SV+IWSP   C+G F SA A  ++P FPS VIRDAV+DHRYLS  QF+ VHP+ P+ RIILY SVHLS SLTR  A AQ+LVQ + S SLRAHVDYV RVDPFL+LGPYK  KKTKRGHQ+SEWQVAVSIRP  + S L Q EF +QIR+L++E+   LSLVLPLKRFDGV +RF P+FDLGC T WE    YP    LN EP C+ G     G +L SGSALYG KK +P  Y E+AHFAARAL G LR+  VAMSIVVNNSYSDR++ACG D  CH +M+++N  LLE+VRRVVE VF+E+ + R LW+ LIL+P+ RLGSDANGTEASD  RSSHRYGQYHATFF+YAMLSP++KWAVSYD+DEFIA  P  +      ++A   LD + +   GY +F+WLNFLV DNSS +LT+ IM G  P L G  ++CYA   D TGKSAVRCD GLGFTIHRPVIR+K+ +PTIL+QIQGE  S  LRTWHPR G S  KC F 
Sbjct:   10 KLLKSKSRG-VPKKALPVSVLLAATSLLF----LSKVTTSNRFDFVEPETVGRFSGNASVTIWSPTVRCTGKFASAPASFAEPSFPSAVIRDAVIDHRYLSKEQFRTVHPNAPYLRIILYVSVHLSLSLTRRGAVAQMLVQGAPSPSLRAHVDYVVRVDPFLMLGPYKPGKKTKRGHQISEWQVAVSIRPTGDNSNLHQREFLRQIRTLSQESRGELSLVLPLKRFDGVTERFSPSFDLGCATGWELSSSYPKIPLLNKEPVCHSGARKSKGAILFSGSALYGKKKVNPEYYSEVAHFAARALNGPLRFQNVAMSIVVNNSYSDRELACGSDRNCHAIMQEKNSQLLEDVRRVVEQVFEELRVERKLWSNLILLPFCRLGSDANGTEASDACRSSHRYGQYHATFFSYAMLSPFYKWAVSYDLDEFIANTPSSKGAKFVQQDASRTLD-SVNRHSGYMFFSWLNFLVKDNSSIELTKHIMSGKRPELKGRGKECYAFTNDRTGKSAVRCDTGLGFTIHRPVIRKKNPNPTILDQIQGEHWSKSLRTWHPRFGSSRGKCHFA 564          
BLAST of Gchil10011.t1 vs. uniprot
Match: A0A2V3IM97_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM97_9FLOR)

HSP 1 Score: 273 bits (699), Expect = 4.850e-81
Identity = 177/516 (34.30%), Postives = 272/516 (52.71%), Query Frame = 0
Query:   69 SIWSPKASCSGTFTSATADHSDPPFPSVVIRDAVVDHRYLSMRQFKDVHPSIPFTRIILYTSVHLSTSLTREDATAQLLVQNSSSFSLRAHVDYVTRVDPFLI--LGPYKSKKKTKRGHQVSEWQVAVSIRPAAEESELTQDEFTQQIRSLAKENGAVLSLVLPLKRFDGVIQRFDPAFDLGCVTDWESPHVYPANEKLNGEPECYYGLGDVSGTLLVSGSALYGVKKTDPRCYREIAHFAARALQGHLRYDTVAMSIVVNNSYSD---RDIACGDDNKCHGVMRKRNYDLLENVRRVVESVFDEILLARPLWNRLILVPYGRLGSDANGTEASDPGRSSHRYGQYHATFFTYAMLSPYFKWAVSYDMDEFIARVPFKRRYTVSSENAEDVLDRATSS---LHGYAY-FTWLNFLVPDNSSNKLTEEIMKGSIPVL----NGDRDCYALGRDPTGKSAVRCDVGLGFTIHRPVIRQKSSDPTILNQIQGERR--SNKLRTWHPRIGRSS-SKCIFV 568
            SIW P+  C G+F+S ++ HS+  FP  V+RDA +D R  S+RQ    H  +P  R++L  S HLS  L   +AT +L    +++ ++R  +D V  ++         Y   + TKRGH+V+EWQV +++R     S   + +F Q +R+LA +    L L L L  FDG    F+P   LGC+  W+ P +   +      P     L   S  +L+  ++L G KK   R + E+AH+AARAL+G +R+D V + ++V+ S ++    D+ C +D        + N  L  ++ + V      I +A  ++ R++L+P+ RLG+   G E ++P   S RYGQ   TF  Y++L+ YFKWA  YD+DE+IA    K   +  + NA D+ D        +   A+   WLNF +       +T E+M G  PVL    NGD +CY L R   GK+ VR DVGLGF+IH+P+++        L   + E R  S  +R WH R+ ++  S C FV
Sbjct:   58 SIWYPELVCRGSFSSTSSPHSNASFPEAVLRDAYLDRRPASLRQAFGKHGPLPKQRVVLAISAHLSVRLEESEATVRL----ANAPNVRVSIDDVREIESTSKEKAFEYAPGRTTKRGHEVAEWQVIITLR-----STYFRRDFEQHLRNLAGDPLVQLKLQLSLSHFDGNNSTFEPRLSLGCIFGWDVPEIIQRHA-----PADIDRLQQPSSAVLLCANSLSGNKKLQNRSHAEVAHWAARALRGPVRFDIVVLPVIVDISAAECSPNDLHCFEDTS------RTNSVLFNSLAKNVAQELQRIGVAEEVFERVVLIPFCRLGAHVLGFEHNNPCSGSQRYGQIQVTFMPYSVLAKYFKWASMYDLDEYIAPHHEKGVASPLNTNASDLFDHILHENYHIKSPAFVIPWLNFRIRRQDLVNITHELMHGVTPVLVSPSNGDTNCYRLPRHRIGKAVVRYDVGLGFSIHQPIVQIPGMG---LQHNRKETRVDSMDIRVWHARLYKNRFSNCSFV 550          
The following BLAST results are available for this feature:
BLAST of Gchil10011.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IGX3_9FLOR8.070e-22560.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IM97_9FLOR4.850e-8134.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..572
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..45
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:248616..250422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10011.t1Gchil10011.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 248616..250422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10011.t1 ID=Gchil10011.t1|Name=Gchil10011.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=573bp
MAKANSRQIQRRFLQNKSEDSVFKFLLLLAVLITVSSLTFIQFALTKLTN
ASVFSARRRNVVSPPPSVSIWSPKASCSGTFTSATADHSDPPFPSVVIRD
AVVDHRYLSMRQFKDVHPSIPFTRIILYTSVHLSTSLTREDATAQLLVQN
SSSFSLRAHVDYVTRVDPFLILGPYKSKKKTKRGHQVSEWQVAVSIRPAA
EESELTQDEFTQQIRSLAKENGAVLSLVLPLKRFDGVIQRFDPAFDLGCV
TDWESPHVYPANEKLNGEPECYYGLGDVSGTLLVSGSALYGVKKTDPRCY
REIAHFAARALQGHLRYDTVAMSIVVNNSYSDRDIACGDDNKCHGVMRKR
NYDLLENVRRVVESVFDEILLARPLWNRLILVPYGRLGSDANGTEASDPG
RSSHRYGQYHATFFTYAMLSPYFKWAVSYDMDEFIARVPFKRRYTVSSEN
AEDVLDRATSSLHGYAYFTWLNFLVPDNSSNKLTEEIMKGSIPVLNGDRD
CYALGRDPTGKSAVRCDVGLGFTIHRPVIRQKSSDPTILNQIQGERRSNK
LRTWHPRIGRSSSKCIFVPKGI*
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