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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 45157.CMH144CT |
Preferred name | SBE1 |
PFAMs | Alpha-amylase,Alpha-amylase_C,CBM_48 |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K00700 |
KEGG Reaction | R02110 |
KEGG Pathway | ko00500,ko01100,ko01110,map00500,map01100,map01110 |
KEGG Module | M00565 |
GOs | GO:0000271,GO:0001678,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005982,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009314,GO:0009416,GO:0009501,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009743,GO:0009744,GO:0009746,GO:0009749,GO:0009750,GO:0009987,GO:0010021,GO:0010033,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019725,GO:0033500,GO:0033692,GO:0034284,GO:0034285,GO:0034637,GO:0034645,GO:0042221,GO:0042592,GO:0042593,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048878,GO:0050896,GO:0051716,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071214,GO:0071310,GO:0071322,GO:0071324,GO:0071326,GO:0071329,GO:0071331,GO:0071332,GO:0071333,GO:0071478,GO:0071482,GO:0071704,GO:0104004,GO:1901135,GO:1901137,GO:1901576,GO:1901700,GO:1901701,GO:2000896 |
Evalue | 0.0 |
EggNOG OGs | COG0296@1|root,KOG0470@2759|Eukaryota |
EC | 2.4.1.18 |
Description | 1,4-alpha-glucan branching enzyme activity |
COG category | G |
CAZy | CBM48,GH13 |
BRITE | ko00000,ko00001,ko00002,ko01000,ko04147 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil9424.t1 ID=Gchil9424.t1|Name=Gchil9424.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=767bp MGSENLHYVAWKDKKDGTACIRDDRYLEPFAEALRYRYAKFNELLSAIES SEKSLEQFSRGYETMGIHRVEGGVRYREWAPSAREMYFFGEFNNWDRHAI RMERDEFGIWSCFIPETEAGVSPIPHGSKVKAAVVPHQGPWLDRNPAWAT YCVQDPNTYLYDTVFWDPPEKFKWSGSDHVKRPESLRIYECHIGMGTNDL KVGSYREFADNVLPRIKDAGYTALQIMAIMEHAYYASFGYHVTNFFAISS RCGEPEDLKYLIDKAHQLGLYVLMDVVHSHASSNSMDGINNFDGTDHHYF HEGERGRHSLWDSRLFNYGHWEVIRFLLSNLRWYMEEYHFDGFRFDGVTS MLYLHSGIGVQFTGNYGEYFGFQVDVDACVYMMLANKLVHDLYPDVAVTI AEDVSGMPTLCVPVERGGLGFDFRLAMAIPDMWIETLEKQKDENWNMGNI VFTLTNRRWNEKTIGYCESHDQALVGDKTIAFWLMDAAMYTDMSCDGYPT PVIERGIALHKMIRLLTMCLSGEGYLTFMGNEFGHPEWVDFPREGNGNSY QHARRRWDLCDNEGLRYKHLYQFEKLIHALDSAHPFCRFQAHQYVVLSDE GDKVIAVEKGDRLLFVFNFHHSQSYSDYRIGTYWGGRYKLVLDSDGNNTG GHGRVHWDVVHNTRTEQWHNRPYYLQIYTPARTCQVYHCYETWEEEREKG DRESHAAKKTESGIDGLEEKMGDGEKASTKVEEVSSVAAKIDDTLQLNGS KNASSADGEKAVVNKT* back to topspliced messenger RNA >Gchil9424.t1 ID=Gchil9424.t1|Name=Gchil9424.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2301bp|location=Sequence derived from alignment at tig00004370_pilon:3981382..3983682- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGATCAGAGAACCTCCACTACGTCGCTTGGAAGGACAAGAAAGATGG CACTGCTTGTATTCGCGACGATCGTTATCTAGAACCGTTCGCGGAAGCCC TGCGATATCGCTATGCAAAGTTCAATGAGCTCTTGTCAGCCATAGAATCT AGCGAAAAATCGTTAGAACAGTTCTCCAGGGGTTATGAGACCATGGGTAT TCACCGCGTGGAGGGCGGCGTCCGCTACAGAGAGTGGGCGCCCAGCGCTC GTGAAATGTACTTCTTTGGAGAGTTTAACAACTGGGATCGCCACGCAATT CGTATGGAGCGCGACGAATTCGGGATCTGGTCCTGTTTCATTCCGGAGAC TGAGGCCGGCGTTTCTCCTATCCCTCATGGTTCTAAGGTGAAGGCTGCCG TCGTGCCCCATCAAGGGCCATGGCTCGATCGCAATCCCGCCTGGGCCACC TATTGCGTACAGGACCCCAATACTTATTTATATGATACCGTGTTTTGGGA TCCACCCGAGAAGTTCAAGTGGAGTGGGTCTGACCACGTTAAGCGACCTG AATCGCTTCGAATATATGAGTGTCACATCGGTATGGGGACGAACGATCTC AAGGTCGGCTCGTATCGCGAGTTTGCCGATAATGTGTTGCCTCGCATCAA GGACGCAGGATATACTGCGTTGCAGATTATGGCTATCATGGAACATGCTT ACTATGCTAGCTTTGGCTATCACGTTACCAATTTCTTTGCCATTAGTTCT AGATGTGGTGAACCAGAGGACCTCAAGTATCTCATCGACAAAGCTCACCA ACTTGGCTTGTATGTGCTCATGGATGTGGTTCACTCTCATGCGTCCAGCA ACTCTATGGACGGTATTAACAACTTTGATGGCACTGACCATCATTACTTT CACGAGGGCGAACGTGGCCGACATTCTTTGTGGGATTCTAGACTTTTCAA CTACGGTCATTGGGAGGTGATTCGCTTCCTTTTGTCGAACCTCAGATGGT ACATGGAGGAATACCACTTCGACGGTTTTCGTTTTGACGGGGTAACATCG ATGCTCTATTTGCACTCTGGAATTGGTGTGCAATTTACCGGGAACTATGG CGAGTATTTCGGTTTCCAAGTTGACGTGGATGCATGCGTTTACATGATGC TCGCAAACAAACTTGTACACGACCTCTATCCGGATGTTGCGGTTACAATT GCTGAGGATGTTAGCGGAATGCCGACGTTATGTGTACCTGTAGAACGAGG AGGACTCGGTTTCGATTTCCGTCTCGCCATGGCTATTCCTGACATGTGGA TCGAGACTTTGGAGAAGCAGAAAGATGAAAATTGGAATATGGGAAACATC GTTTTCACCCTCACAAATCGTCGATGGAACGAAAAGACCATTGGTTATTG CGAAAGCCATGATCAAGCACTTGTCGGGGATAAGACCATTGCGTTCTGGC TGATGGACGCTGCCATGTATACTGACATGAGTTGTGATGGCTACCCTACG CCTGTAATTGAGCGAGGCATCGCTCTCCACAAGATGATTCGGTTGCTTAC CATGTGCTTATCTGGTGAGGGGTACCTTACGTTCATGGGCAATGAGTTTG GGCATCCAGAATGGGTTGATTTTCCACGTGAAGGAAACGGTAACTCTTAT CAGCATGCGCGCCGCAGATGGGATCTCTGTGATAATGAGGGGTTGCGCTA CAAGCACTTGTACCAGTTTGAGAAACTAATCCATGCGCTGGATAGTGCAC ACCCATTCTGTCGATTCCAAGCTCATCAGTACGTAGTACTTTCGGACGAA GGGGACAAAGTGATTGCTGTTGAGAAAGGTGATCGGTTATTGTTTGTGTT CAATTTCCACCACTCGCAGTCATACAGTGATTATCGAATTGGGACCTATT GGGGAGGTCGGTATAAGCTGGTTCTTGATTCAGATGGAAATAACACTGGT GGACATGGGCGGGTACACTGGGATGTGGTCCATAATACTAGAACGGAGCA GTGGCATAATCGGCCGTACTATTTGCAGATATATACCCCTGCGCGCACTT GTCAAGTGTACCACTGCTATGAGACTTGGGAAGAAGAGAGGGAAAAGGGA GACAGGGAAAGTCACGCTGCCAAGAAGACAGAAAGTGGCATTGATGGCCT GGAGGAGAAAATGGGAGACGGTGAAAAAGCTAGCACGAAGGTTGAGGAGG TTTCCTCTGTTGCAGCCAAAATTGACGACACGCTGCAGTTGAACGGCTCA AAGAATGCGTCAAGTGCGGACGGTGAGAAGGCAGTCGTTAACAAGACATA G back to topprotein sequence of Gchil9424.t1 >Gchil9424.t1 ID=Gchil9424.t1|Name=Gchil9424.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=767bp
MGSENLHYVAWKDKKDGTACIRDDRYLEPFAEALRYRYAKFNELLSAIES SEKSLEQFSRGYETMGIHRVEGGVRYREWAPSAREMYFFGEFNNWDRHAI RMERDEFGIWSCFIPETEAGVSPIPHGSKVKAAVVPHQGPWLDRNPAWAT YCVQDPNTYLYDTVFWDPPEKFKWSGSDHVKRPESLRIYECHIGMGTNDL KVGSYREFADNVLPRIKDAGYTALQIMAIMEHAYYASFGYHVTNFFAISS RCGEPEDLKYLIDKAHQLGLYVLMDVVHSHASSNSMDGINNFDGTDHHYF HEGERGRHSLWDSRLFNYGHWEVIRFLLSNLRWYMEEYHFDGFRFDGVTS MLYLHSGIGVQFTGNYGEYFGFQVDVDACVYMMLANKLVHDLYPDVAVTI AEDVSGMPTLCVPVERGGLGFDFRLAMAIPDMWIETLEKQKDENWNMGNI VFTLTNRRWNEKTIGYCESHDQALVGDKTIAFWLMDAAMYTDMSCDGYPT PVIERGIALHKMIRLLTMCLSGEGYLTFMGNEFGHPEWVDFPREGNGNSY QHARRRWDLCDNEGLRYKHLYQFEKLIHALDSAHPFCRFQAHQYVVLSDE GDKVIAVEKGDRLLFVFNFHHSQSYSDYRIGTYWGGRYKLVLDSDGNNTG GHGRVHWDVVHNTRTEQWHNRPYYLQIYTPARTCQVYHCYETWEEEREKG DRESHAAKKTESGIDGLEEKMGDGEKASTKVEEVSSVAAKIDDTLQLNGS KNASSADGEKAVVNKT* back to topmRNA from alignment at tig00004370_pilon:3981382..3983682- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil9424.t1 ID=Gchil9424.t1|Name=Gchil9424.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2301bp|location=Sequence derived from alignment at tig00004370_pilon:3981382..3983682- (Gracilaria chilensis NLEC103_M9 male) ATGGGATCAGAGAACCTCCACTACGTCGCTTGGAAGGACAAGAAAGATGG
CACTGCTTGTATTCGCGACGATCGTTATCTAGAACCGTTCGCGGAAGCCC
TGCGATATCGCTATGCAAAGTTCAATGAGCTCTTGTCAGCCATAGAATCT
AGCGAAAAATCGTTAGAACAGTTCTCCAGGGGTTATGAGACCATGGGTAT
TCACCGCGTGGAGGGCGGCGTCCGCTACAGAGAGTGGGCGCCCAGCGCTC
GTGAAATGTACTTCTTTGGAGAGTTTAACAACTGGGATCGCCACGCAATT
CGTATGGAGCGCGACGAATTCGGGATCTGGTCCTGTTTCATTCCGGAGAC
TGAGGCCGGCGTTTCTCCTATCCCTCATGGTTCTAAGGTGAAGGCTGCCG
TCGTGCCCCATCAAGGGCCATGGCTCGATCGCAATCCCGCCTGGGCCACC
TATTGCGTACAGGACCCCAATACTTATTTATATGATACCGTGTTTTGGGA
TCCACCCGAGAAGTTCAAGTGGAGTGGGTCTGACCACGTTAAGCGACCTG
AATCGCTTCGAATATATGAGTGTCACATCGGTATGGGGACGAACGATCTC
AAGGTCGGCTCGTATCGCGAGTTTGCCGATAATGTGTTGCCTCGCATCAA
GGACGCAGGATATACTGCGTTGCAGATTATGGCTATCATGGAACATGCTT
ACTATGCTAGCTTTGGCTATCACGTTACCAATTTCTTTGCCATTAGTTCT
AGATGTGGTGAACCAGAGGACCTCAAGTATCTCATCGACAAAGCTCACCA
ACTTGGCTTGTATGTGCTCATGGATGTGGTTCACTCTCATGCGTCCAGCA
ACTCTATGGACGGTATTAACAACTTTGATGGCACTGACCATCATTACTTT
CACGAGGGCGAACGTGGCCGACATTCTTTGTGGGATTCTAGACTTTTCAA
CTACGGTCATTGGGAGGTGATTCGCTTCCTTTTGTCGAACCTCAGATGGT
ACATGGAGGAATACCACTTCGACGGTTTTCGTTTTGACGGGGTAACATCG
ATGCTCTATTTGCACTCTGGAATTGGTGTGCAATTTACCGGGAACTATGG
CGAGTATTTCGGTTTCCAAGTTGACGTGGATGCATGCGTTTACATGATGC
TCGCAAACAAACTTGTACACGACCTCTATCCGGATGTTGCGGTTACAATT
GCTGAGGATGTTAGCGGAATGCCGACGTTATGTGTACCTGTAGAACGAGG
AGGACTCGGTTTCGATTTCCGTCTCGCCATGGCTATTCCTGACATGTGGA
TCGAGACTTTGGAGAAGCAGAAAGATGAAAATTGGAATATGGGAAACATC
GTTTTCACCCTCACAAATCGTCGATGGAACGAAAAGACCATTGGTTATTG
CGAAAGCCATGATCAAGCACTTGTCGGGGATAAGACCATTGCGTTCTGGC
TGATGGACGCTGCCATGTATACTGACATGAGTTGTGATGGCTACCCTACG
CCTGTAATTGAGCGAGGCATCGCTCTCCACAAGATGATTCGGTTGCTTAC
CATGTGCTTATCTGGTGAGGGGTACCTTACGTTCATGGGCAATGAGTTTG
GGCATCCAGAATGGGTTGATTTTCCACGTGAAGGAAACGGTAACTCTTAT
CAGCATGCGCGCCGCAGATGGGATCTCTGTGATAATGAGGGGTTGCGCTA
CAAGCACTTGTACCAGTTTGAGAAACTAATCCATGCGCTGGATAGTGCAC
ACCCATTCTGTCGATTCCAAGCTCATCAGTACGTAGTACTTTCGGACGAA
GGGGACAAAGTGATTGCTGTTGAGAAAGGTGATCGGTTATTGTTTGTGTT
CAATTTCCACCACTCGCAGTCATACAGTGATTATCGAATTGGGACCTATT
GGGGAGGTCGGTATAAGCTGGTTCTTGATTCAGATGGAAATAACACTGGT
GGACATGGGCGGGTACACTGGGATGTGGTCCATAATACTAGAACGGAGCA
GTGGCATAATCGGCCGTACTATTTGCAGATATATACCCCTGCGCGCACTT
GTCAAGTGTACCACTGCTATGAGACTTGGGAAGAAGAGAGGGAAAAGGGA
GACAGGGAAAGTCACGCTGCCAAGAAGACAGAAAGTGGCATTGATGGCCT
GGAGGAGAAAATGGGAGACGGTGAAAAAGCTAGCACGAAGGTTGAGGAGG
TTTCCTCTGTTGCAGCCAAAATTGACGACACGCTGCAGTTGAACGGCTCA
AAGAATGCGTCAAGTGCGGACGGTGAGAAGGCAGTCGTTAACAAGACATA
G back to topCoding sequence (CDS) from alignment at tig00004370_pilon:3981382..3983682- >Gchil9424.t1 ID=Gchil9424.t1|Name=Gchil9424.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2301bp|location=Sequence derived from alignment at tig00004370_pilon:3981382..3983682- (Gracilaria chilensis NLEC103_M9 male) ATGGGATCAGAGAACCTCCACTACGTCGCTTGGAAGGACAAGAAAGATGG CACTGCTTGTATTCGCGACGATCGTTATCTAGAACCGTTCGCGGAAGCCC TGCGATATCGCTATGCAAAGTTCAATGAGCTCTTGTCAGCCATAGAATCT AGCGAAAAATCGTTAGAACAGTTCTCCAGGGGTTATGAGACCATGGGTAT TCACCGCGTGGAGGGCGGCGTCCGCTACAGAGAGTGGGCGCCCAGCGCTC GTGAAATGTACTTCTTTGGAGAGTTTAACAACTGGGATCGCCACGCAATT CGTATGGAGCGCGACGAATTCGGGATCTGGTCCTGTTTCATTCCGGAGAC TGAGGCCGGCGTTTCTCCTATCCCTCATGGTTCTAAGGTGAAGGCTGCCG TCGTGCCCCATCAAGGGCCATGGCTCGATCGCAATCCCGCCTGGGCCACC TATTGCGTACAGGACCCCAATACTTATTTATATGATACCGTGTTTTGGGA TCCACCCGAGAAGTTCAAGTGGAGTGGGTCTGACCACGTTAAGCGACCTG AATCGCTTCGAATATATGAGTGTCACATCGGTATGGGGACGAACGATCTC AAGGTCGGCTCGTATCGCGAGTTTGCCGATAATGTGTTGCCTCGCATCAA GGACGCAGGATATACTGCGTTGCAGATTATGGCTATCATGGAACATGCTT ACTATGCTAGCTTTGGCTATCACGTTACCAATTTCTTTGCCATTAGTTCT AGATGTGGTGAACCAGAGGACCTCAAGTATCTCATCGACAAAGCTCACCA ACTTGGCTTGTATGTGCTCATGGATGTGGTTCACTCTCATGCGTCCAGCA ACTCTATGGACGGTATTAACAACTTTGATGGCACTGACCATCATTACTTT CACGAGGGCGAACGTGGCCGACATTCTTTGTGGGATTCTAGACTTTTCAA CTACGGTCATTGGGAGGTGATTCGCTTCCTTTTGTCGAACCTCAGATGGT ACATGGAGGAATACCACTTCGACGGTTTTCGTTTTGACGGGGTAACATCG ATGCTCTATTTGCACTCTGGAATTGGTGTGCAATTTACCGGGAACTATGG CGAGTATTTCGGTTTCCAAGTTGACGTGGATGCATGCGTTTACATGATGC TCGCAAACAAACTTGTACACGACCTCTATCCGGATGTTGCGGTTACAATT GCTGAGGATGTTAGCGGAATGCCGACGTTATGTGTACCTGTAGAACGAGG AGGACTCGGTTTCGATTTCCGTCTCGCCATGGCTATTCCTGACATGTGGA TCGAGACTTTGGAGAAGCAGAAAGATGAAAATTGGAATATGGGAAACATC GTTTTCACCCTCACAAATCGTCGATGGAACGAAAAGACCATTGGTTATTG CGAAAGCCATGATCAAGCACTTGTCGGGGATAAGACCATTGCGTTCTGGC TGATGGACGCTGCCATGTATACTGACATGAGTTGTGATGGCTACCCTACG CCTGTAATTGAGCGAGGCATCGCTCTCCACAAGATGATTCGGTTGCTTAC CATGTGCTTATCTGGTGAGGGGTACCTTACGTTCATGGGCAATGAGTTTG GGCATCCAGAATGGGTTGATTTTCCACGTGAAGGAAACGGTAACTCTTAT CAGCATGCGCGCCGCAGATGGGATCTCTGTGATAATGAGGGGTTGCGCTA CAAGCACTTGTACCAGTTTGAGAAACTAATCCATGCGCTGGATAGTGCAC ACCCATTCTGTCGATTCCAAGCTCATCAGTACGTAGTACTTTCGGACGAA GGGGACAAAGTGATTGCTGTTGAGAAAGGTGATCGGTTATTGTTTGTGTT CAATTTCCACCACTCGCAGTCATACAGTGATTATCGAATTGGGACCTATT GGGGAGGTCGGTATAAGCTGGTTCTTGATTCAGATGGAAATAACACTGGT GGACATGGGCGGGTACACTGGGATGTGGTCCATAATACTAGAACGGAGCA GTGGCATAATCGGCCGTACTATTTGCAGATATATACCCCTGCGCGCACTT GTCAAGTGTACCACTGCTATGAGACTTGGGAAGAAGAGAGGGAAAAGGGA GACAGGGAAAGTCACGCTGCCAAGAAGACAGAAAGTGGCATTGATGGCCT GGAGGAGAAAATGGGAGACGGTGAAAAAGCTAGCACGAAGGTTGAGGAGG TTTCCTCTGTTGCAGCCAAAATTGACGACACGCTGCAGTTGAACGGCTCA AAGAATGCGTCAAGTGCGGACGGTGAGAAGGCAGTCGTTAACAAGACATA G back to top
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