Gchil9169.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil9169.t1
Unique NameGchil9169.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length350
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2191740..2192789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9169Gchil9169Gracilaria chilensis NLEC103_M9 malegenetig00004370_pilon 2191740..2192789 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9169.t1.stop1Gchil9169.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004370_pilon 2191740..2191742 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9169.t1.CDS1Gchil9169.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004370_pilon 2191740..2192789 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9169.t1.exon1Gchil9169.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004370_pilon 2191740..2192789 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9169.t1.start1Gchil9169.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004370_pilon 2192787..2192789 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9169.t1Gchil9169.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004370_pilon 2191740..2192789 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil9169.t1 ID=Gchil9169.t1|Name=Gchil9169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=350bp
MGRATRLPRAAPSARAGGRIWGGSSERRALRAGAVATTKVARARQTAAHG
RDMRRLRARWWRTRESRAAAQQQHQPQHQHHRRRGFHVQADDGAATAASA
AAAAAREVSSLGTALGAATAENSALRQQCATQRDATAATIASLRDAHAAV
HAALGAHRRRAVALAADNRALRAAAATATADRVALRRVIAHQRARIDRLD
AACAAAADALATVRVGFADVVASAERLLHVETRATRGAAADLCARLHALV
QCVDAFHALFGRADDLPLVTPVREHVVPAQGDAHLSHHRRHAPIADELFV
ASADEIMPLDEPPSPPPPPPPPPPPPPPRATRTRSLPFATAPLRHPRSR*
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spliced messenger RNA

>Gchil9169.t1 ID=Gchil9169.t1|Name=Gchil9169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00004370_pilon:2191740..2192789- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGCGCGCCACGCGCCTGCCACGTGCCGCGCCAAGCGCACGCGCTGG
CGGTCGCATCTGGGGCGGGTCATCAGAGCGTCGTGCTCTGCGCGCAGGCG
CGGTCGCGACGACGAAGGTCGCGCGCGCTCGCCAGACGGCCGCGCACGGC
CGAGACATGCGGCGGCTGCGCGCGCGCTGGTGGCGAACGCGCGAGTCGCG
CGCCGCCGCGCAGCAGCAACACCAGCCGCAGCACCAGCACCATCGTCGCC
GCGGGTTTCATGTGCAAGCGGACGATGGTGCGGCCACCGCCGCCTCCGCC
GCCGCCGCCGCCGCGCGCGAGGTGTCGTCGTTGGGCACCGCGCTGGGAGC
CGCCACGGCGGAGAACAGCGCGCTACGGCAGCAGTGCGCCACGCAGCGCG
ACGCCACCGCCGCCACCATTGCTTCGCTGCGCGACGCACACGCCGCAGTG
CACGCCGCGCTTGGCGCGCATCGTCGTCGTGCCGTCGCGCTTGCCGCCGA
CAATCGCGCCTTGCGCGCCGCAGCCGCCACCGCCACGGCCGACCGCGTCG
CGCTGCGTCGCGTCATCGCGCACCAGCGCGCGCGCATCGACCGGCTGGAC
GCGGCCTGCGCGGCTGCGGCCGACGCGTTGGCCACCGTGCGCGTCGGCTT
TGCTGACGTCGTCGCCTCCGCAGAGCGTCTTTTACACGTCGAGACGCGCG
CCACGCGCGGCGCTGCCGCCGACTTGTGTGCCCGTCTACACGCTTTGGTG
CAATGCGTGGACGCCTTTCACGCGCTCTTCGGTCGCGCCGACGACCTGCC
GCTTGTCACACCCGTGCGCGAGCATGTCGTTCCTGCGCAGGGGGACGCGC
ACCTCTCGCACCATCGCCGCCACGCCCCCATCGCCGACGAGCTGTTCGTG
GCCTCCGCCGACGAGATTATGCCGCTGGACGAACCACCGTCGCCGCCGCC
GCCGCCGCCGCCACCGCCGCCGCCACCGCCGCCGCGCGCCACGCGCACGC
GCTCCCTACCCTTTGCCACCGCCCCTCTGCGCCATCCCCGCTCCCGGTAA
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protein sequence of Gchil9169.t1

>Gchil9169.t1 ID=Gchil9169.t1|Name=Gchil9169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=350bp
MGRATRLPRAAPSARAGGRIWGGSSERRALRAGAVATTKVARARQTAAHG
RDMRRLRARWWRTRESRAAAQQQHQPQHQHHRRRGFHVQADDGAATAASA
AAAAAREVSSLGTALGAATAENSALRQQCATQRDATAATIASLRDAHAAV
HAALGAHRRRAVALAADNRALRAAAATATADRVALRRVIAHQRARIDRLD
AACAAAADALATVRVGFADVVASAERLLHVETRATRGAAADLCARLHALV
QCVDAFHALFGRADDLPLVTPVREHVVPAQGDAHLSHHRRHAPIADELFV
ASADEIMPLDEPPSPPPPPPPPPPPPPPRATRTRSLPFATAPLRHPRSR*
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mRNA from alignment at tig00004370_pilon:2191740..2192789-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil9169.t1 ID=Gchil9169.t1|Name=Gchil9169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00004370_pilon:2191740..2192789- (Gracilaria chilensis NLEC103_M9 male)
ATGGGGCGCGCCACGCGCCTGCCACGTGCCGCGCCAAGCGCACGCGCTGG
CGGTCGCATCTGGGGCGGGTCATCAGAGCGTCGTGCTCTGCGCGCAGGCG
CGGTCGCGACGACGAAGGTCGCGCGCGCTCGCCAGACGGCCGCGCACGGC
CGAGACATGCGGCGGCTGCGCGCGCGCTGGTGGCGAACGCGCGAGTCGCG
CGCCGCCGCGCAGCAGCAACACCAGCCGCAGCACCAGCACCATCGTCGCC
GCGGGTTTCATGTGCAAGCGGACGATGGTGCGGCCACCGCCGCCTCCGCC
GCCGCCGCCGCCGCGCGCGAGGTGTCGTCGTTGGGCACCGCGCTGGGAGC
CGCCACGGCGGAGAACAGCGCGCTACGGCAGCAGTGCGCCACGCAGCGCG
ACGCCACCGCCGCCACCATTGCTTCGCTGCGCGACGCACACGCCGCAGTG
CACGCCGCGCTTGGCGCGCATCGTCGTCGTGCCGTCGCGCTTGCCGCCGA
CAATCGCGCCTTGCGCGCCGCAGCCGCCACCGCCACGGCCGACCGCGTCG
CGCTGCGTCGCGTCATCGCGCACCAGCGCGCGCGCATCGACCGGCTGGAC
GCGGCCTGCGCGGCTGCGGCCGACGCGTTGGCCACCGTGCGCGTCGGCTT
TGCTGACGTCGTCGCCTCCGCAGAGCGTCTTTTACACGTCGAGACGCGCG
CCACGCGCGGCGCTGCCGCCGACTTGTGTGCCCGTCTACACGCTTTGGTG
CAATGCGTGGACGCCTTTCACGCGCTCTTCGGTCGCGCCGACGACCTGCC
GCTTGTCACACCCGTGCGCGAGCATGTCGTTCCTGCGCAGGGGGACGCGC
ACCTCTCGCACCATCGCCGCCACGCCCCCATCGCCGACGAGCTGTTCGTG
GCCTCCGCCGACGAGATTATGCCGCTGGACGAACCACCGTCGCCGCCGCC
GCCGCCGCCGCCACCGCCGCCGCCACCGCCGCCGCGCGCCACGCGCACGC
GCTCCCTACCCTTTGCCACCGCCCCTCTGCGCCATCCCCGCTCCCGGTAA
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Coding sequence (CDS) from alignment at tig00004370_pilon:2191740..2192789-

>Gchil9169.t1 ID=Gchil9169.t1|Name=Gchil9169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1050bp|location=Sequence derived from alignment at tig00004370_pilon:2191740..2192789- (Gracilaria chilensis NLEC103_M9 male)
ATGGGGCGCGCCACGCGCCTGCCACGTGCCGCGCCAAGCGCACGCGCTGG
CGGTCGCATCTGGGGCGGGTCATCAGAGCGTCGTGCTCTGCGCGCAGGCG
CGGTCGCGACGACGAAGGTCGCGCGCGCTCGCCAGACGGCCGCGCACGGC
CGAGACATGCGGCGGCTGCGCGCGCGCTGGTGGCGAACGCGCGAGTCGCG
CGCCGCCGCGCAGCAGCAACACCAGCCGCAGCACCAGCACCATCGTCGCC
GCGGGTTTCATGTGCAAGCGGACGATGGTGCGGCCACCGCCGCCTCCGCC
GCCGCCGCCGCCGCGCGCGAGGTGTCGTCGTTGGGCACCGCGCTGGGAGC
CGCCACGGCGGAGAACAGCGCGCTACGGCAGCAGTGCGCCACGCAGCGCG
ACGCCACCGCCGCCACCATTGCTTCGCTGCGCGACGCACACGCCGCAGTG
CACGCCGCGCTTGGCGCGCATCGTCGTCGTGCCGTCGCGCTTGCCGCCGA
CAATCGCGCCTTGCGCGCCGCAGCCGCCACCGCCACGGCCGACCGCGTCG
CGCTGCGTCGCGTCATCGCGCACCAGCGCGCGCGCATCGACCGGCTGGAC
GCGGCCTGCGCGGCTGCGGCCGACGCGTTGGCCACCGTGCGCGTCGGCTT
TGCTGACGTCGTCGCCTCCGCAGAGCGTCTTTTACACGTCGAGACGCGCG
CCACGCGCGGCGCTGCCGCCGACTTGTGTGCCCGTCTACACGCTTTGGTG
CAATGCGTGGACGCCTTTCACGCGCTCTTCGGTCGCGCCGACGACCTGCC
GCTTGTCACACCCGTGCGCGAGCATGTCGTTCCTGCGCAGGGGGACGCGC
ACCTCTCGCACCATCGCCGCCACGCCCCCATCGCCGACGAGCTGTTCGTG
GCCTCCGCCGACGAGATTATGCCGCTGGACGAACCACCGTCGCCGCCGCC
GCCGCCGCCGCCACCGCCGCCGCCACCGCCGCCGCGCGCCACGCGCACGC
GCTCCCTACCCTTTGCCACCGCCCCTCTGCGCCATCCCCGCTCCCGGTAA
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