Gchil9144.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil9144.t1
Unique NameGchil9144.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length347
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1997725..1998765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9144Gchil9144Gracilaria chilensis NLEC103_M9 malegenetig00004370_pilon 1997725..1998765 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9144.t1.stop1Gchil9144.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004370_pilon 1997725..1997727 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9144.t1.CDS1Gchil9144.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004370_pilon 1997725..1998765 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9144.t1.exon1Gchil9144.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004370_pilon 1997725..1998765 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9144.t1.start1Gchil9144.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004370_pilon 1998763..1998765 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9144.t1Gchil9144.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004370_pilon 1997725..1998765 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil9144.t1 ID=Gchil9144.t1|Name=Gchil9144.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=347bp
MPDVLSSFSKNFHGPSPDHPLRCTPFPTENESNNVTCTEQYMLQPQRFDM
VIKRQEGLRQGWAIDASHPAQLVINANNILEHLRALPENPPHSRWVRDLY
SYIQTHTTKILTHPELHEEPPQVLKHVLTQDCLLASEDEVLQTVITYSKE
CGGGKNCARHLETSEENESFALKCLIPLVRILSVSTKVFVRDMEPLQMLS
ETQLICKYRHDALAREDDSDVNKVQPRFSRHLVRGSATVAESTHPYYVGH
DELLEEVRTCPSGYRTLIEFDRRCCIGEGATLTFYADSEATVVLGRWRDL
WRGRGRPIRVWVIDTSRFWVGLRCAFDGVACWGWKLVATPLLSEEE*
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spliced messenger RNA

>Gchil9144.t1 ID=Gchil9144.t1|Name=Gchil9144.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1041bp|location=Sequence derived from alignment at tig00004370_pilon:1997725..1998765- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAGACGTGCTCTCCTCATTCAGCAAAAATTTTCACGGCCCATCCCC
GGATCACCCGCTACGATGCACCCCGTTTCCGACGGAAAACGAATCCAACA
ACGTTACATGCACAGAGCAATACATGCTCCAGCCACAACGCTTCGACATG
GTCATCAAACGTCAAGAAGGACTTCGCCAAGGCTGGGCAATTGACGCTTC
TCATCCAGCTCAGTTGGTAATCAACGCGAATAACATTCTGGAACACTTAA
GAGCGCTACCAGAAAACCCGCCACATTCTAGATGGGTCCGCGACTTGTAC
TCATACATCCAAACGCACACTACGAAAATTCTTACCCACCCCGAACTACA
CGAAGAACCTCCGCAGGTGCTCAAGCATGTTCTGACGCAGGATTGTCTCC
TGGCTTCGGAGGATGAAGTTCTGCAGACAGTGATAACATATTCCAAGGAG
TGCGGAGGGGGAAAAAATTGTGCCCGTCACCTCGAAACTTCGGAGGAAAA
CGAAAGTTTTGCCCTTAAATGTCTCATTCCATTAGTCCGTATCCTGTCCG
TGTCCACTAAAGTTTTTGTTAGAGATATGGAACCTCTACAAATGTTATCC
GAAACACAGCTAATTTGTAAGTACAGACATGATGCTCTTGCGCGGGAGGA
CGACAGCGATGTGAACAAGGTTCAACCTCGTTTCAGCAGACATCTGGTCC
GAGGGAGTGCAACAGTTGCCGAATCAACGCATCCATATTACGTTGGACAC
GATGAACTGCTTGAAGAAGTTCGTACTTGCCCCTCAGGCTATCGCACTTT
GATAGAGTTTGATCGACGTTGTTGCATTGGTGAAGGCGCTACATTAACAT
TCTACGCTGATTCGGAAGCCACTGTTGTGCTAGGCAGATGGAGAGATTTG
TGGAGAGGTCGTGGGCGGCCGATTCGCGTTTGGGTGATTGATACCTCGCG
ATTTTGGGTAGGTCTACGATGTGCATTTGATGGTGTGGCTTGTTGGGGCT
GGAAGCTAGTCGCTACTCCTTTGCTTTCTGAAGAAGAGTGA
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protein sequence of Gchil9144.t1

>Gchil9144.t1 ID=Gchil9144.t1|Name=Gchil9144.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=347bp
MPDVLSSFSKNFHGPSPDHPLRCTPFPTENESNNVTCTEQYMLQPQRFDM
VIKRQEGLRQGWAIDASHPAQLVINANNILEHLRALPENPPHSRWVRDLY
SYIQTHTTKILTHPELHEEPPQVLKHVLTQDCLLASEDEVLQTVITYSKE
CGGGKNCARHLETSEENESFALKCLIPLVRILSVSTKVFVRDMEPLQMLS
ETQLICKYRHDALAREDDSDVNKVQPRFSRHLVRGSATVAESTHPYYVGH
DELLEEVRTCPSGYRTLIEFDRRCCIGEGATLTFYADSEATVVLGRWRDL
WRGRGRPIRVWVIDTSRFWVGLRCAFDGVACWGWKLVATPLLSEEE*
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mRNA from alignment at tig00004370_pilon:1997725..1998765-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil9144.t1 ID=Gchil9144.t1|Name=Gchil9144.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1041bp|location=Sequence derived from alignment at tig00004370_pilon:1997725..1998765- (Gracilaria chilensis NLEC103_M9 male)
ATGCCAGACGTGCTCTCCTCATTCAGCAAAAATTTTCACGGCCCATCCCC
GGATCACCCGCTACGATGCACCCCGTTTCCGACGGAAAACGAATCCAACA
ACGTTACATGCACAGAGCAATACATGCTCCAGCCACAACGCTTCGACATG
GTCATCAAACGTCAAGAAGGACTTCGCCAAGGCTGGGCAATTGACGCTTC
TCATCCAGCTCAGTTGGTAATCAACGCGAATAACATTCTGGAACACTTAA
GAGCGCTACCAGAAAACCCGCCACATTCTAGATGGGTCCGCGACTTGTAC
TCATACATCCAAACGCACACTACGAAAATTCTTACCCACCCCGAACTACA
CGAAGAACCTCCGCAGGTGCTCAAGCATGTTCTGACGCAGGATTGTCTCC
TGGCTTCGGAGGATGAAGTTCTGCAGACAGTGATAACATATTCCAAGGAG
TGCGGAGGGGGAAAAAATTGTGCCCGTCACCTCGAAACTTCGGAGGAAAA
CGAAAGTTTTGCCCTTAAATGTCTCATTCCATTAGTCCGTATCCTGTCCG
TGTCCACTAAAGTTTTTGTTAGAGATATGGAACCTCTACAAATGTTATCC
GAAACACAGCTAATTTGTAAGTACAGACATGATGCTCTTGCGCGGGAGGA
CGACAGCGATGTGAACAAGGTTCAACCTCGTTTCAGCAGACATCTGGTCC
GAGGGAGTGCAACAGTTGCCGAATCAACGCATCCATATTACGTTGGACAC
GATGAACTGCTTGAAGAAGTTCGTACTTGCCCCTCAGGCTATCGCACTTT
GATAGAGTTTGATCGACGTTGTTGCATTGGTGAAGGCGCTACATTAACAT
TCTACGCTGATTCGGAAGCCACTGTTGTGCTAGGCAGATGGAGAGATTTG
TGGAGAGGTCGTGGGCGGCCGATTCGCGTTTGGGTGATTGATACCTCGCG
ATTTTGGGTAGGTCTACGATGTGCATTTGATGGTGTGGCTTGTTGGGGCT
GGAAGCTAGTCGCTACTCCTTTGCTTTCTGAAGAAGAGTGA
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Coding sequence (CDS) from alignment at tig00004370_pilon:1997725..1998765-

>Gchil9144.t1 ID=Gchil9144.t1|Name=Gchil9144.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1041bp|location=Sequence derived from alignment at tig00004370_pilon:1997725..1998765- (Gracilaria chilensis NLEC103_M9 male)
ATGCCAGACGTGCTCTCCTCATTCAGCAAAAATTTTCACGGCCCATCCCC
GGATCACCCGCTACGATGCACCCCGTTTCCGACGGAAAACGAATCCAACA
ACGTTACATGCACAGAGCAATACATGCTCCAGCCACAACGCTTCGACATG
GTCATCAAACGTCAAGAAGGACTTCGCCAAGGCTGGGCAATTGACGCTTC
TCATCCAGCTCAGTTGGTAATCAACGCGAATAACATTCTGGAACACTTAA
GAGCGCTACCAGAAAACCCGCCACATTCTAGATGGGTCCGCGACTTGTAC
TCATACATCCAAACGCACACTACGAAAATTCTTACCCACCCCGAACTACA
CGAAGAACCTCCGCAGGTGCTCAAGCATGTTCTGACGCAGGATTGTCTCC
TGGCTTCGGAGGATGAAGTTCTGCAGACAGTGATAACATATTCCAAGGAG
TGCGGAGGGGGAAAAAATTGTGCCCGTCACCTCGAAACTTCGGAGGAAAA
CGAAAGTTTTGCCCTTAAATGTCTCATTCCATTAGTCCGTATCCTGTCCG
TGTCCACTAAAGTTTTTGTTAGAGATATGGAACCTCTACAAATGTTATCC
GAAACACAGCTAATTTGTAAGTACAGACATGATGCTCTTGCGCGGGAGGA
CGACAGCGATGTGAACAAGGTTCAACCTCGTTTCAGCAGACATCTGGTCC
GAGGGAGTGCAACAGTTGCCGAATCAACGCATCCATATTACGTTGGACAC
GATGAACTGCTTGAAGAAGTTCGTACTTGCCCCTCAGGCTATCGCACTTT
GATAGAGTTTGATCGACGTTGTTGCATTGGTGAAGGCGCTACATTAACAT
TCTACGCTGATTCGGAAGCCACTGTTGTGCTAGGCAGATGGAGAGATTTG
TGGAGAGGTCGTGGGCGGCCGATTCGCGTTTGGGTGATTGATACCTCGCG
ATTTTGGGTAGGTCTACGATGTGCATTTGATGGTGTGGCTTGTTGGGGCT
GGAAGCTAGTCGCTACTCCTTTGCTTTCTGAAGAAGAGTGA
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