Gchil8950.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil8950.t1
Unique NameGchil8950.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length495
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:267810..269294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8950Gchil8950Gracilaria chilensis NLEC103_M9 malegenetig00004370_pilon 267810..269294 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8950.t1.start1Gchil8950.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004370_pilon 267810..267812 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8950.t1.CDS1Gchil8950.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004370_pilon 267810..269294 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8950.t1.exon1Gchil8950.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004370_pilon 267810..269294 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8950.t1.stop1Gchil8950.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004370_pilon 269292..269294 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8950.t1Gchil8950.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004370_pilon 267810..269294 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil8950.t1 ID=Gchil8950.t1|Name=Gchil8950.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=495bp
MATSLLFSVFVLAFAIRDALATCTTPTPSPGSSSTPKPTNPPWHEGRYFF
SSADAPIAKTLQTVKPFVTEVNNAIDILENVEGIILKEQIYRLSASASNL
ATRKPRICNLEDASWGSAAVDQMLLRGFPANLTTSCITDFEFVDAASEVK
MRHVVEKVDRMVHESAQDIATAAGANFSEPAGIYDWPFKTTTEDCYVNVL
GAFRTQQDWYLNIGITNWNQQKHVGEFARRYLNENIGRGVKAGPLKLYTR
PKDDAINQTHVQVDATTMAVSHRGTANPAVFKDIPFRENLAVIRALDNAQ
VYSQQVSDALSPSSVLILVLPLWLNLIPIALLADVGNKATLMYAMLSDVL
TVVPLSIKGVELISIGSAVFYGSVLRISSDTNGKQSDMAAAEIYVARCTS
KRSVLPTGIAFLTVSIVFMILGLLAELVAKRYAIRHRRRMYGRISMSSTR
SSSSARDRRRSRSNSTPMAETRGAQHLAMELESYDNDYDDDHRL*
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spliced messenger RNA

>Gchil8950.t1 ID=Gchil8950.t1|Name=Gchil8950.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1485bp|location=Sequence derived from alignment at tig00004370_pilon:267810..269294+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGACGTCACTCCTTTTTTCGGTTTTCGTACTAGCATTCGCCATTCG
AGATGCGCTTGCAACCTGCACCACACCTACTCCTAGCCCTGGTTCGTCAA
GTACCCCAAAACCGACCAACCCACCGTGGCACGAAGGACGCTATTTTTTC
TCCAGCGCCGACGCTCCTATAGCAAAAACATTACAAACGGTGAAACCATT
CGTTACAGAAGTTAACAATGCGATCGACATTCTTGAAAATGTTGAGGGCA
TCATTTTGAAAGAGCAGATTTATCGTCTGTCAGCGAGTGCTTCCAATTTA
GCCACCCGTAAACCCCGTATCTGCAACTTGGAGGATGCATCTTGGGGAAG
TGCGGCTGTCGATCAAATGTTGCTTCGGGGTTTTCCAGCGAACCTGACAA
CATCTTGTATAACTGACTTTGAATTTGTAGACGCTGCATCTGAAGTTAAA
ATGCGCCATGTTGTCGAAAAAGTGGACAGGATGGTACACGAGAGTGCTCA
AGATATCGCAACAGCAGCAGGGGCCAACTTCAGTGAACCGGCTGGAATCT
ATGACTGGCCCTTTAAAACCACTACCGAAGATTGCTACGTAAACGTACTC
GGTGCCTTTCGTACGCAACAGGATTGGTATCTCAACATTGGTATTACCAA
TTGGAATCAACAAAAACATGTGGGCGAATTCGCTAGACGTTACTTGAATG
AGAATATTGGTCGCGGAGTAAAGGCCGGTCCTTTGAAGCTTTACACTAGA
CCAAAAGATGACGCCATCAACCAGACACACGTTCAAGTAGATGCAACCAC
AATGGCTGTTTCACATCGCGGTACTGCCAATCCTGCCGTGTTTAAGGACA
TTCCTTTTAGGGAGAACCTTGCTGTCATAAGAGCACTTGATAACGCTCAG
GTATATTCTCAGCAAGTGAGTGATGCGCTTAGTCCATCGAGTGTTCTCAT
TCTCGTGCTGCCACTTTGGTTGAATCTGATTCCGATTGCGCTACTGGCTG
ATGTGGGAAATAAAGCGACATTGATGTATGCGATGTTGAGTGACGTGCTC
ACAGTTGTTCCTTTGAGTATCAAGGGAGTTGAGCTTATATCCATTGGATC
CGCCGTGTTTTATGGATCAGTCCTTCGCATTTCATCTGATACCAATGGTA
AACAGTCTGATATGGCCGCAGCAGAGATATACGTTGCGAGATGTACTTCG
AAGCGGTCGGTGCTGCCGACGGGGATTGCTTTCTTGACAGTCTCAATCGT
CTTCATGATTCTAGGCTTGTTGGCTGAGTTGGTTGCGAAACGATATGCCA
TTAGACATCGACGAAGAATGTATGGAAGAATATCGATGTCGAGCACGCGA
TCTTCATCGAGTGCCAGGGACCGACGGCGCTCGAGGAGCAACAGTACGCC
GATGGCCGAAACCAGAGGTGCTCAACATTTGGCAATGGAACTGGAATCGT
ATGATAACGACTACGATGATGATCATAGATTGTGA
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protein sequence of Gchil8950.t1

>Gchil8950.t1 ID=Gchil8950.t1|Name=Gchil8950.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=495bp
MATSLLFSVFVLAFAIRDALATCTTPTPSPGSSSTPKPTNPPWHEGRYFF
SSADAPIAKTLQTVKPFVTEVNNAIDILENVEGIILKEQIYRLSASASNL
ATRKPRICNLEDASWGSAAVDQMLLRGFPANLTTSCITDFEFVDAASEVK
MRHVVEKVDRMVHESAQDIATAAGANFSEPAGIYDWPFKTTTEDCYVNVL
GAFRTQQDWYLNIGITNWNQQKHVGEFARRYLNENIGRGVKAGPLKLYTR
PKDDAINQTHVQVDATTMAVSHRGTANPAVFKDIPFRENLAVIRALDNAQ
VYSQQVSDALSPSSVLILVLPLWLNLIPIALLADVGNKATLMYAMLSDVL
TVVPLSIKGVELISIGSAVFYGSVLRISSDTNGKQSDMAAAEIYVARCTS
KRSVLPTGIAFLTVSIVFMILGLLAELVAKRYAIRHRRRMYGRISMSSTR
SSSSARDRRRSRSNSTPMAETRGAQHLAMELESYDNDYDDDHRL*
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mRNA from alignment at tig00004370_pilon:267810..269294+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil8950.t1 ID=Gchil8950.t1|Name=Gchil8950.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1485bp|location=Sequence derived from alignment at tig00004370_pilon:267810..269294+ (Gracilaria chilensis NLEC103_M9 male)
ATGGCGACGTCACTCCTTTTTTCGGTTTTCGTACTAGCATTCGCCATTCG
AGATGCGCTTGCAACCTGCACCACACCTACTCCTAGCCCTGGTTCGTCAA
GTACCCCAAAACCGACCAACCCACCGTGGCACGAAGGACGCTATTTTTTC
TCCAGCGCCGACGCTCCTATAGCAAAAACATTACAAACGGTGAAACCATT
CGTTACAGAAGTTAACAATGCGATCGACATTCTTGAAAATGTTGAGGGCA
TCATTTTGAAAGAGCAGATTTATCGTCTGTCAGCGAGTGCTTCCAATTTA
GCCACCCGTAAACCCCGTATCTGCAACTTGGAGGATGCATCTTGGGGAAG
TGCGGCTGTCGATCAAATGTTGCTTCGGGGTTTTCCAGCGAACCTGACAA
CATCTTGTATAACTGACTTTGAATTTGTAGACGCTGCATCTGAAGTTAAA
ATGCGCCATGTTGTCGAAAAAGTGGACAGGATGGTACACGAGAGTGCTCA
AGATATCGCAACAGCAGCAGGGGCCAACTTCAGTGAACCGGCTGGAATCT
ATGACTGGCCCTTTAAAACCACTACCGAAGATTGCTACGTAAACGTACTC
GGTGCCTTTCGTACGCAACAGGATTGGTATCTCAACATTGGTATTACCAA
TTGGAATCAACAAAAACATGTGGGCGAATTCGCTAGACGTTACTTGAATG
AGAATATTGGTCGCGGAGTAAAGGCCGGTCCTTTGAAGCTTTACACTAGA
CCAAAAGATGACGCCATCAACCAGACACACGTTCAAGTAGATGCAACCAC
AATGGCTGTTTCACATCGCGGTACTGCCAATCCTGCCGTGTTTAAGGACA
TTCCTTTTAGGGAGAACCTTGCTGTCATAAGAGCACTTGATAACGCTCAG
GTATATTCTCAGCAAGTGAGTGATGCGCTTAGTCCATCGAGTGTTCTCAT
TCTCGTGCTGCCACTTTGGTTGAATCTGATTCCGATTGCGCTACTGGCTG
ATGTGGGAAATAAAGCGACATTGATGTATGCGATGTTGAGTGACGTGCTC
ACAGTTGTTCCTTTGAGTATCAAGGGAGTTGAGCTTATATCCATTGGATC
CGCCGTGTTTTATGGATCAGTCCTTCGCATTTCATCTGATACCAATGGTA
AACAGTCTGATATGGCCGCAGCAGAGATATACGTTGCGAGATGTACTTCG
AAGCGGTCGGTGCTGCCGACGGGGATTGCTTTCTTGACAGTCTCAATCGT
CTTCATGATTCTAGGCTTGTTGGCTGAGTTGGTTGCGAAACGATATGCCA
TTAGACATCGACGAAGAATGTATGGAAGAATATCGATGTCGAGCACGCGA
TCTTCATCGAGTGCCAGGGACCGACGGCGCTCGAGGAGCAACAGTACGCC
GATGGCCGAAACCAGAGGTGCTCAACATTTGGCAATGGAACTGGAATCGT
ATGATAACGACTACGATGATGATCATAGATTGTGA
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Coding sequence (CDS) from alignment at tig00004370_pilon:267810..269294+

>Gchil8950.t1 ID=Gchil8950.t1|Name=Gchil8950.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1485bp|location=Sequence derived from alignment at tig00004370_pilon:267810..269294+ (Gracilaria chilensis NLEC103_M9 male)
ATGGCGACGTCACTCCTTTTTTCGGTTTTCGTACTAGCATTCGCCATTCG
AGATGCGCTTGCAACCTGCACCACACCTACTCCTAGCCCTGGTTCGTCAA
GTACCCCAAAACCGACCAACCCACCGTGGCACGAAGGACGCTATTTTTTC
TCCAGCGCCGACGCTCCTATAGCAAAAACATTACAAACGGTGAAACCATT
CGTTACAGAAGTTAACAATGCGATCGACATTCTTGAAAATGTTGAGGGCA
TCATTTTGAAAGAGCAGATTTATCGTCTGTCAGCGAGTGCTTCCAATTTA
GCCACCCGTAAACCCCGTATCTGCAACTTGGAGGATGCATCTTGGGGAAG
TGCGGCTGTCGATCAAATGTTGCTTCGGGGTTTTCCAGCGAACCTGACAA
CATCTTGTATAACTGACTTTGAATTTGTAGACGCTGCATCTGAAGTTAAA
ATGCGCCATGTTGTCGAAAAAGTGGACAGGATGGTACACGAGAGTGCTCA
AGATATCGCAACAGCAGCAGGGGCCAACTTCAGTGAACCGGCTGGAATCT
ATGACTGGCCCTTTAAAACCACTACCGAAGATTGCTACGTAAACGTACTC
GGTGCCTTTCGTACGCAACAGGATTGGTATCTCAACATTGGTATTACCAA
TTGGAATCAACAAAAACATGTGGGCGAATTCGCTAGACGTTACTTGAATG
AGAATATTGGTCGCGGAGTAAAGGCCGGTCCTTTGAAGCTTTACACTAGA
CCAAAAGATGACGCCATCAACCAGACACACGTTCAAGTAGATGCAACCAC
AATGGCTGTTTCACATCGCGGTACTGCCAATCCTGCCGTGTTTAAGGACA
TTCCTTTTAGGGAGAACCTTGCTGTCATAAGAGCACTTGATAACGCTCAG
GTATATTCTCAGCAAGTGAGTGATGCGCTTAGTCCATCGAGTGTTCTCAT
TCTCGTGCTGCCACTTTGGTTGAATCTGATTCCGATTGCGCTACTGGCTG
ATGTGGGAAATAAAGCGACATTGATGTATGCGATGTTGAGTGACGTGCTC
ACAGTTGTTCCTTTGAGTATCAAGGGAGTTGAGCTTATATCCATTGGATC
CGCCGTGTTTTATGGATCAGTCCTTCGCATTTCATCTGATACCAATGGTA
AACAGTCTGATATGGCCGCAGCAGAGATATACGTTGCGAGATGTACTTCG
AAGCGGTCGGTGCTGCCGACGGGGATTGCTTTCTTGACAGTCTCAATCGT
CTTCATGATTCTAGGCTTGTTGGCTGAGTTGGTTGCGAAACGATATGCCA
TTAGACATCGACGAAGAATGTATGGAAGAATATCGATGTCGAGCACGCGA
TCTTCATCGAGTGCCAGGGACCGACGGCGCTCGAGGAGCAACAGTACGCC
GATGGCCGAAACCAGAGGTGCTCAACATTTGGCAATGGAACTGGAATCGT
ATGATAACGACTACGATGATGATCATAGATTGTGA
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