Gchil8697.t2 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil8697.t2
Unique NameGchil8697.t2
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length114
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:1295407..1295748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8697Gchil8697Gracilaria chilensis NLEC103_M9 malegenetig00000088_pilon 1295407..1297440 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8697.t2.stop1Gchil8697.t2.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000088_pilon 1295407..1295409 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8697.t2.CDS1Gchil8697.t2.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000088_pilon 1295407..1295748 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8697.t2.exon1Gchil8697.t2.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000088_pilon 1295407..1295748 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8697.t2.start1Gchil8697.t2.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000088_pilon 1295746..1295748 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8697.t2Gchil8697.t2Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000088_pilon 1295407..1295748 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil8697.t2 ID=Gchil8697.t2|Name=Gchil8697.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=114bp
MRNRDRALKCDLNGQKGNVKPISNAGKWRDNVGGCELEIVPDRDGEVLVC
TMDGNSDDAGGKCDQGAEVALINEDSENWVTTKTKEGELVDEEVLEQGAV
LSDQEFNDTASAG*
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spliced messenger RNA

>Gchil8697.t2 ID=Gchil8697.t2|Name=Gchil8697.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=342bp|location=Sequence derived from alignment at tig00000088_pilon:1295407..1295748- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGAAATAGGGACCGTGCGTTGAAATGCGATCTAAACGGGCAAAAGGG
CAATGTCAAGCCCATTTCAAACGCGGGAAAGTGGCGTGACAATGTGGGTG
GTTGTGAATTGGAAATCGTACCCGACAGAGATGGGGAAGTTTTGGTGTGT
ACCATGGATGGAAATTCAGATGATGCTGGTGGCAAATGTGATCAAGGAGC
AGAGGTGGCGCTCATAAATGAAGATTCGGAAAATTGGGTAACAACCAAAA
CGAAGGAGGGTGAATTGGTTGATGAGGAAGTCCTTGAGCAGGGAGCTGTT
CTGAGCGATCAAGAGTTCAATGACACGGCGAGTGCTGGATAG
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protein sequence of Gchil8697.t2

>Gchil8697.t2 ID=Gchil8697.t2|Name=Gchil8697.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=114bp
MRNRDRALKCDLNGQKGNVKPISNAGKWRDNVGGCELEIVPDRDGEVLVC
TMDGNSDDAGGKCDQGAEVALINEDSENWVTTKTKEGELVDEEVLEQGAV
LSDQEFNDTASAG*
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mRNA from alignment at tig00000088_pilon:1295407..1295748-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil8697.t2 ID=Gchil8697.t2|Name=Gchil8697.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=342bp|location=Sequence derived from alignment at tig00000088_pilon:1295407..1295748- (Gracilaria chilensis NLEC103_M9 male)
ATGAGAAATAGGGACCGTGCGTTGAAATGCGATCTAAACGGGCAAAAGGG
CAATGTCAAGCCCATTTCAAACGCGGGAAAGTGGCGTGACAATGTGGGTG
GTTGTGAATTGGAAATCGTACCCGACAGAGATGGGGAAGTTTTGGTGTGT
ACCATGGATGGAAATTCAGATGATGCTGGTGGCAAATGTGATCAAGGAGC
AGAGGTGGCGCTCATAAATGAAGATTCGGAAAATTGGGTAACAACCAAAA
CGAAGGAGGGTGAATTGGTTGATGAGGAAGTCCTTGAGCAGGGAGCTGTT
CTGAGCGATCAAGAGTTCAATGACACGGCGAGTGCTGGATAG
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Coding sequence (CDS) from alignment at tig00000088_pilon:1295407..1295748-

>Gchil8697.t2 ID=Gchil8697.t2|Name=Gchil8697.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=342bp|location=Sequence derived from alignment at tig00000088_pilon:1295407..1295748- (Gracilaria chilensis NLEC103_M9 male)
ATGAGAAATAGGGACCGTGCGTTGAAATGCGATCTAAACGGGCAAAAGGG
CAATGTCAAGCCCATTTCAAACGCGGGAAAGTGGCGTGACAATGTGGGTG
GTTGTGAATTGGAAATCGTACCCGACAGAGATGGGGAAGTTTTGGTGTGT
ACCATGGATGGAAATTCAGATGATGCTGGTGGCAAATGTGATCAAGGAGC
AGAGGTGGCGCTCATAAATGAAGATTCGGAAAATTGGGTAACAACCAAAA
CGAAGGAGGGTGAATTGGTTGATGAGGAAGTCCTTGAGCAGGGAGCTGTT
CTGAGCGATCAAGAGTTCAATGACACGGCGAGTGCTGGATAG
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