Gchil8628.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil8628.t1
Unique NameGchil8628.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length345
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:774984..776018 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8628Gchil8628Gracilaria chilensis NLEC103_M9 malegenetig00000088_pilon 774984..776018 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8628.t1.stop1Gchil8628.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000088_pilon 774984..774986 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8628.t1.CDS1Gchil8628.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000088_pilon 774984..776018 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8628.t1.exon1Gchil8628.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000088_pilon 774984..776018 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8628.t1.start1Gchil8628.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000088_pilon 776016..776018 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8628.t1Gchil8628.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000088_pilon 774984..776018 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil8628.t1 ID=Gchil8628.t1|Name=Gchil8628.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=345bp
MQDHFHSNSSALHSEQSHAASLQDLPEDVQQQLISQLKQSDQAHLATSCQ
YFHQLVAPLLRRAFRCVSCQAPLFEPKELALYDAQTSSPRSTFGPSSNLA
KRTFFQLVECSPQRDVAKFGMVLDQRRGAANFHVLRHLMQTVYKDGRFPL
PQQLQCVQALRCAQCGVFVGFRHGDGNAVRDFVHHDFVEMVDSKARLMTL
DGHYLQPPEGIVNCANPQCRNVLFERDDMLPWSHVLASSRLTDMNAYLEW
DHSWAGAATAGQPAFFVKRLRDGSVSVRNVRAEHLRQGNMVVGDVHCSQC
QSHIGWKLLSEVAEGGMLHNYDQIGRYGIIRSAVAPTEPRNLHI*
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spliced messenger RNA

>Gchil8628.t1 ID=Gchil8628.t1|Name=Gchil8628.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1035bp|location=Sequence derived from alignment at tig00000088_pilon:774984..776018- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGACCACTTCCATTCTAATTCATCCGCGCTTCACTCCGAGCAGTC
TCACGCTGCCTCGCTGCAAGATTTGCCGGAGGATGTGCAGCAGCAGTTGA
TCTCGCAGCTCAAGCAGTCTGACCAGGCCCATCTTGCCACCTCTTGCCAG
TACTTTCACCAACTGGTCGCCCCCCTGTTACGCCGTGCCTTCCGCTGCGT
CAGCTGTCAAGCTCCCCTTTTCGAACCCAAGGAGCTTGCGCTTTATGACG
CCCAAACTTCCTCTCCGAGAAGCACCTTTGGTCCATCTAGCAATCTCGCC
AAACGCACCTTCTTCCAGCTGGTTGAGTGCAGCCCGCAGAGAGATGTCGC
CAAATTTGGCATGGTGCTTGACCAGCGTCGGGGTGCCGCCAATTTTCATG
TGTTGCGTCACTTGATGCAGACCGTTTACAAGGACGGCCGCTTTCCACTG
CCCCAACAATTGCAATGCGTGCAGGCGTTGAGATGCGCCCAATGTGGCGT
GTTTGTCGGCTTTCGACACGGTGATGGAAACGCAGTGCGGGACTTTGTGC
ATCATGACTTTGTGGAAATGGTTGATTCAAAAGCTCGACTCATGACCTTG
GACGGACATTATCTCCAACCACCAGAAGGGATCGTCAACTGTGCAAACCC
GCAGTGCCGAAACGTGCTGTTCGAACGCGATGACATGTTGCCATGGTCAC
ACGTGCTGGCCAGCTCGCGACTCACCGACATGAATGCCTACCTGGAGTGG
GACCACTCTTGGGCTGGTGCTGCTACAGCGGGTCAGCCAGCGTTCTTCGT
CAAGCGTTTGAGAGACGGGAGTGTTTCTGTGAGAAACGTTCGCGCCGAGC
ATCTTCGCCAAGGAAACATGGTTGTCGGTGATGTGCATTGCTCGCAGTGT
CAGTCTCACATTGGGTGGAAATTGTTGTCAGAGGTTGCTGAGGGGGGTAT
GTTGCACAACTATGATCAGATAGGCCGCTACGGAATCATCCGTAGCGCGG
TTGCGCCCACCGAACCTCGCAACCTGCACATTTGA
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protein sequence of Gchil8628.t1

>Gchil8628.t1 ID=Gchil8628.t1|Name=Gchil8628.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=345bp
MQDHFHSNSSALHSEQSHAASLQDLPEDVQQQLISQLKQSDQAHLATSCQ
YFHQLVAPLLRRAFRCVSCQAPLFEPKELALYDAQTSSPRSTFGPSSNLA
KRTFFQLVECSPQRDVAKFGMVLDQRRGAANFHVLRHLMQTVYKDGRFPL
PQQLQCVQALRCAQCGVFVGFRHGDGNAVRDFVHHDFVEMVDSKARLMTL
DGHYLQPPEGIVNCANPQCRNVLFERDDMLPWSHVLASSRLTDMNAYLEW
DHSWAGAATAGQPAFFVKRLRDGSVSVRNVRAEHLRQGNMVVGDVHCSQC
QSHIGWKLLSEVAEGGMLHNYDQIGRYGIIRSAVAPTEPRNLHI*
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mRNA from alignment at tig00000088_pilon:774984..776018-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil8628.t1 ID=Gchil8628.t1|Name=Gchil8628.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1035bp|location=Sequence derived from alignment at tig00000088_pilon:774984..776018- (Gracilaria chilensis NLEC103_M9 male)
ATGCAAGACCACTTCCATTCTAATTCATCCGCGCTTCACTCCGAGCAGTC
TCACGCTGCCTCGCTGCAAGATTTGCCGGAGGATGTGCAGCAGCAGTTGA
TCTCGCAGCTCAAGCAGTCTGACCAGGCCCATCTTGCCACCTCTTGCCAG
TACTTTCACCAACTGGTCGCCCCCCTGTTACGCCGTGCCTTCCGCTGCGT
CAGCTGTCAAGCTCCCCTTTTCGAACCCAAGGAGCTTGCGCTTTATGACG
CCCAAACTTCCTCTCCGAGAAGCACCTTTGGTCCATCTAGCAATCTCGCC
AAACGCACCTTCTTCCAGCTGGTTGAGTGCAGCCCGCAGAGAGATGTCGC
CAAATTTGGCATGGTGCTTGACCAGCGTCGGGGTGCCGCCAATTTTCATG
TGTTGCGTCACTTGATGCAGACCGTTTACAAGGACGGCCGCTTTCCACTG
CCCCAACAATTGCAATGCGTGCAGGCGTTGAGATGCGCCCAATGTGGCGT
GTTTGTCGGCTTTCGACACGGTGATGGAAACGCAGTGCGGGACTTTGTGC
ATCATGACTTTGTGGAAATGGTTGATTCAAAAGCTCGACTCATGACCTTG
GACGGACATTATCTCCAACCACCAGAAGGGATCGTCAACTGTGCAAACCC
GCAGTGCCGAAACGTGCTGTTCGAACGCGATGACATGTTGCCATGGTCAC
ACGTGCTGGCCAGCTCGCGACTCACCGACATGAATGCCTACCTGGAGTGG
GACCACTCTTGGGCTGGTGCTGCTACAGCGGGTCAGCCAGCGTTCTTCGT
CAAGCGTTTGAGAGACGGGAGTGTTTCTGTGAGAAACGTTCGCGCCGAGC
ATCTTCGCCAAGGAAACATGGTTGTCGGTGATGTGCATTGCTCGCAGTGT
CAGTCTCACATTGGGTGGAAATTGTTGTCAGAGGTTGCTGAGGGGGGTAT
GTTGCACAACTATGATCAGATAGGCCGCTACGGAATCATCCGTAGCGCGG
TTGCGCCCACCGAACCTCGCAACCTGCACATTTGA
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Coding sequence (CDS) from alignment at tig00000088_pilon:774984..776018-

>Gchil8628.t1 ID=Gchil8628.t1|Name=Gchil8628.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1035bp|location=Sequence derived from alignment at tig00000088_pilon:774984..776018- (Gracilaria chilensis NLEC103_M9 male)
ATGCAAGACCACTTCCATTCTAATTCATCCGCGCTTCACTCCGAGCAGTC
TCACGCTGCCTCGCTGCAAGATTTGCCGGAGGATGTGCAGCAGCAGTTGA
TCTCGCAGCTCAAGCAGTCTGACCAGGCCCATCTTGCCACCTCTTGCCAG
TACTTTCACCAACTGGTCGCCCCCCTGTTACGCCGTGCCTTCCGCTGCGT
CAGCTGTCAAGCTCCCCTTTTCGAACCCAAGGAGCTTGCGCTTTATGACG
CCCAAACTTCCTCTCCGAGAAGCACCTTTGGTCCATCTAGCAATCTCGCC
AAACGCACCTTCTTCCAGCTGGTTGAGTGCAGCCCGCAGAGAGATGTCGC
CAAATTTGGCATGGTGCTTGACCAGCGTCGGGGTGCCGCCAATTTTCATG
TGTTGCGTCACTTGATGCAGACCGTTTACAAGGACGGCCGCTTTCCACTG
CCCCAACAATTGCAATGCGTGCAGGCGTTGAGATGCGCCCAATGTGGCGT
GTTTGTCGGCTTTCGACACGGTGATGGAAACGCAGTGCGGGACTTTGTGC
ATCATGACTTTGTGGAAATGGTTGATTCAAAAGCTCGACTCATGACCTTG
GACGGACATTATCTCCAACCACCAGAAGGGATCGTCAACTGTGCAAACCC
GCAGTGCCGAAACGTGCTGTTCGAACGCGATGACATGTTGCCATGGTCAC
ACGTGCTGGCCAGCTCGCGACTCACCGACATGAATGCCTACCTGGAGTGG
GACCACTCTTGGGCTGGTGCTGCTACAGCGGGTCAGCCAGCGTTCTTCGT
CAAGCGTTTGAGAGACGGGAGTGTTTCTGTGAGAAACGTTCGCGCCGAGC
ATCTTCGCCAAGGAAACATGGTTGTCGGTGATGTGCATTGCTCGCAGTGT
CAGTCTCACATTGGGTGGAAATTGTTGTCAGAGGTTGCTGAGGGGGGTAT
GTTGCACAACTATGATCAGATAGGCCGCTACGGAATCATCCGTAGCGCGG
TTGCGCCCACCGAACCTCGCAACCTGCACATTTGA
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