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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LEZ6 |
| PFAMs | Anoct_dimer,Anoctamin,ERK-JNK_inhib |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K19327,ko:K19480,ko:K19497,ko:K19501 |
| KEGG TC | 1.A.17.1,1.A.17.1.2,1.A.17.1.21,1.A.17.1.3 |
| KEGG Pathway | ko04740,map04740 |
| Evalue | 3.8e-59 |
| EggNOG OGs | KOG2514@1|root,KOG2514@2759|Eukaryota |
| Description | intracellular chloride channel activity |
| COG category | U |
| BRITE | ko00000,ko00001,ko04040 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil855.t1 ID=Gchil855.t1|Name=Gchil855.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=892bp MSRNISGGSSRQRSRASSSTPDVARRPPSRSNTVYYDALGIPFDSSSRDI SDVNIASLSAADLPAEPVPTTAGARPHWGWDYVFVFRLPRALKRQLAADA ADAADPADGPAIKRAELAAAAEGRPNDALHQEEDEEEEDGKSAQRLRERV EILARLNSAGFVFSQLLVPSEQLIFLRLSLPLDGLKQAAQHVGMELQLKP EYGGGYLVFAPHREHVYVNHEMEKSSGCYFAPADRSLLIMNVLQSKEHWG CGLNIERLLFEKKVEQAFALHSMVEKRRLVKEVVWRQWWNPIRRPPFQEL KDYLGARVTFYFVFVSFYARRLLPLALLSIPVFVIYRTVKNAGVLVIIRW VFSIGLVLWTTYFLENWKRRTAMVNTKWGLHDYQEDTLDDTRVQFEGEQR YGFYSKGGFVALDDLAMHGDYCLPSGNSEQSCSGDSSGSGGGGSGGSKQT DRQNMVERQGSKVLLPRNPYQDPRKQRNAMAVSAGVTAVFVIIVGALTFL LLWFRNEIVEWSRVHITDGFAEGVPGVLNGVLISVFDSIWRPVSMWLTRR ENHRTNQQFENSLIYKRFAFMFVSNYISLFYIAFVRKYLEKTCAVGKVGS DCMRELENQMLSLVLTKATIGQVMEIGVPWVMSTVGQVRARARARKERQR GRRGGGVGGTDYNRYVAESKLSKYHSTMEDYSELVMQFGFLALFGVAFPL ASVVNMVNNTLEVRTDAYKLLQLSQRVDADDAADIGAWYAILQLLNVLSV WSNAALLIFTSESLELLLPPDAESSRAWLLRLAAFLALEHVLLGVKAAGA ALVRDVPNAARRTLARQAFDIARHFDVAWTDTFRGAPLLHLPPDQLRVAQ RHAHLFDVDPMHSLDFVSPVSSVAPVAPVAPVSSVEHVARA* back to topspliced messenger RNA >Gchil855.t1 ID=Gchil855.t1|Name=Gchil855.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2676bp|location=Sequence derived from alignment at tig00000017_pilon:528158..530931+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAGCAGGAATATCAGTGGCGGTTCGAGCCGCCAGCGCTCTCGGGCATC GTCTTCCACGCCAGATGTCGCGCGCAGACCGCCTTCTCGCTCAAATACCG TTTATTACGACGCTCTCGGCATTCCGTTTGACTCTTCATCGCGAGACATT TCCGACGTGAATATCGCCTCCCTGAGCGCCGCTGACTTGCCCGCCGAACC TGTCCCAACCACTGCCGGAGCCCGGCCGCATTGGGGATGGGACTATGTGT TTGTGTTTCGGTTGCCGCGCGCGCTGAAGAGACAGCTGGCGGCGGATGCC GCCGATGCCGCCGATCCAGCCGATGGGCCTGCCATTAAACGCGCTGAGCT GGCGGCGGCGGCGGAAGGGCGCCCAAATGACGCTCTCCATCAGGAGGAAG ACGAAGAGGAGGAAGACGGTAAGAGCGCCCAACGCTTGCGTGAACGCGTG GAGATTCTTGCTAGATTGAATAGCGCCGGCTTTGTGTTTTCGCAGCTGCT CGTTCCGTCGGAACAGCTCATCTTTCTGCGATTGTCACTGCCGCTTGACG GCCTCAAACAAGCCGCCCAACATGTGGGAATGGAGCTGCAGCTTAAGCCA GAGTATGGCGGCGGCTACTTGGTATTTGCTCCGCATCGCGAGCATGTGTA CGTCAACCATGAAATGGAAAAGAGTAGCGGCTGTTACTTTGCCCCGGCTG ATCGCTCATTGTTGATTATGAACGTGTTGCAGTCCAAGGAGCATTGGGGT TGTGGCTTGAATATTGAGAGACTCCTGTTTGAAAAAAAAGTTGAACAGGC GTTTGCGCTGCATTCTATGGTGGAAAAACGCCGTCTTGTGAAGGAGGTGG TTTGGAGACAGTGGTGGAACCCAATTCGACGGCCTCCGTTTCAAGAGCTT AAGGACTATCTTGGAGCGCGTGTGACGTTTTATTTTGTGTTTGTGAGCTT TTATGCGAGACGGTTACTTCCGCTTGCACTGTTGTCCATTCCTGTGTTTG TCATTTATCGCACGGTGAAAAACGCCGGAGTACTGGTGATTATACGATGG GTGTTTTCAATTGGATTGGTTCTATGGACCACATACTTTTTGGAGAATTG GAAGCGGAGAACTGCGATGGTGAACACTAAATGGGGCCTGCACGACTACC AGGAAGACACATTGGACGATACGCGAGTGCAGTTCGAGGGAGAGCAGCGG TACGGATTCTACAGCAAGGGCGGTTTCGTAGCGCTAGACGACCTGGCAAT GCACGGAGACTATTGCCTGCCGAgcggaaatagcgagcaaagctgcagtg gcgacagcagcggcagtggcggcggcggcagcggcggcagcaaacagacg gACAGGCAGAATATGGTGGAGCGACAGGGGAGCAAAGTGCTGCTACCTCG CAATCCGTACCAAGACCCGCGTAAGCAGCGAAATGCAATGGCAGTTTCTG CGGGAGTGACGGCGGTGTTCGTGATCATTGTTGGGGCGTTGACGTTCCTG TTGTTGTGGTTCCGAAATGAGATTGTGGAGTGGAGCAGAGTGCATATTAC GGATGGATTTGCGGAAGGTGTGCCTGGTGTGCTGAACGGAGTGCTGATCT CTGTATTTGACTCGATATGGCGGCCGGTGTCGATGTGGCTGACGCGGCGG GAGAATCATCGGACGAACCAGCAATTCGAGAACAGCCTGATCTACAAGCG GTTCGCGTTCATGTTTGTGTCAAACTACATTTCGTTATTCTACATTGCGT TTGTGCGAAAGTACCTGGAGAAGACGTGCGCGGTGGGCAAGGTGGGGAGC GATTGCATGCGCGAGCTGGAGAACCAGATGCTGTCGCTGGTGCTGACAAA GGCGACGATCGGGCAGGTGATGGAAATCGGAGTGCCGTGGGTGATGAGCA CGGTggggcaggtgcgggcgcgggcgcgggcgcgaaaagagcgacagcgg ggcagacgcggcgggggtgtgggcgGGACGGATTACAACCGCTATGTAGC GGAGAGCAAGCTGAGCAAGTACCACTCGACGATGGAAGACTACAGCGAAC TGGTGATGCAATTCGGGTTCCTGGCGCTGTTCGGGGTGGCGTTCCCGCTG GCCAGCGTGGTGAACATGGTGAACAACACGTTGGAGGTGCGCACGGACGC ATACAAGCTGCTGCAGCTGTCGCAACGCGTGGACGCAGACGACGCGGCGG ACATCGGCGCATGGTACGCCATCCTTCAACTGCTCAACGTACTGTCGGTG TGGAGCAACGCGGCGTTGCTCATCTTCACGTCCGAGTCGCTGGAATTGTT GCTCCCGCCCGACGCCGAGAGCTCCCGCGCGTGGCTGCTGCGCTTGGCGG CCTTCCTGGCGCTGGAGCACGTGCTGCTGGGCGTCAAGGCGGCCGGCGCT GCGCTGGTGCGCGACGTGCCCAACGCGGCGCGCCGCACGCTAGCGCGTCA GGCTTTTGACATTGCGCGCCACTTCGACGTCGCCTGGACCGATACCTTCC GCGGCGCCCCGCTGCTGCATCTGCCTCCTGACCAGCTGCGCGTCGCGCAG CGCCATGCACACCTCTTCGACGTGGACCCTATGCACTCCCTCGACTTTGT TTCACCCGTGTCCTCCGTGGCTCCCGTGGCTCCCGTGGCTCCCGTGTCCT CCGTGGAACACGTCGCTCGAGCGTAA back to topprotein sequence of Gchil855.t1 >Gchil855.t1 ID=Gchil855.t1|Name=Gchil855.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=892bp
MSRNISGGSSRQRSRASSSTPDVARRPPSRSNTVYYDALGIPFDSSSRDI SDVNIASLSAADLPAEPVPTTAGARPHWGWDYVFVFRLPRALKRQLAADA ADAADPADGPAIKRAELAAAAEGRPNDALHQEEDEEEEDGKSAQRLRERV EILARLNSAGFVFSQLLVPSEQLIFLRLSLPLDGLKQAAQHVGMELQLKP EYGGGYLVFAPHREHVYVNHEMEKSSGCYFAPADRSLLIMNVLQSKEHWG CGLNIERLLFEKKVEQAFALHSMVEKRRLVKEVVWRQWWNPIRRPPFQEL KDYLGARVTFYFVFVSFYARRLLPLALLSIPVFVIYRTVKNAGVLVIIRW VFSIGLVLWTTYFLENWKRRTAMVNTKWGLHDYQEDTLDDTRVQFEGEQR YGFYSKGGFVALDDLAMHGDYCLPSGNSEQSCSGDSSGSGGGGSGGSKQT DRQNMVERQGSKVLLPRNPYQDPRKQRNAMAVSAGVTAVFVIIVGALTFL LLWFRNEIVEWSRVHITDGFAEGVPGVLNGVLISVFDSIWRPVSMWLTRR ENHRTNQQFENSLIYKRFAFMFVSNYISLFYIAFVRKYLEKTCAVGKVGS DCMRELENQMLSLVLTKATIGQVMEIGVPWVMSTVGQVRARARARKERQR GRRGGGVGGTDYNRYVAESKLSKYHSTMEDYSELVMQFGFLALFGVAFPL ASVVNMVNNTLEVRTDAYKLLQLSQRVDADDAADIGAWYAILQLLNVLSV WSNAALLIFTSESLELLLPPDAESSRAWLLRLAAFLALEHVLLGVKAAGA ALVRDVPNAARRTLARQAFDIARHFDVAWTDTFRGAPLLHLPPDQLRVAQ RHAHLFDVDPMHSLDFVSPVSSVAPVAPVAPVSSVEHVARA* back to topmRNA from alignment at tig00000017_pilon:528158..530931+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil855.t1 ID=Gchil855.t1|Name=Gchil855.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2774bp|location=Sequence derived from alignment at tig00000017_pilon:528158..530931+ (Gracilaria chilensis NLEC103_M9 male) ATGAGCAGGAATATCAGTGGCGGTTCGAGCCGCCAGCGCTCTCGGGCATC
GTCTTCCACGCCAGATGTCGCGCGCAGACCGCCTTCTCGCTCAAATACCG
TTTATTACGACGCTCTCGGCATTCCGTTTGACTCTTCATCGCGAGACATT
TCCGACGTGAATATCGCCTCCCTGAGCGCCGCTGACTTGCCCGCCGAACC
TGTCCCAACCACTGCCGGAGCCCGGCCGCATTGGGGATGGGACTATGTGT
TTGTGTTTCGGTTGCCGCGCGCGCTGAAGAGACAGCTGGCGGCGGATGCC
GCCGATGCCGCCGATCCAGCCGATGGGCCTGCCATTAAACGCGCTGAGCT
GGCGGCGGCGGCGGAAGGGCGCCCAAATGACGCTCTCCATCAGGAGGAAG
ACGAAGAGGAGGAAGACGGTAAGAGCGCCCAACGCTTGCGTGAACGCGTG
GAGATTCTTGCTAGATTGAATAGCGCCGGCTTTGTGTTTTCGCAGCTGCT
CGTTCCGTCGGAACAGCTCATCTTTCTGCGATTGTCACTGCCGCTTGACG
GCCTCAAACAAGCCGCCCAACATGTGGGAATGGAGCTGCAGCTTAAGCCA
GAGTATGGCGGCGGCTACTTGGTATTTGCTCCGCATCGCGAGCATGTGTA
CGTCAACCATGAAATGGAAAAGAGTAGCGGCTGTTACTTTGCCCCGGCTG
ATCGCTCATTGTTGATTATGAACGTGTTGCAGTCCAAGGAGCATTGGGGT
TGTGGCTTGAATATTGAGAGACTCCTGTTTGAAAAAAAAGTTGAACAGGC
GTTTGCGCTGCATTCTATGGTGGAAAAACGCCGTCTTGTGAAGGAGGTGG
TTTGGAGACAGTGGTGGAACCCAATTCGACGGCCTCCGTTTCAAGAGCTT
AAGGACTATCTTGGAGGTAAGTTTGGAATGCATTTGTTTGCCCAGCCCAG
AAGGATGTGAGCGACTGACCACCATGGTGACAATGGGAATAACTTGTCTT
TTCTCTGGCGGTAGCGCGTGTGACGTTTTATTTTGTGTTTGTGAGCTTTT
ATGCGAGACGGTTACTTCCGCTTGCACTGTTGTCCATTCCTGTGTTTGTC
ATTTATCGCACGGTGAAAAACGCCGGAGTACTGGTGATTATACGATGGGT
GTTTTCAATTGGATTGGTTCTATGGACCACATACTTTTTGGAGAATTGGA
AGCGGAGAACTGCGATGGTGAACACTAAATGGGGCCTGCACGACTACCAG
GAAGACACATTGGACGATACGCGAGTGCAGTTCGAGGGAGAGCAGCGGTA
CGGATTCTACAGCAAGGGCGGTTTCGTAGCGCTAGACGACCTGGCAATGC
ACGGAGACTATTGCCTGCCGAgcggaaatagcgagcaaagctgcagtggc
gacagcagcggcagtggcggcggcggcagcggcggcagcaaacagacggA
CAGGCAGAATATGGTGGAGCGACAGGGGAGCAAAGTGCTGCTACCTCGCA
ATCCGTACCAAGACCCGCGTAAGCAGCGAAATGCAATGGCAGTTTCTGCG
GGAGTGACGGCGGTGTTCGTGATCATTGTTGGGGCGTTGACGTTCCTGTT
GTTGTGGTTCCGAAATGAGATTGTGGAGTGGAGCAGAGTGCATATTACGG
ATGGATTTGCGGAAGGTGTGCCTGGTGTGCTGAACGGAGTGCTGATCTCT
GTATTTGACTCGATATGGCGGCCGGTGTCGATGTGGCTGACGCGGCGGGA
GAATCATCGGACGAACCAGCAATTCGAGAACAGCCTGATCTACAAGCGGT
TCGCGTTCATGTTTGTGTCAAACTACATTTCGTTATTCTACATTGCGTTT
GTGCGAAAGTACCTGGAGAAGACGTGCGCGGTGGGCAAGGTGGGGAGCGA
TTGCATGCGCGAGCTGGAGAACCAGATGCTGTCGCTGGTGCTGACAAAGG
CGACGATCGGGCAGGTGATGGAAATCGGAGTGCCGTGGGTGATGAGCACG
GTggggcaggtgcgggcgcgggcgcgggcgcgaaaagagcgacagcgggg
cagacgcggcgggggtgtgggcgGGACGGATTACAACCGCTATGTAGCGG
AGAGCAAGCTGAGCAAGTACCACTCGACGATGGAAGACTACAGCGAACTG
GTGATGCAATTCGGGTTCCTGGCGCTGTTCGGGGTGGCGTTCCCGCTGGC
CAGCGTGGTGAACATGGTGAACAACACGTTGGAGGTGCGCACGGACGCAT
ACAAGCTGCTGCAGCTGTCGCAACGCGTGGACGCAGACGACGCGGCGGAC
ATCGGCGCATGGTACGCCATCCTTCAACTGCTCAACGTACTGTCGGTGTG
GAGCAACGCGGCGTTGCTCATCTTCACGTCCGAGTCGCTGGAATTGTTGC
TCCCGCCCGACGCCGAGAGCTCCCGCGCGTGGCTGCTGCGCTTGGCGGCC
TTCCTGGCGCTGGAGCACGTGCTGCTGGGCGTCAAGGCGGCCGGCGCTGC
GCTGGTGCGCGACGTGCCCAACGCGGCGCGCCGCACGCTAGCGCGTCAGG
CTTTTGACATTGCGCGCCACTTCGACGTCGCCTGGACCGATACCTTCCGC
GGCGCCCCGCTGCTGCATCTGCCTCCTGACCAGCTGCGCGTCGCGCAGCG
CCATGCACACCTCTTCGACGTGGACCCTATGCACTCCCTCGACTTTGTTT
CACCCGTGTCCTCCGTGGCTCCCGTGGCTCCCGTGGCTCCCGTGTCCTCC
GTGGAACACGTCGCTCGAGCGTAA back to topCoding sequence (CDS) from alignment at tig00000017_pilon:528158..530931+ >Gchil855.t1 ID=Gchil855.t1|Name=Gchil855.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2676bp|location=Sequence derived from alignment at tig00000017_pilon:528158..530931+ (Gracilaria chilensis NLEC103_M9 male) ATGAGCAGGAATATCAGTGGCGGTTCGAGCCGCCAGCGCTCTCGGGCATC GTCTTCCACGCCAGATGTCGCGCGCAGACCGCCTTCTCGCTCAAATACCG TTTATTACGACGCTCTCGGCATTCCGTTTGACTCTTCATCGCGAGACATT TCCGACGTGAATATCGCCTCCCTGAGCGCCGCTGACTTGCCCGCCGAACC TGTCCCAACCACTGCCGGAGCCCGGCCGCATTGGGGATGGGACTATGTGT TTGTGTTTCGGTTGCCGCGCGCGCTGAAGAGACAGCTGGCGGCGGATGCC GCCGATGCCGCCGATCCAGCCGATGGGCCTGCCATTAAACGCGCTGAGCT GGCGGCGGCGGCGGAAGGGCGCCCAAATGACGCTCTCCATCAGGAGGAAG ACGAAGAGGAGGAAGACGGTAAGAGCGCCCAACGCTTGCGTGAACGCGTG GAGATTCTTGCTAGATTGAATAGCGCCGGCTTTGTGTTTTCGCAGCTGCT CGTTCCGTCGGAACAGCTCATCTTTCTGCGATTGTCACTGCCGCTTGACG GCCTCAAACAAGCCGCCCAACATGTGGGAATGGAGCTGCAGCTTAAGCCA GAGTATGGCGGCGGCTACTTGGTATTTGCTCCGCATCGCGAGCATGTGTA CGTCAACCATGAAATGGAAAAGAGTAGCGGCTGTTACTTTGCCCCGGCTG ATCGCTCATTGTTGATTATGAACGTGTTGCAGTCCAAGGAGCATTGGGGT TGTGGCTTGAATATTGAGAGACTCCTGTTTGAAAAAAAAGTTGAACAGGC GTTTGCGCTGCATTCTATGGTGGAAAAACGCCGTCTTGTGAAGGAGGTGG TTTGGAGACAGTGGTGGAACCCAATTCGACGGCCTCCGTTTCAAGAGCTT AAGGACTATCTTGGAGCGCGTGTGACGTTTTATTTTGTGTTTGTGAGCTT TTATGCGAGACGGTTACTTCCGCTTGCACTGTTGTCCATTCCTGTGTTTG TCATTTATCGCACGGTGAAAAACGCCGGAGTACTGGTGATTATACGATGG GTGTTTTCAATTGGATTGGTTCTATGGACCACATACTTTTTGGAGAATTG GAAGCGGAGAACTGCGATGGTGAACACTAAATGGGGCCTGCACGACTACC AGGAAGACACATTGGACGATACGCGAGTGCAGTTCGAGGGAGAGCAGCGG TACGGATTCTACAGCAAGGGCGGTTTCGTAGCGCTAGACGACCTGGCAAT GCACGGAGACTATTGCCTGCCGAgcggaaatagcgagcaaagctgcagtg gcgacagcagcggcagtggcggcggcggcagcggcggcagcaaacagacg gACAGGCAGAATATGGTGGAGCGACAGGGGAGCAAAGTGCTGCTACCTCG CAATCCGTACCAAGACCCGCGTAAGCAGCGAAATGCAATGGCAGTTTCTG CGGGAGTGACGGCGGTGTTCGTGATCATTGTTGGGGCGTTGACGTTCCTG TTGTTGTGGTTCCGAAATGAGATTGTGGAGTGGAGCAGAGTGCATATTAC GGATGGATTTGCGGAAGGTGTGCCTGGTGTGCTGAACGGAGTGCTGATCT CTGTATTTGACTCGATATGGCGGCCGGTGTCGATGTGGCTGACGCGGCGG GAGAATCATCGGACGAACCAGCAATTCGAGAACAGCCTGATCTACAAGCG GTTCGCGTTCATGTTTGTGTCAAACTACATTTCGTTATTCTACATTGCGT TTGTGCGAAAGTACCTGGAGAAGACGTGCGCGGTGGGCAAGGTGGGGAGC GATTGCATGCGCGAGCTGGAGAACCAGATGCTGTCGCTGGTGCTGACAAA GGCGACGATCGGGCAGGTGATGGAAATCGGAGTGCCGTGGGTGATGAGCA CGGTggggcaggtgcgggcgcgggcgcgggcgcgaaaagagcgacagcgg ggcagacgcggcgggggtgtgggcgGGACGGATTACAACCGCTATGTAGC GGAGAGCAAGCTGAGCAAGTACCACTCGACGATGGAAGACTACAGCGAAC TGGTGATGCAATTCGGGTTCCTGGCGCTGTTCGGGGTGGCGTTCCCGCTG GCCAGCGTGGTGAACATGGTGAACAACACGTTGGAGGTGCGCACGGACGC ATACAAGCTGCTGCAGCTGTCGCAACGCGTGGACGCAGACGACGCGGCGG ACATCGGCGCATGGTACGCCATCCTTCAACTGCTCAACGTACTGTCGGTG TGGAGCAACGCGGCGTTGCTCATCTTCACGTCCGAGTCGCTGGAATTGTT GCTCCCGCCCGACGCCGAGAGCTCCCGCGCGTGGCTGCTGCGCTTGGCGG CCTTCCTGGCGCTGGAGCACGTGCTGCTGGGCGTCAAGGCGGCCGGCGCT GCGCTGGTGCGCGACGTGCCCAACGCGGCGCGCCGCACGCTAGCGCGTCA GGCTTTTGACATTGCGCGCCACTTCGACGTCGCCTGGACCGATACCTTCC GCGGCGCCCCGCTGCTGCATCTGCCTCCTGACCAGCTGCGCGTCGCGCAG CGCCATGCACACCTCTTCGACGTGGACCCTATGCACTCCCTCGACTTTGT TTCACCCGTGTCCTCCGTGGCTCCCGTGGCTCCCGTGGCTCCCGTGTCCT CCGTGGAACACGTCGCTCGAGCGTAA back to top
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