Gchil8193.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil8193.t1
Unique Name	Gchil8193.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	666

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:661664..663661 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	691883.XP_009493537.1
Preferred name	KRI1
PFAMs	Kri1,Kri1_C
Max annot lvl	33154\|Opisthokonta
KEGG ko	ko:K14786
GOs	GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0002376,GO:0002520,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030097,GO:0030490,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0060216,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1990904
Evalue	1.02e-49
EggNOG OGs	KOG2409@1\|root,KOG2409@2759\|Eukaryota,38D56@33154\|Opisthokonta
Description	KRI1 homolog
COG category	J
BRITE	ko00000,ko03009

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8193	Gchil8193	Gracilaria chilensis NLEC103_M9 male	gene	tig00004384_pilon 661664..663661 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil8193.t1.start1	Gchil8193.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004384_pilon 661664..661666 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil8193.t1.CDS1	Gchil8193.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004384_pilon 661664..663661 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil8193.t1.exon1	Gchil8193.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004384_pilon 661664..663661 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil8193.t1.stop1	Gchil8193.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004384_pilon 663659..663661 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil8193.t1	Gchil8193.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004384_pilon 661664..663661 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004384_pilon:661664..663661+
coding sequence from alignment at tig00004384_pilon:661664..663661+

mRNA sequence

>Gchil8193.t1 ID=Gchil8193.t1|Name=Gchil8193.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=666bp
MPRKPRKNASVDPESNLKESIETEKDKGILPINKRFADKYEASKRREFLN
NSSVALLQSSDDLSSSSEEEDELGELLTKGIDKRFKETIEAIRRKDPRIY
DKSTKFFESQSDGEQDDDKSQRSYHSEDEPVAGWDSIAEVAKRDTTKLTL
KDYVRENLLKDGRLSDNDTDTENDIEEGKHMNGTFTQEKAFVGSIESRNA
RPNSHLKVGSDLLGSESEGEEKEEEDENFFTKKKKNINEIEKEEQEFDKF
LKKQSHKRAQQTGDELLLHSYLEKENPDEKERFLRDFVMNNGWLDKNAVD
APGASDYKIEIDLPGEVDEKIEEDENFEEKNDEFEAKYNFRFEDPDGSNV
VSYARKISDSMRRPDDRRKKAREARRLRKQLEKAAKIEDIKHLKNLKKKE
IQARLLAIQEAAGDELDTTGFDLEGDFDPEEFNKQMERNFGDGYYSREDT
HMKGQEKLKERGLQETYAITARSNVPEDVQDDVGRLIDEYYNLNYEDIVG
GVPVRFKYKKVAPESFNMTPEHILTTDDRELNSLVSLKYLAPYRSEREVK
KKAWKAASTMRKKRISDQGRRYGEPASDIDVGKNERANRDSSKKKRRRRG
ESAEDIDAKQAEEDDGWGDVIVNPLEATGNEESKLDEADRANNMKSKRKR
KKRKQRGCVPVTKDT*

spliced messenger RNA

>Gchil8193.t1 ID=Gchil8193.t1|Name=Gchil8193.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1998bp|location=Sequence derived from alignment at tig00004384_pilon:661664..663661+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTCGCAAGCCCCGCAAGAACGCTTCCGTTGATCCGGAATCAAATCT
GAAAGAATCTATAGAAACGGAAAAGGACAAAGGAATCCTTCCGATTAACA
AGAGATTTGCTGATAAGTATGAGGCATCAAAGCGTCGTGAGTTTTTGAAC
AATTCGTCTGTTGCTTTGCTTCAATCTTCTGATGATTTGTCGTCATCTTC
AGAAGAAGAAGATGAGCTTGGCGAACTTCTCACGAAAGGAATCGACAAGC
GATTTAAGGAAACTATAGAAGCTATACGAAGAAAGGATCCGCGTATCTAC
GACAAGAGCACAAAGTTTTTCGAAAGTCAGAGCGATGGCGAACAGGATGA
TGATAAATCCCAACGCTCGTATCACAGTGAGGATGAACCCGTTGCTGGGT
GGGATTCCATAGCAGAAGTTGCAAAAAGAGACACGACTAAGCTTACCCTC
AAGGATTATGTAAGAGAGAATTTATTAAAGGACGGGCGGTTATCAGACAA
CGATACCGACACGGAAAACGATATCGAAGAAGGAAAGCATATGAATGGTA
CATTCACTCAAGAAAAAGCCTTTGTTGGAAGCATAGAATCGCGAAATGCC
AGGCCAAATAGTCACCTGAAAGTGGGCTCTGATTTGCTAGGGAGTGAATC
AGAAGGAGAGGAGAAAGAAGAGGAGGATGAAAATTTCTTTACAAAGAAGA
AGAAAAACATCAATGAGATTGAGAAGGAAGAACAGGAGTTTGATAAGTTC
TTGAAAAAACAAAGCCACAAGCGTGCTCAGCAAACGGGGGACGAATTGCT
TCTCCATTCATATCTTGAAAAGGAGAATCCAGACGAGAAAGAAAGATTCC
TTCGCGATTTTGTTATGAACAACGGTTGGCTGGATAAGAACGCTGTAGAT
GCGCCCGGAGCAAGCGACTATAAGATTGAAATTGACCTTCCCGGTGAAGT
GGACGAAAAGATCGAGGAGGATGAAAATTTCGAGGAAAAGAACGACGAGT
TTGAAGCCAAATATAACTTCCGTTTTGAAGACCCTGATGGTTCAAATGTT
GTATCGTATGCGCGAAAGATTTCAGACTCAATGCGTCGTCCCGACGACCG
GCGAAAGAAGGCTAGAGAGGCTCGGAGACTACGAAAACAACTAGAGAAGG
CGGCGAAAATTGAAGACATCAAACATTTAAAAAATCTCAAGAAGAAAGAG
ATTCAGGCTCGGCTTTTGGCGATACAAGAAGCTGCTGGAGATGAATTGGA
TACAACCGGGTTTGATTTAGAGGGAGACTTTGATCCTGAAGAATTCAACA
AGCAAATGGAGAGAAATTTTGGGGATGGCTATTATTCTCGAGAAGATACA
CACATGAAGGGACAGGAAAAATTGAAAGAGAGAGGGCTTCAGGAAACGTA
CGCTATCACAGCTCGCAGCAATGTACCCGAGGATGTTCAGGACGACGTAG
GTCGTCTGATTGATGAGTACTATAATCTTAACTATGAAGATATTGTGGGA
GGGGTTCCCGTGCGCTTTAAGTACAAAAAGGTGGCACCAGAATCGTTCAA
TATGACGCCCGAACATATACTGACGACTGACGACAGAGAACTAAACTCGC
TCGTTTCGTTGAAGTATCTTGCCCCGTACAGGTCAGAACGAGAGGTCAAG
AAGAAGGCTTGGAAAGCTGCATCCACTATGAGAAAGAAGCGAATCTCAGA
CCAAGGAAGGAGATACGGAGAACCCGCAAGCGACATTGATGTGGGAAAAA
ATGAAAGGGCAAACCGAGATAGTTCGAAGAAAAAGAGACGAAGGAGGGGA
GAGAGTGCGGAAGACATCGACGCGAAGCAAGCTGAGGAAGATGATGGATG
GGGGGATGTTATTGTCAACCCCCTGGAAGCGACTGGAAATGAAGAAAGCA
AATTGGACGAAGCTGATCGCGCGAATAACATGAAATCGAAACGAAAACGC
AAGAAGAGAAAGCAAAGAGGATGTGTCCCTGTTACGAAGGATACATGA

protein sequence of Gchil8193.t1

>Gchil8193.t1 ID=Gchil8193.t1|Name=Gchil8193.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=666bp
MPRKPRKNASVDPESNLKESIETEKDKGILPINKRFADKYEASKRREFLN
NSSVALLQSSDDLSSSSEEEDELGELLTKGIDKRFKETIEAIRRKDPRIY
DKSTKFFESQSDGEQDDDKSQRSYHSEDEPVAGWDSIAEVAKRDTTKLTL
KDYVRENLLKDGRLSDNDTDTENDIEEGKHMNGTFTQEKAFVGSIESRNA
RPNSHLKVGSDLLGSESEGEEKEEEDENFFTKKKKNINEIEKEEQEFDKF
LKKQSHKRAQQTGDELLLHSYLEKENPDEKERFLRDFVMNNGWLDKNAVD
APGASDYKIEIDLPGEVDEKIEEDENFEEKNDEFEAKYNFRFEDPDGSNV
VSYARKISDSMRRPDDRRKKAREARRLRKQLEKAAKIEDIKHLKNLKKKE
IQARLLAIQEAAGDELDTTGFDLEGDFDPEEFNKQMERNFGDGYYSREDT
HMKGQEKLKERGLQETYAITARSNVPEDVQDDVGRLIDEYYNLNYEDIVG
GVPVRFKYKKVAPESFNMTPEHILTTDDRELNSLVSLKYLAPYRSEREVK
KKAWKAASTMRKKRISDQGRRYGEPASDIDVGKNERANRDSSKKKRRRRG
ESAEDIDAKQAEEDDGWGDVIVNPLEATGNEESKLDEADRANNMKSKRKR
KKRKQRGCVPVTKDT*

mRNA from alignment at tig00004384_pilon:661664..663661+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil8193.t1 ID=Gchil8193.t1|Name=Gchil8193.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1998bp|location=Sequence derived from alignment at tig00004384_pilon:661664..663661+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCTCGCAAGCCCCGCAAGAACGCTTCCGTTGATCCGGAATCAAATCT
GAAAGAATCTATAGAAACGGAAAAGGACAAAGGAATCCTTCCGATTAACA
AGAGATTTGCTGATAAGTATGAGGCATCAAAGCGTCGTGAGTTTTTGAAC
AATTCGTCTGTTGCTTTGCTTCAATCTTCTGATGATTTGTCGTCATCTTC
AGAAGAAGAAGATGAGCTTGGCGAACTTCTCACGAAAGGAATCGACAAGC
GATTTAAGGAAACTATAGAAGCTATACGAAGAAAGGATCCGCGTATCTAC
GACAAGAGCACAAAGTTTTTCGAAAGTCAGAGCGATGGCGAACAGGATGA
TGATAAATCCCAACGCTCGTATCACAGTGAGGATGAACCCGTTGCTGGGT
GGGATTCCATAGCAGAAGTTGCAAAAAGAGACACGACTAAGCTTACCCTC
AAGGATTATGTAAGAGAGAATTTATTAAAGGACGGGCGGTTATCAGACAA
CGATACCGACACGGAAAACGATATCGAAGAAGGAAAGCATATGAATGGTA
CATTCACTCAAGAAAAAGCCTTTGTTGGAAGCATAGAATCGCGAAATGCC
AGGCCAAATAGTCACCTGAAAGTGGGCTCTGATTTGCTAGGGAGTGAATC
AGAAGGAGAGGAGAAAGAAGAGGAGGATGAAAATTTCTTTACAAAGAAGA
AGAAAAACATCAATGAGATTGAGAAGGAAGAACAGGAGTTTGATAAGTTC
TTGAAAAAACAAAGCCACAAGCGTGCTCAGCAAACGGGGGACGAATTGCT
TCTCCATTCATATCTTGAAAAGGAGAATCCAGACGAGAAAGAAAGATTCC
TTCGCGATTTTGTTATGAACAACGGTTGGCTGGATAAGAACGCTGTAGAT
GCGCCCGGAGCAAGCGACTATAAGATTGAAATTGACCTTCCCGGTGAAGT
GGACGAAAAGATCGAGGAGGATGAAAATTTCGAGGAAAAGAACGACGAGT
TTGAAGCCAAATATAACTTCCGTTTTGAAGACCCTGATGGTTCAAATGTT
GTATCGTATGCGCGAAAGATTTCAGACTCAATGCGTCGTCCCGACGACCG
GCGAAAGAAGGCTAGAGAGGCTCGGAGACTACGAAAACAACTAGAGAAGG
CGGCGAAAATTGAAGACATCAAACATTTAAAAAATCTCAAGAAGAAAGAG
ATTCAGGCTCGGCTTTTGGCGATACAAGAAGCTGCTGGAGATGAATTGGA
TACAACCGGGTTTGATTTAGAGGGAGACTTTGATCCTGAAGAATTCAACA
AGCAAATGGAGAGAAATTTTGGGGATGGCTATTATTCTCGAGAAGATACA
CACATGAAGGGACAGGAAAAATTGAAAGAGAGAGGGCTTCAGGAAACGTA
CGCTATCACAGCTCGCAGCAATGTACCCGAGGATGTTCAGGACGACGTAG
GTCGTCTGATTGATGAGTACTATAATCTTAACTATGAAGATATTGTGGGA
GGGGTTCCCGTGCGCTTTAAGTACAAAAAGGTGGCACCAGAATCGTTCAA
TATGACGCCCGAACATATACTGACGACTGACGACAGAGAACTAAACTCGC
TCGTTTCGTTGAAGTATCTTGCCCCGTACAGGTCAGAACGAGAGGTCAAG
AAGAAGGCTTGGAAAGCTGCATCCACTATGAGAAAGAAGCGAATCTCAGA
CCAAGGAAGGAGATACGGAGAACCCGCAAGCGACATTGATGTGGGAAAAA
ATGAAAGGGCAAACCGAGATAGTTCGAAGAAAAAGAGACGAAGGAGGGGA
GAGAGTGCGGAAGACATCGACGCGAAGCAAGCTGAGGAAGATGATGGATG
GGGGGATGTTATTGTCAACCCCCTGGAAGCGACTGGAAATGAAGAAAGCA
AATTGGACGAAGCTGATCGCGCGAATAACATGAAATCGAAACGAAAACGC
AAGAAGAGAAAGCAAAGAGGATGTGTCCCTGTTACGAAGGATACATGA

Coding sequence (CDS) from alignment at tig00004384_pilon:661664..663661+

>Gchil8193.t1 ID=Gchil8193.t1|Name=Gchil8193.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1998bp|location=Sequence derived from alignment at tig00004384_pilon:661664..663661+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCTCGCAAGCCCCGCAAGAACGCTTCCGTTGATCCGGAATCAAATCT
GAAAGAATCTATAGAAACGGAAAAGGACAAAGGAATCCTTCCGATTAACA
AGAGATTTGCTGATAAGTATGAGGCATCAAAGCGTCGTGAGTTTTTGAAC
AATTCGTCTGTTGCTTTGCTTCAATCTTCTGATGATTTGTCGTCATCTTC
AGAAGAAGAAGATGAGCTTGGCGAACTTCTCACGAAAGGAATCGACAAGC
GATTTAAGGAAACTATAGAAGCTATACGAAGAAAGGATCCGCGTATCTAC
GACAAGAGCACAAAGTTTTTCGAAAGTCAGAGCGATGGCGAACAGGATGA
TGATAAATCCCAACGCTCGTATCACAGTGAGGATGAACCCGTTGCTGGGT
GGGATTCCATAGCAGAAGTTGCAAAAAGAGACACGACTAAGCTTACCCTC
AAGGATTATGTAAGAGAGAATTTATTAAAGGACGGGCGGTTATCAGACAA
CGATACCGACACGGAAAACGATATCGAAGAAGGAAAGCATATGAATGGTA
CATTCACTCAAGAAAAAGCCTTTGTTGGAAGCATAGAATCGCGAAATGCC
AGGCCAAATAGTCACCTGAAAGTGGGCTCTGATTTGCTAGGGAGTGAATC
AGAAGGAGAGGAGAAAGAAGAGGAGGATGAAAATTTCTTTACAAAGAAGA
AGAAAAACATCAATGAGATTGAGAAGGAAGAACAGGAGTTTGATAAGTTC
TTGAAAAAACAAAGCCACAAGCGTGCTCAGCAAACGGGGGACGAATTGCT
TCTCCATTCATATCTTGAAAAGGAGAATCCAGACGAGAAAGAAAGATTCC
TTCGCGATTTTGTTATGAACAACGGTTGGCTGGATAAGAACGCTGTAGAT
GCGCCCGGAGCAAGCGACTATAAGATTGAAATTGACCTTCCCGGTGAAGT
GGACGAAAAGATCGAGGAGGATGAAAATTTCGAGGAAAAGAACGACGAGT
TTGAAGCCAAATATAACTTCCGTTTTGAAGACCCTGATGGTTCAAATGTT
GTATCGTATGCGCGAAAGATTTCAGACTCAATGCGTCGTCCCGACGACCG
GCGAAAGAAGGCTAGAGAGGCTCGGAGACTACGAAAACAACTAGAGAAGG
CGGCGAAAATTGAAGACATCAAACATTTAAAAAATCTCAAGAAGAAAGAG
ATTCAGGCTCGGCTTTTGGCGATACAAGAAGCTGCTGGAGATGAATTGGA
TACAACCGGGTTTGATTTAGAGGGAGACTTTGATCCTGAAGAATTCAACA
AGCAAATGGAGAGAAATTTTGGGGATGGCTATTATTCTCGAGAAGATACA
CACATGAAGGGACAGGAAAAATTGAAAGAGAGAGGGCTTCAGGAAACGTA
CGCTATCACAGCTCGCAGCAATGTACCCGAGGATGTTCAGGACGACGTAG
GTCGTCTGATTGATGAGTACTATAATCTTAACTATGAAGATATTGTGGGA
GGGGTTCCCGTGCGCTTTAAGTACAAAAAGGTGGCACCAGAATCGTTCAA
TATGACGCCCGAACATATACTGACGACTGACGACAGAGAACTAAACTCGC
TCGTTTCGTTGAAGTATCTTGCCCCGTACAGGTCAGAACGAGAGGTCAAG
AAGAAGGCTTGGAAAGCTGCATCCACTATGAGAAAGAAGCGAATCTCAGA
CCAAGGAAGGAGATACGGAGAACCCGCAAGCGACATTGATGTGGGAAAAA
ATGAAAGGGCAAACCGAGATAGTTCGAAGAAAAAGAGACGAAGGAGGGGA
GAGAGTGCGGAAGACATCGACGCGAAGCAAGCTGAGGAAGATGATGGATG
GGGGGATGTTATTGTCAACCCCCTGGAAGCGACTGGAAATGAAGAAAGCA
AATTGGACGAAGCTGATCGCGCGAATAACATGAAATCGAAACGAAAACGC
AAGAAGAGAAAGCAAAGAGGATGTGTCCCTGTTACGAAGGATACATGA