Gchil7775.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7775.t1
Unique NameGchil7775.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length467
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:1490907..1492307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7775Gchil7775Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 1490907..1492307 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7775.t1.stop1Gchil7775.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 1490907..1490909 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7775.t1.CDS1Gchil7775.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 1490907..1492307 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7775.t1.exon1Gchil7775.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 1490907..1492307 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7775.t1.start1Gchil7775.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 1492305..1492307 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7775.t1Gchil7775.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 1490907..1492307 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7775.t1 ID=Gchil7775.t1|Name=Gchil7775.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=467bp
MSLSPAVLGAIFFLFTVSAQLSGPTRPHMPTIFPGRPEAPTFGRPIGLQN
APGTPLISSRRETASERLQRLRGEIPEPAPGEEPNIEELYNPMQDAKCFN
AEYDTSVPMSKISSLFSDYVNIFEWGFNMPRSSPIFSFSEHGVTNNRFPG
MCLRMAFHDNSINPAYGEYASYVSGLIDGNGNWTGPKRFLETSGGDASVL
TCRIERLHPNQNYDQTASRILFAFQTSDVPGLRGQSLMEKYQMSYADALH
NCALAAVSWLNPGEGGSSRNQTRFGRKDACFFSDDAVFATDSLSLNRNNP
LCGPTELLPSVTFSARQSNRWFTSRGLPERQWLSYMGTHTTFDNFGRTET
LRQMPVPGDDYFTDYVGVPVHKPDVKDAATDPENPGCDWIVNGLERHWPM
SQADCALGIDVVSDGPDLQELETVMDRYINAPASWIRNDLVCAMTLLGGR
SNERCDGVDPLFGSFY*
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spliced messenger RNA

>Gchil7775.t1 ID=Gchil7775.t1|Name=Gchil7775.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1401bp|location=Sequence derived from alignment at tig00025321_pilon:1490907..1492307- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTTTGTCACCAGCAGTTTTGGGTGCTATATTTTTTCTGTTCACAGT
CAGTGCACAGCTTTCGGGACCTACACGGCCTCATATGCCTACCATTTTCC
CAGGCAGGCCAGAAGCACCTACATTTGGCAGGCCCATAGGCTTGCAGAAT
GCTCCAGGAACCCCCCTCATATCCTCGAGAAGAGAGACCGCAAGTGAACG
TCTGCAGCGACTCAGGGGTGAAATCCCAGAGCCCGCGCCCGGTGAGGAAC
CGAACATCGAAGAACTCTATAACCCAATGCAAGATGCAAAGTGCTTCAAT
GCCGAGTACGACACTTCCGTGCCGATGTCGAAAATATCATCCCTGTTCTC
TGACTACGTCAACATCTTCGAATGGGGTTTCAACATGCCTCGCAGTTCCC
CTATATTCTCGTTTTCTGAACATGGCGTCACCAACAACAGATTTCCTGGC
ATGTGCCTCAGGATGGCCTTCCATGACAACTCCATAAATCCTGCATACGG
TGAGTATGCGTCGTATGTTTCTGGTCTCATCGATGGAAACGGCAATTGGA
CAGGCCCGAAAAGGTTCTTAGAAACTTCTGGTGGCGACGCATCCGTCTTG
ACCTGTCGTATCGAGCGACTTCATCCGAATCAGAACTACGACCAAACAGC
ATCCCGAATTCTGTTTGCTTTCCAGACAAGTGACGTTCCCGGACTAAGAG
GGCAGTCTCTCATGGAAAAATATCAGATGTCTTACGCGGACGCACTCCAC
AACTGCGCGCTTGCAGCTGTGTCTTGGTTGAATCCAGGAGAAGGAGGTAG
CAGCAGGAATCAAACACGTTTTGGCAGAAAAGACGCTTGCTTTTTTTCCG
ATGATGCTGTTTTCGCAACAGATTCTTTAAGTTTGAATAGAAACAATCCC
TTGTGTGGGCCGACTGAGCTCTTACCTTCTGTCACATTCAGTGCAAGGCA
ATCTAATAGGTGGTTTACATCTCGCGGATTACCTGAACGTCAGTGGTTGT
CTTACATGGGTACTCACACTACTTTTGATAATTTTGGTAGGACTGAGACC
TTGCGCCAGATGCCAGTGCCTGGGGATGACTACTTCACTGACTACGTGGG
TGTCCCAGTTCACAAACCGGACGTGAAAGACGCTGCAACTGATCCTGAGA
ATCCCGGATGCGATTGGATTGTAAATGGACTTGAACGACATTGGCCAATG
TCACAGGCTGATTGTGCACTTGGGATTGATGTCGTTTCCGACGGTCCGGA
CCTACAAGAATTGGAAACCGTGATGGACAGATACATCAATGCCCCAGCTT
CCTGGATTCGGAACGACCTGGTATGTGCTATGACTTTGCTGGGTGGTCGT
TCCAACGAACGATGTGACGGTGTTGACCCGTTATTCGGGTCCTTCTATTA
A
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protein sequence of Gchil7775.t1

>Gchil7775.t1 ID=Gchil7775.t1|Name=Gchil7775.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=467bp
MSLSPAVLGAIFFLFTVSAQLSGPTRPHMPTIFPGRPEAPTFGRPIGLQN
APGTPLISSRRETASERLQRLRGEIPEPAPGEEPNIEELYNPMQDAKCFN
AEYDTSVPMSKISSLFSDYVNIFEWGFNMPRSSPIFSFSEHGVTNNRFPG
MCLRMAFHDNSINPAYGEYASYVSGLIDGNGNWTGPKRFLETSGGDASVL
TCRIERLHPNQNYDQTASRILFAFQTSDVPGLRGQSLMEKYQMSYADALH
NCALAAVSWLNPGEGGSSRNQTRFGRKDACFFSDDAVFATDSLSLNRNNP
LCGPTELLPSVTFSARQSNRWFTSRGLPERQWLSYMGTHTTFDNFGRTET
LRQMPVPGDDYFTDYVGVPVHKPDVKDAATDPENPGCDWIVNGLERHWPM
SQADCALGIDVVSDGPDLQELETVMDRYINAPASWIRNDLVCAMTLLGGR
SNERCDGVDPLFGSFY*
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mRNA from alignment at tig00025321_pilon:1490907..1492307-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7775.t1 ID=Gchil7775.t1|Name=Gchil7775.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1401bp|location=Sequence derived from alignment at tig00025321_pilon:1490907..1492307- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTTGTCACCAGCAGTTTTGGGTGCTATATTTTTTCTGTTCACAGT
CAGTGCACAGCTTTCGGGACCTACACGGCCTCATATGCCTACCATTTTCC
CAGGCAGGCCAGAAGCACCTACATTTGGCAGGCCCATAGGCTTGCAGAAT
GCTCCAGGAACCCCCCTCATATCCTCGAGAAGAGAGACCGCAAGTGAACG
TCTGCAGCGACTCAGGGGTGAAATCCCAGAGCCCGCGCCCGGTGAGGAAC
CGAACATCGAAGAACTCTATAACCCAATGCAAGATGCAAAGTGCTTCAAT
GCCGAGTACGACACTTCCGTGCCGATGTCGAAAATATCATCCCTGTTCTC
TGACTACGTCAACATCTTCGAATGGGGTTTCAACATGCCTCGCAGTTCCC
CTATATTCTCGTTTTCTGAACATGGCGTCACCAACAACAGATTTCCTGGC
ATGTGCCTCAGGATGGCCTTCCATGACAACTCCATAAATCCTGCATACGG
TGAGTATGCGTCGTATGTTTCTGGTCTCATCGATGGAAACGGCAATTGGA
CAGGCCCGAAAAGGTTCTTAGAAACTTCTGGTGGCGACGCATCCGTCTTG
ACCTGTCGTATCGAGCGACTTCATCCGAATCAGAACTACGACCAAACAGC
ATCCCGAATTCTGTTTGCTTTCCAGACAAGTGACGTTCCCGGACTAAGAG
GGCAGTCTCTCATGGAAAAATATCAGATGTCTTACGCGGACGCACTCCAC
AACTGCGCGCTTGCAGCTGTGTCTTGGTTGAATCCAGGAGAAGGAGGTAG
CAGCAGGAATCAAACACGTTTTGGCAGAAAAGACGCTTGCTTTTTTTCCG
ATGATGCTGTTTTCGCAACAGATTCTTTAAGTTTGAATAGAAACAATCCC
TTGTGTGGGCCGACTGAGCTCTTACCTTCTGTCACATTCAGTGCAAGGCA
ATCTAATAGGTGGTTTACATCTCGCGGATTACCTGAACGTCAGTGGTTGT
CTTACATGGGTACTCACACTACTTTTGATAATTTTGGTAGGACTGAGACC
TTGCGCCAGATGCCAGTGCCTGGGGATGACTACTTCACTGACTACGTGGG
TGTCCCAGTTCACAAACCGGACGTGAAAGACGCTGCAACTGATCCTGAGA
ATCCCGGATGCGATTGGATTGTAAATGGACTTGAACGACATTGGCCAATG
TCACAGGCTGATTGTGCACTTGGGATTGATGTCGTTTCCGACGGTCCGGA
CCTACAAGAATTGGAAACCGTGATGGACAGATACATCAATGCCCCAGCTT
CCTGGATTCGGAACGACCTGGTATGTGCTATGACTTTGCTGGGTGGTCGT
TCCAACGAACGATGTGACGGTGTTGACCCGTTATTCGGGTCCTTCTATTA
A
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Coding sequence (CDS) from alignment at tig00025321_pilon:1490907..1492307-

>Gchil7775.t1 ID=Gchil7775.t1|Name=Gchil7775.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1401bp|location=Sequence derived from alignment at tig00025321_pilon:1490907..1492307- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTTGTCACCAGCAGTTTTGGGTGCTATATTTTTTCTGTTCACAGT
CAGTGCACAGCTTTCGGGACCTACACGGCCTCATATGCCTACCATTTTCC
CAGGCAGGCCAGAAGCACCTACATTTGGCAGGCCCATAGGCTTGCAGAAT
GCTCCAGGAACCCCCCTCATATCCTCGAGAAGAGAGACCGCAAGTGAACG
TCTGCAGCGACTCAGGGGTGAAATCCCAGAGCCCGCGCCCGGTGAGGAAC
CGAACATCGAAGAACTCTATAACCCAATGCAAGATGCAAAGTGCTTCAAT
GCCGAGTACGACACTTCCGTGCCGATGTCGAAAATATCATCCCTGTTCTC
TGACTACGTCAACATCTTCGAATGGGGTTTCAACATGCCTCGCAGTTCCC
CTATATTCTCGTTTTCTGAACATGGCGTCACCAACAACAGATTTCCTGGC
ATGTGCCTCAGGATGGCCTTCCATGACAACTCCATAAATCCTGCATACGG
TGAGTATGCGTCGTATGTTTCTGGTCTCATCGATGGAAACGGCAATTGGA
CAGGCCCGAAAAGGTTCTTAGAAACTTCTGGTGGCGACGCATCCGTCTTG
ACCTGTCGTATCGAGCGACTTCATCCGAATCAGAACTACGACCAAACAGC
ATCCCGAATTCTGTTTGCTTTCCAGACAAGTGACGTTCCCGGACTAAGAG
GGCAGTCTCTCATGGAAAAATATCAGATGTCTTACGCGGACGCACTCCAC
AACTGCGCGCTTGCAGCTGTGTCTTGGTTGAATCCAGGAGAAGGAGGTAG
CAGCAGGAATCAAACACGTTTTGGCAGAAAAGACGCTTGCTTTTTTTCCG
ATGATGCTGTTTTCGCAACAGATTCTTTAAGTTTGAATAGAAACAATCCC
TTGTGTGGGCCGACTGAGCTCTTACCTTCTGTCACATTCAGTGCAAGGCA
ATCTAATAGGTGGTTTACATCTCGCGGATTACCTGAACGTCAGTGGTTGT
CTTACATGGGTACTCACACTACTTTTGATAATTTTGGTAGGACTGAGACC
TTGCGCCAGATGCCAGTGCCTGGGGATGACTACTTCACTGACTACGTGGG
TGTCCCAGTTCACAAACCGGACGTGAAAGACGCTGCAACTGATCCTGAGA
ATCCCGGATGCGATTGGATTGTAAATGGACTTGAACGACATTGGCCAATG
TCACAGGCTGATTGTGCACTTGGGATTGATGTCGTTTCCGACGGTCCGGA
CCTACAAGAATTGGAAACCGTGATGGACAGATACATCAATGCCCCAGCTT
CCTGGATTCGGAACGACCTGGTATGTGCTATGACTTTGCTGGGTGGTCGT
TCCAACGAACGATGTGACGGTGTTGACCCGTTATTCGGGTCCTTCTATTA
A
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