Gchil7771.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7771.t1
Unique NameGchil7771.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length299
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:1409290..1410186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog5691.AAZ11194
PFAMsPkinase
Max annot lvl2759|Eukaryota
KEGG koko:K02218,ko:K14758
KEGG Pathwayko03008,ko04011,ko04392,map03008,map04011,map04392
GOsGO:0000003,GO:0000018,GO:0000166,GO:0000228,GO:0000280,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004713,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006282,GO:0006355,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0008144,GO:0008150,GO:0008152,GO:0008360,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010498,GO:0010520,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010620,GO:0010629,GO:0010638,GO:0010845,GO:0010894,GO:0010895,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018108,GO:0018193,GO:0018209,GO:0018212,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030163,GO:0030554,GO:0030999,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032443,GO:0032553,GO:0032555,GO:0032559,GO:0033043,GO:0035639,GO:0036094,GO:0036211,GO:0036369,GO:0040020,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045132,GO:0045143,GO:0045787,GO:0045833,GO:0045836,GO:0045892,GO:0045911,GO:0045934,GO:0045935,GO:0045939,GO:0046890,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0051052,GO:0051054,GO:0051055,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051445,GO:0051446,GO:0051603,GO:0051726,GO:0051755,GO:0051757,GO:0051783,GO:0051785,GO:0060255,GO:0060631,GO:0060903,GO:0061982,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0097159,GO:0097367,GO:0098657,GO:0098813,GO:0106118,GO:0106119,GO:0140013,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1902930,GO:1902931,GO:1903046,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2000241,GO:2000243,GO:2001020,GO:2001141
Evalue5.03e-47
EggNOG OGsKOG1164@1|root,KOG1164@2759|Eukaryota,3XTQH@5653|Kinetoplastida
EC2.7.11.1
DescriptionBelongs to the protein kinase superfamily
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko03009,ko03016
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7771Gchil7771Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 1409290..1410186 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7771.t1.start1Gchil7771.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 1409290..1409292 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7771.t1.CDS1Gchil7771.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 1409290..1410186 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7771.t1.exon1Gchil7771.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 1409290..1410186 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7771.t1.stop1Gchil7771.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 1410184..1410186 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7771.t1Gchil7771.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 1409290..1410186 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7771.t1 ID=Gchil7771.t1|Name=Gchil7771.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=299bp
MPFARNTLIANEYKVIRKVGDGGEGCVYHVKGTNGAHYAMKAARGHGFLR
KEYEMYWRLGCVGSHTEFFPTIYSYTIHGEHDVLIMSILDESLESLKDNN
RGRLSMRNVLLIGVELIKIIQQVHSKGILHLDLKPANIMLRNVGNRRKKV
NIIDFGCARLFIDPRSGRHIPAASHVSFDGSPVFAPKRGHLSRSTSRRDD
LESIGYVLVHLAKGQLPWEDIAGQTWEEEFERMGRVKMEMSLEDVCVGTA
GIHEFLQEVSSTVFRQKPNYCSLIQKLEFAIVSISGASGLSSSWLEKC*
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spliced messenger RNA

>Gchil7771.t1 ID=Gchil7771.t1|Name=Gchil7771.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=897bp|location=Sequence derived from alignment at tig00025321_pilon:1409290..1410186+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTTTTGCAAGGAATACACTCATCGCCAATGAGTACAAAGTGATTCG
AAAAGTGGGCGATGGTGGGGAGGGATGTGTGTATCATGTAAAAGGTACAA
ATGGGGCTCACTATGCTATGAAGGCGGCGAGGGGCCACGGATTTCTGAGG
AAAGAATATGAAATGTACTGGCGGCTTGGGTGCGTTGGAAGTCACACTGA
GTTTTTCCCTACGATCTACTCGTACACAATACACGGCGAACACGACGTGC
TGATCATGAGCATCCTCGACGAGTCGTTGGAAAGTTTGAAGGACAATAAT
CGTGGAAGGCTTTCCATGAGAAACGTTCTGTTGATCGGGGTTGAGCTCAT
TAAAATAATACAACAAGTTCACTCCAAAGGTATATTGCATCTCGACCTGA
AGCCTGCGAATATTATGTTGCGAAACGTGGGAAACCGGAGAAAAAAAGTG
AATATTATCGACTTTGGCTGTGCGCGCCTATTTATTGATCCGCGATCGGG
TCGTCACATCCCGGCCGCATCGCACGTCTCTTTCGATGGAAGCCCCGTGT
TTGCGCCCAAACGAGGGCATTTGTCGCGGAGCACGTCACGTAGAGATGAT
CTGGAGAGCATCGGGTACGTGCTGGTGCATCTTGCAAAGGGACAACTTCC
TTGGGAGGACATTGCCGGACAGACGTGGGAAGAGGAATTTGAACGGATGG
GGCGGGTGAAGATGGAGATGAGTTTGGAAGATGTGTGTGTTGGAACGGCG
GGCATCCATGAGTTTCTGCAAGAAGTTTCTTCGACGGTGTTCAGGCAGAA
ACCCAATTACTGCTCTCTCATTCAGAAGCTGGAGTTTGCTATTGTTTCCA
TCTCCGGAGCATCCGGGCTTTCCTCCAGTTGGTTGGAGAAGTGCTAG
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protein sequence of Gchil7771.t1

>Gchil7771.t1 ID=Gchil7771.t1|Name=Gchil7771.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=299bp
MPFARNTLIANEYKVIRKVGDGGEGCVYHVKGTNGAHYAMKAARGHGFLR
KEYEMYWRLGCVGSHTEFFPTIYSYTIHGEHDVLIMSILDESLESLKDNN
RGRLSMRNVLLIGVELIKIIQQVHSKGILHLDLKPANIMLRNVGNRRKKV
NIIDFGCARLFIDPRSGRHIPAASHVSFDGSPVFAPKRGHLSRSTSRRDD
LESIGYVLVHLAKGQLPWEDIAGQTWEEEFERMGRVKMEMSLEDVCVGTA
GIHEFLQEVSSTVFRQKPNYCSLIQKLEFAIVSISGASGLSSSWLEKC*
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mRNA from alignment at tig00025321_pilon:1409290..1410186+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7771.t1 ID=Gchil7771.t1|Name=Gchil7771.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=897bp|location=Sequence derived from alignment at tig00025321_pilon:1409290..1410186+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCTTTTGCAAGGAATACACTCATCGCCAATGAGTACAAAGTGATTCG
AAAAGTGGGCGATGGTGGGGAGGGATGTGTGTATCATGTAAAAGGTACAA
ATGGGGCTCACTATGCTATGAAGGCGGCGAGGGGCCACGGATTTCTGAGG
AAAGAATATGAAATGTACTGGCGGCTTGGGTGCGTTGGAAGTCACACTGA
GTTTTTCCCTACGATCTACTCGTACACAATACACGGCGAACACGACGTGC
TGATCATGAGCATCCTCGACGAGTCGTTGGAAAGTTTGAAGGACAATAAT
CGTGGAAGGCTTTCCATGAGAAACGTTCTGTTGATCGGGGTTGAGCTCAT
TAAAATAATACAACAAGTTCACTCCAAAGGTATATTGCATCTCGACCTGA
AGCCTGCGAATATTATGTTGCGAAACGTGGGAAACCGGAGAAAAAAAGTG
AATATTATCGACTTTGGCTGTGCGCGCCTATTTATTGATCCGCGATCGGG
TCGTCACATCCCGGCCGCATCGCACGTCTCTTTCGATGGAAGCCCCGTGT
TTGCGCCCAAACGAGGGCATTTGTCGCGGAGCACGTCACGTAGAGATGAT
CTGGAGAGCATCGGGTACGTGCTGGTGCATCTTGCAAAGGGACAACTTCC
TTGGGAGGACATTGCCGGACAGACGTGGGAAGAGGAATTTGAACGGATGG
GGCGGGTGAAGATGGAGATGAGTTTGGAAGATGTGTGTGTTGGAACGGCG
GGCATCCATGAGTTTCTGCAAGAAGTTTCTTCGACGGTGTTCAGGCAGAA
ACCCAATTACTGCTCTCTCATTCAGAAGCTGGAGTTTGCTATTGTTTCCA
TCTCCGGAGCATCCGGGCTTTCCTCCAGTTGGTTGGAGAAGTGCTAG
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Coding sequence (CDS) from alignment at tig00025321_pilon:1409290..1410186+

>Gchil7771.t1 ID=Gchil7771.t1|Name=Gchil7771.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=897bp|location=Sequence derived from alignment at tig00025321_pilon:1409290..1410186+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCTTTTGCAAGGAATACACTCATCGCCAATGAGTACAAAGTGATTCG
AAAAGTGGGCGATGGTGGGGAGGGATGTGTGTATCATGTAAAAGGTACAA
ATGGGGCTCACTATGCTATGAAGGCGGCGAGGGGCCACGGATTTCTGAGG
AAAGAATATGAAATGTACTGGCGGCTTGGGTGCGTTGGAAGTCACACTGA
GTTTTTCCCTACGATCTACTCGTACACAATACACGGCGAACACGACGTGC
TGATCATGAGCATCCTCGACGAGTCGTTGGAAAGTTTGAAGGACAATAAT
CGTGGAAGGCTTTCCATGAGAAACGTTCTGTTGATCGGGGTTGAGCTCAT
TAAAATAATACAACAAGTTCACTCCAAAGGTATATTGCATCTCGACCTGA
AGCCTGCGAATATTATGTTGCGAAACGTGGGAAACCGGAGAAAAAAAGTG
AATATTATCGACTTTGGCTGTGCGCGCCTATTTATTGATCCGCGATCGGG
TCGTCACATCCCGGCCGCATCGCACGTCTCTTTCGATGGAAGCCCCGTGT
TTGCGCCCAAACGAGGGCATTTGTCGCGGAGCACGTCACGTAGAGATGAT
CTGGAGAGCATCGGGTACGTGCTGGTGCATCTTGCAAAGGGACAACTTCC
TTGGGAGGACATTGCCGGACAGACGTGGGAAGAGGAATTTGAACGGATGG
GGCGGGTGAAGATGGAGATGAGTTTGGAAGATGTGTGTGTTGGAACGGCG
GGCATCCATGAGTTTCTGCAAGAAGTTTCTTCGACGGTGTTCAGGCAGAA
ACCCAATTACTGCTCTCTCATTCAGAAGCTGGAGTTTGCTATTGTTTCCA
TCTCCGGAGCATCCGGGCTTTCCTCCAGTTGGTTGGAGAAGTGCTAG
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