Gchil7764.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7764.t1
Unique NameGchil7764.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length261
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:1301082..1301864 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7764Gchil7764Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 1301082..1301864 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7764.t1.start1Gchil7764.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 1301082..1301084 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7764.t1.CDS1Gchil7764.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 1301082..1301864 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7764.t1.exon1Gchil7764.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 1301082..1301864 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7764.t1.stop1Gchil7764.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 1301862..1301864 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7764.t1Gchil7764.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 1301082..1301864 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7764.t1 ID=Gchil7764.t1|Name=Gchil7764.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=261bp
MQFAILTLSCVLLLAICNSPAASVPLSTWTTIRHARVNTPVRATLLADGH
GGPPKDGKDGRDGKDGKNGKAGKDGKDGKDGKRGGTGGEGGDGGSGSESA
PGGDGGDGGDGALGGGGGDGGAGGTSYTSDGGDGGDGGLGGNGIIGGSGG
DGGHGGHSAVGDGGDGGDGATGGDGIVGGRGGAGGGGGIGLGGPGGNGGA
GGRGGGGALPGNGGHGGNGGFGLTGGNGGDGGDGGENFTDEEALSIVADA
LHPGKPGGKR*
back to top

spliced messenger RNA

>Gchil7764.t1 ID=Gchil7764.t1|Name=Gchil7764.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=783bp|location=Sequence derived from alignment at tig00025321_pilon:1301082..1301864+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGTTTGCAATATTGACGTTGAGTTGCGTCCTGCTTCTGGCCATTTG
CAACAGTCCCGCGGCCTCTGTGCCACTCTCTACTTGGACGACAATTCGGC
ATGCAAGAGTGAATACGCCAGTGAGAGCCACACTGCTCGCTGATGGGCAT
GGTGGCCCTCCGAAAGATGGAAAGGATGGAAGAGATGGAAAAGATGGAAA
GAATGGAAAGGCGGGGAAGGATGGGAAGGACGGGAAGGACGGAAAGAGAG
GGGGGACTGGGGGCGAAGGAGGAGACGGAGGCTCTGGAAGCGAGAGCGCT
CCTGGCGGAGATGGTGGAGATGGAGGAGATGGGGCGCTCGGTGGTGGTGG
AGGGGATGGTGGTGCGGGAGGTACCTCGTATACTTCTGATGGTGGGGACG
GTGGTGACGGTGGCTTAGGCGGAAACGGAATCATTGGTGGATCAGGCGGT
GACGGGGGACATGGCGGTCATTCTGCTGTGGGTGATGGCGGCGACGGTGG
AGATGGAGCAACTGGAGGTGATGGAATTGTTGGCGGACGTGGTGGTGCAG
GGGGTGGCGGTGGAATTGGCCTCGGCGGACCTGGTGGGAATGGTGGTGCC
GGCGGGAGGGGTGGAGGTGGGGCCTTGCCAGGAAACGGCGGCCACGGTGG
TAACGGGGGATTTGGGCTCACTGGCGGAAACGGTGGTGACGGAGGCGATG
GAGGTGAAAACTTTACGGATGAGGAGGCACTTTCTATTGTTGCCGATGCG
CTTCATCCTGGGAAACCGGGTGGCAAGCGCTAA
back to top

protein sequence of Gchil7764.t1

>Gchil7764.t1 ID=Gchil7764.t1|Name=Gchil7764.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=261bp
MQFAILTLSCVLLLAICNSPAASVPLSTWTTIRHARVNTPVRATLLADGH
GGPPKDGKDGRDGKDGKNGKAGKDGKDGKDGKRGGTGGEGGDGGSGSESA
PGGDGGDGGDGALGGGGGDGGAGGTSYTSDGGDGGDGGLGGNGIIGGSGG
DGGHGGHSAVGDGGDGGDGATGGDGIVGGRGGAGGGGGIGLGGPGGNGGA
GGRGGGGALPGNGGHGGNGGFGLTGGNGGDGGDGGENFTDEEALSIVADA
LHPGKPGGKR*
back to top

mRNA from alignment at tig00025321_pilon:1301082..1301864+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7764.t1 ID=Gchil7764.t1|Name=Gchil7764.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=783bp|location=Sequence derived from alignment at tig00025321_pilon:1301082..1301864+ (Gracilaria chilensis NLEC103_M9 male)
ATGCAGTTTGCAATATTGACGTTGAGTTGCGTCCTGCTTCTGGCCATTTG
CAACAGTCCCGCGGCCTCTGTGCCACTCTCTACTTGGACGACAATTCGGC
ATGCAAGAGTGAATACGCCAGTGAGAGCCACACTGCTCGCTGATGGGCAT
GGTGGCCCTCCGAAAGATGGAAAGGATGGAAGAGATGGAAAAGATGGAAA
GAATGGAAAGGCGGGGAAGGATGGGAAGGACGGGAAGGACGGAAAGAGAG
GGGGGACTGGGGGCGAAGGAGGAGACGGAGGCTCTGGAAGCGAGAGCGCT
CCTGGCGGAGATGGTGGAGATGGAGGAGATGGGGCGCTCGGTGGTGGTGG
AGGGGATGGTGGTGCGGGAGGTACCTCGTATACTTCTGATGGTGGGGACG
GTGGTGACGGTGGCTTAGGCGGAAACGGAATCATTGGTGGATCAGGCGGT
GACGGGGGACATGGCGGTCATTCTGCTGTGGGTGATGGCGGCGACGGTGG
AGATGGAGCAACTGGAGGTGATGGAATTGTTGGCGGACGTGGTGGTGCAG
GGGGTGGCGGTGGAATTGGCCTCGGCGGACCTGGTGGGAATGGTGGTGCC
GGCGGGAGGGGTGGAGGTGGGGCCTTGCCAGGAAACGGCGGCCACGGTGG
TAACGGGGGATTTGGGCTCACTGGCGGAAACGGTGGTGACGGAGGCGATG
GAGGTGAAAACTTTACGGATGAGGAGGCACTTTCTATTGTTGCCGATGCG
CTTCATCCTGGGAAACCGGGTGGCAAGCGCTAA
back to top

Coding sequence (CDS) from alignment at tig00025321_pilon:1301082..1301864+

>Gchil7764.t1 ID=Gchil7764.t1|Name=Gchil7764.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=783bp|location=Sequence derived from alignment at tig00025321_pilon:1301082..1301864+ (Gracilaria chilensis NLEC103_M9 male)
ATGCAGTTTGCAATATTGACGTTGAGTTGCGTCCTGCTTCTGGCCATTTG
CAACAGTCCCGCGGCCTCTGTGCCACTCTCTACTTGGACGACAATTCGGC
ATGCAAGAGTGAATACGCCAGTGAGAGCCACACTGCTCGCTGATGGGCAT
GGTGGCCCTCCGAAAGATGGAAAGGATGGAAGAGATGGAAAAGATGGAAA
GAATGGAAAGGCGGGGAAGGATGGGAAGGACGGGAAGGACGGAAAGAGAG
GGGGGACTGGGGGCGAAGGAGGAGACGGAGGCTCTGGAAGCGAGAGCGCT
CCTGGCGGAGATGGTGGAGATGGAGGAGATGGGGCGCTCGGTGGTGGTGG
AGGGGATGGTGGTGCGGGAGGTACCTCGTATACTTCTGATGGTGGGGACG
GTGGTGACGGTGGCTTAGGCGGAAACGGAATCATTGGTGGATCAGGCGGT
GACGGGGGACATGGCGGTCATTCTGCTGTGGGTGATGGCGGCGACGGTGG
AGATGGAGCAACTGGAGGTGATGGAATTGTTGGCGGACGTGGTGGTGCAG
GGGGTGGCGGTGGAATTGGCCTCGGCGGACCTGGTGGGAATGGTGGTGCC
GGCGGGAGGGGTGGAGGTGGGGCCTTGCCAGGAAACGGCGGCCACGGTGG
TAACGGGGGATTTGGGCTCACTGGCGGAAACGGTGGTGACGGAGGCGATG
GAGGTGAAAACTTTACGGATGAGGAGGCACTTTCTATTGTTGCCGATGCG
CTTCATCCTGGGAAACCGGGTGGCAAGCGCTAA
back to top