Gchil7739.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7739.t1
Unique NameGchil7739.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length503
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:860185..861693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7739Gchil7739Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 860185..861693 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7739.t1.stop1Gchil7739.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 860185..860187 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7739.t1.CDS1Gchil7739.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 860185..861693 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7739.t1.exon1Gchil7739.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 860185..861693 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7739.t1.start1Gchil7739.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 861691..861693 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7739.t1Gchil7739.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 860185..861693 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7739.t1 ID=Gchil7739.t1|Name=Gchil7739.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=503bp
MSSSMQSVPSDYESDPTTDYSHLCHHPDGIDHSYNLDEDDDAVLSGLGRE
AIPIGAWILSFKTLHPSVLLREQIEQLRINEGPEPRTRLALLDGAKTHTL
DICVGSLRIKRLAPSLLPQKNNDNTVNIDIDVHPEEMGHFLVVLENYLLL
NDISLHDWPPIFLALTKKCGLLPLHYAHMELLLDCTTDSWLRLPAFLHTY
DYVLQMLGDSLPRLFWGHIARRIVLEYDPILCSVDYAPMLWTDYSFHREN
GDSYSNVWQLLHHLDLVQVMLNYAIGLRSRYLGDFFHFVVNKGLHGTRDD
NRYITLLENVEWRYSQLALDRCISLTKSWPRVPKKALKKSMGTRLSLEKE
KQDSFNVTFKVTFERMECSTQIMNKECGATLSKLHYVVKALVVENKFFIE
LSLWRQEGIKRNQHAELEDAEHVFVGVAGLECDCLCEMGRMEVEKSDCSH
WPINKRHEKLTFTHRHPKKRLLLMKSVEEEWFQFHSNDCSLMLNVAVREI
DL*
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spliced messenger RNA

>Gchil7739.t1 ID=Gchil7739.t1|Name=Gchil7739.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1509bp|location=Sequence derived from alignment at tig00025321_pilon:860185..861693- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTTCTTCAATGCAGTCTGTTCCCTCCGACTACGAAAGCGACCCTAC
CACCGACTACTCCCACCTCTGCCACCACCCCGACGGTATTGACCATTCGT
ATAATTTAGACGAGGATGATGACGCCGTACTCAGCGGGCTCGGGCGCGAA
GCCATACCAATAGGTGCGTGGATTCTCAGCTTTAAAACTCTTCACCCATC
CGTCCTTCTTCGAGAGCAGATCGAGCAGCTTCGCATCAACGAGGGCCCTG
AGCCCCGCACACGCCTCGCCCTGCTTGACGGTGCCAAGACGCACACTCTG
GACATTTGTGTGGGCTCGCTTCGTATCAAGCGATTGGCCCCCTCCCTACT
GCCCCAAAAAAACAACGACAACACGGTCAATATCGATATAGACGTGCACC
CCGAAGAAATGGGACATTTTCTCGTTGTGCTGGAAAACTATTTACTTCTC
AACGACATCAGCCTGCACGATTGGCCTCCCATCTTTCTCGCACTCACCAA
GAAATGTGGGCTATTGCCGCTACACTATGCGCACATGGAGCTGCTGCTCG
ACTGCACTACCGACTCATGGCTACGCCTGCCGGCTTTTTTGCACACGTAC
GACTACGTGTTGCAGATGCTGGGCGATTCACTTCCGCGCCTATTCTGGGG
CCACATTGCACGTCGCATCGTTCTTGAGTACGATCCCATTTTGTGTTCCG
TCGACTATGCGCCCATGCTTTGGACGGACTATTCGTTTCACCGCGAGAAC
GGCGATTCGTATTCAAACGTATGGCAGCTGTTGCACCATCTCGACTTGGT
GCAAGTGATGTTGAACTACGCCATTGGACTGCGTTCCAGGTACCTGGGCG
ACTTTTTCCACTTTGTGGTGAACAAGGGCTTGCATGGCACTCGCGACGAC
AATCGCTACATCACATTGTTGGAAAACGTAGAATGGCGCTATAGCCAATT
GGCTCTTGATCGCTGCATTTCGCTGACGAAAAGCTGGCCTCGAGTGCCCA
AGAAGGCGCTCAAGAAATCTATGGGCACAAGACTATCGTTGGAAAAAGAA
AAACAAGACTCGTTCAATGTGACATTCAAGGTGACTTTTGAGAGGATGGA
GTGCAGCACCCAAATCATGAACAAGGAGTGCGGCGCAACATTATCCAAGC
TTCACTACGTTGTCAAGGCGCTGGTGGTCGAAAACAAGTTTTTCATTGAG
CTCAGCCTGTGGAGACAGGAAGGTATAAAGCGGAACCAACATGCAGAGTT
AGAAGATGCGGAGCACGTATTTGTCGGAGTGGCCGGGCTTGAATGCGACT
GCCTCTGTGAGATGGGAAGGATGGAAGTAGAAAAATCAGATTGCAGCCAC
TGGCCCATCAACAAACGGCATGAAAAGCTGACGTTCACCCATCGACACCC
GAAGAAACGGTTGTTACTGATGAAGAGCGTCGAGGAGGAGTGGTTCCAGT
TTCACTCAAACGATTGCAGCCTGATGTTGAACGTCGCGGTGCGTGAAATT
GATCTTTGA
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protein sequence of Gchil7739.t1

>Gchil7739.t1 ID=Gchil7739.t1|Name=Gchil7739.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=503bp
MSSSMQSVPSDYESDPTTDYSHLCHHPDGIDHSYNLDEDDDAVLSGLGRE
AIPIGAWILSFKTLHPSVLLREQIEQLRINEGPEPRTRLALLDGAKTHTL
DICVGSLRIKRLAPSLLPQKNNDNTVNIDIDVHPEEMGHFLVVLENYLLL
NDISLHDWPPIFLALTKKCGLLPLHYAHMELLLDCTTDSWLRLPAFLHTY
DYVLQMLGDSLPRLFWGHIARRIVLEYDPILCSVDYAPMLWTDYSFHREN
GDSYSNVWQLLHHLDLVQVMLNYAIGLRSRYLGDFFHFVVNKGLHGTRDD
NRYITLLENVEWRYSQLALDRCISLTKSWPRVPKKALKKSMGTRLSLEKE
KQDSFNVTFKVTFERMECSTQIMNKECGATLSKLHYVVKALVVENKFFIE
LSLWRQEGIKRNQHAELEDAEHVFVGVAGLECDCLCEMGRMEVEKSDCSH
WPINKRHEKLTFTHRHPKKRLLLMKSVEEEWFQFHSNDCSLMLNVAVREI
DL*
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mRNA from alignment at tig00025321_pilon:860185..861693-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7739.t1 ID=Gchil7739.t1|Name=Gchil7739.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1509bp|location=Sequence derived from alignment at tig00025321_pilon:860185..861693- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTCTTCAATGCAGTCTGTTCCCTCCGACTACGAAAGCGACCCTAC
CACCGACTACTCCCACCTCTGCCACCACCCCGACGGTATTGACCATTCGT
ATAATTTAGACGAGGATGATGACGCCGTACTCAGCGGGCTCGGGCGCGAA
GCCATACCAATAGGTGCGTGGATTCTCAGCTTTAAAACTCTTCACCCATC
CGTCCTTCTTCGAGAGCAGATCGAGCAGCTTCGCATCAACGAGGGCCCTG
AGCCCCGCACACGCCTCGCCCTGCTTGACGGTGCCAAGACGCACACTCTG
GACATTTGTGTGGGCTCGCTTCGTATCAAGCGATTGGCCCCCTCCCTACT
GCCCCAAAAAAACAACGACAACACGGTCAATATCGATATAGACGTGCACC
CCGAAGAAATGGGACATTTTCTCGTTGTGCTGGAAAACTATTTACTTCTC
AACGACATCAGCCTGCACGATTGGCCTCCCATCTTTCTCGCACTCACCAA
GAAATGTGGGCTATTGCCGCTACACTATGCGCACATGGAGCTGCTGCTCG
ACTGCACTACCGACTCATGGCTACGCCTGCCGGCTTTTTTGCACACGTAC
GACTACGTGTTGCAGATGCTGGGCGATTCACTTCCGCGCCTATTCTGGGG
CCACATTGCACGTCGCATCGTTCTTGAGTACGATCCCATTTTGTGTTCCG
TCGACTATGCGCCCATGCTTTGGACGGACTATTCGTTTCACCGCGAGAAC
GGCGATTCGTATTCAAACGTATGGCAGCTGTTGCACCATCTCGACTTGGT
GCAAGTGATGTTGAACTACGCCATTGGACTGCGTTCCAGGTACCTGGGCG
ACTTTTTCCACTTTGTGGTGAACAAGGGCTTGCATGGCACTCGCGACGAC
AATCGCTACATCACATTGTTGGAAAACGTAGAATGGCGCTATAGCCAATT
GGCTCTTGATCGCTGCATTTCGCTGACGAAAAGCTGGCCTCGAGTGCCCA
AGAAGGCGCTCAAGAAATCTATGGGCACAAGACTATCGTTGGAAAAAGAA
AAACAAGACTCGTTCAATGTGACATTCAAGGTGACTTTTGAGAGGATGGA
GTGCAGCACCCAAATCATGAACAAGGAGTGCGGCGCAACATTATCCAAGC
TTCACTACGTTGTCAAGGCGCTGGTGGTCGAAAACAAGTTTTTCATTGAG
CTCAGCCTGTGGAGACAGGAAGGTATAAAGCGGAACCAACATGCAGAGTT
AGAAGATGCGGAGCACGTATTTGTCGGAGTGGCCGGGCTTGAATGCGACT
GCCTCTGTGAGATGGGAAGGATGGAAGTAGAAAAATCAGATTGCAGCCAC
TGGCCCATCAACAAACGGCATGAAAAGCTGACGTTCACCCATCGACACCC
GAAGAAACGGTTGTTACTGATGAAGAGCGTCGAGGAGGAGTGGTTCCAGT
TTCACTCAAACGATTGCAGCCTGATGTTGAACGTCGCGGTGCGTGAAATT
GATCTTTGA
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Coding sequence (CDS) from alignment at tig00025321_pilon:860185..861693-

>Gchil7739.t1 ID=Gchil7739.t1|Name=Gchil7739.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1509bp|location=Sequence derived from alignment at tig00025321_pilon:860185..861693- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTCTTCAATGCAGTCTGTTCCCTCCGACTACGAAAGCGACCCTAC
CACCGACTACTCCCACCTCTGCCACCACCCCGACGGTATTGACCATTCGT
ATAATTTAGACGAGGATGATGACGCCGTACTCAGCGGGCTCGGGCGCGAA
GCCATACCAATAGGTGCGTGGATTCTCAGCTTTAAAACTCTTCACCCATC
CGTCCTTCTTCGAGAGCAGATCGAGCAGCTTCGCATCAACGAGGGCCCTG
AGCCCCGCACACGCCTCGCCCTGCTTGACGGTGCCAAGACGCACACTCTG
GACATTTGTGTGGGCTCGCTTCGTATCAAGCGATTGGCCCCCTCCCTACT
GCCCCAAAAAAACAACGACAACACGGTCAATATCGATATAGACGTGCACC
CCGAAGAAATGGGACATTTTCTCGTTGTGCTGGAAAACTATTTACTTCTC
AACGACATCAGCCTGCACGATTGGCCTCCCATCTTTCTCGCACTCACCAA
GAAATGTGGGCTATTGCCGCTACACTATGCGCACATGGAGCTGCTGCTCG
ACTGCACTACCGACTCATGGCTACGCCTGCCGGCTTTTTTGCACACGTAC
GACTACGTGTTGCAGATGCTGGGCGATTCACTTCCGCGCCTATTCTGGGG
CCACATTGCACGTCGCATCGTTCTTGAGTACGATCCCATTTTGTGTTCCG
TCGACTATGCGCCCATGCTTTGGACGGACTATTCGTTTCACCGCGAGAAC
GGCGATTCGTATTCAAACGTATGGCAGCTGTTGCACCATCTCGACTTGGT
GCAAGTGATGTTGAACTACGCCATTGGACTGCGTTCCAGGTACCTGGGCG
ACTTTTTCCACTTTGTGGTGAACAAGGGCTTGCATGGCACTCGCGACGAC
AATCGCTACATCACATTGTTGGAAAACGTAGAATGGCGCTATAGCCAATT
GGCTCTTGATCGCTGCATTTCGCTGACGAAAAGCTGGCCTCGAGTGCCCA
AGAAGGCGCTCAAGAAATCTATGGGCACAAGACTATCGTTGGAAAAAGAA
AAACAAGACTCGTTCAATGTGACATTCAAGGTGACTTTTGAGAGGATGGA
GTGCAGCACCCAAATCATGAACAAGGAGTGCGGCGCAACATTATCCAAGC
TTCACTACGTTGTCAAGGCGCTGGTGGTCGAAAACAAGTTTTTCATTGAG
CTCAGCCTGTGGAGACAGGAAGGTATAAAGCGGAACCAACATGCAGAGTT
AGAAGATGCGGAGCACGTATTTGTCGGAGTGGCCGGGCTTGAATGCGACT
GCCTCTGTGAGATGGGAAGGATGGAAGTAGAAAAATCAGATTGCAGCCAC
TGGCCCATCAACAAACGGCATGAAAAGCTGACGTTCACCCATCGACACCC
GAAGAAACGGTTGTTACTGATGAAGAGCGTCGAGGAGGAGTGGTTCCAGT
TTCACTCAAACGATTGCAGCCTGATGTTGAACGTCGCGGTGCGTGAAATT
GATCTTTGA
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