Gchil7729.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7729.t1
Unique NameGchil7729.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length518
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:760716..762269 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7729Gchil7729Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 760716..762269 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7729.t1.stop1Gchil7729.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 760716..760718 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7729.t1.CDS1Gchil7729.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 760716..762269 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7729.t1.exon1Gchil7729.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 760716..762269 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7729.t1.start1Gchil7729.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 762267..762269 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7729.t1Gchil7729.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 760716..762269 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7729.t1 ID=Gchil7729.t1|Name=Gchil7729.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=518bp
MKSVIVATLLLAFLLHPTATHPIPTITSLAPLIRAGRGGSGGSGRVGGRG
GSGGSGRVGGRGGDGGRGVSLGPGGDGGDGGVAVPGGVGGSGGDGGDGDF
GARGGNGGRGGDGTAPMAMGGSGGNGGEGGEFADGGNGGAGGEGDLAGGG
GGNGGKGGDFGGRGGDGGMGGGGDFVLTAGGGGNGGMGGSGGDGGTGGMG
GGGFGVSVGGDGGSGGKGGVDGNGGDGGNGGTGVGVVIGGAGGAGGDGGA
NGDGGDGGDAGFGSLGGKGGDGGDGTFNMDGGAGGNGGDGGDGALGVGGA
GGDGGDGGFSGDGGSGGSGGAEGGVGGTGGNGGVLGNGGMGGSGGREGGL
GGDGGLGGFGGNGGAGGTGGDSFQSKGGDGGNGGTGGLEGNGGAGGPGGE
SLFEIGGDGGAGGMGGFIGDGGVGGVGGNGVTVGGNGGDGGDGGLSGDGG
TGGDGGFGIIGGDGGMGGDGGDGNGVDEPGNGGTGGNGGPGELLFGFGGD
GGDGGDDFPSPSDAEML*
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spliced messenger RNA

>Gchil7729.t1 ID=Gchil7729.t1|Name=Gchil7729.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1554bp|location=Sequence derived from alignment at tig00025321_pilon:760716..762269- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGTCGGTTATCGTTGCCACCCTGTTGCTAGCATTTTTGCTACACCC
CACCGCAACTCACCCAATACCCACAATCACATCTCTTGCTCCCTTGATCC
GCGCGGGCCGCGGCGGTTCTGGCGGCTCCGGCCGCGTTGGCGGCCGTGGC
GGTTCCGGCGGCTCCGGTCGCGTTGGCGGCCGCGGCGGCGACGGAGGCCG
TGGTGTCAGCTTAGGTCCAGGTGGTGATGGTGGTGATGGAGGCGTTGCTG
TCCCTGGGGGCGTCGGTGGCAGTGGTGGTGATGGAGGAGATGGGGACTTT
GGCGCTCGAGGAGGGAATGGAGGAAGAGGTGGTGATGGAACCGCTCCTAT
GGCCATGGGAGGCAGCGGTGGAAATGGTGGAGAAGGAGGCGAATTTGCGG
ATGGAGGCAACGGTGGTGCTGGTGGTGAAGGCGACCTGGCGGGCGGCGGT
GGGGGAAATGGTGGCAAAGGAGGCGACTTTGGCGGACGTGGAGGCGACGG
CGGAATGGGAGGGGGCGGTGACTTTGTGCTTACAGCCGGTGGTGGTGGAA
ACGGTGGAATGGGAGGGTCTGGCGGCGATGGCGGAACAGGTGGCATGGGC
GGTGGTGGGTTCGGTGTGAGTGTCGGCGGGGATGGTGGGAGCGGTGGAAA
AGGAGGTGTGGATGGAAATGGGGGGGACGGGGGAAATGGTGGCACCGGGG
TTGGAGTGGTGATTGGTGGAGCGGGAGGTGCTGGTGGTGATGGAGGGGCA
AATGGAGATGGTGGTGATGGAGGAGACGCTGGTTTCGGGAGTCTTGGCGG
AAAGGGAGGGGATGGCGGGGACGGTACGTTCAACATGGATGGTGGAGCAG
GTGGCAACGGTGGGGATGGCGGAGACGGCGCTCTGGGTGTCGGCGGTGCA
GGGGGAGACGGTGGAGACGGTGGCTTCTCAGGTGATGGAGGCTCTGGTGG
GTCTGGTGGGGCAGAAGGCGGTGTGGGTGGTACTGGTGGAAACGGCGGAG
TTCTCGGCAATGGCGGTATGGGAGGAAGTGGTGGCCGTGAAGGAGGCTTG
GGAGGCGATGGTGGCCTTGGCGGATTTGGTGGAAATGGAGGTGCCGGTGG
AACCGGTGGCGATTCTTTTCAGTCCAAAGGAGGCGATGGCGGCAATGGTG
GTACCGGAGGACTAGAAGGCAACGGCGGGGCGGGCGGTCCAGGAGGTGAA
TCGCTTTTCGAGATTGGCGGTGATGGCGGTGCCGGTGGGATGGGTGGATT
CATAGGTGATGGTGGGGTTGGCGGCGTTGGCGGCAACGGTGTGACCGTTG
GCGGCAACGGAGGAGATGGAGGTGACGGGGGATTGAGCGGAGATGGCGGG
ACCGGAGGTGACGGGGGGTTCGGAATTATTGGTGGGGATGGTGGAATGGG
TGGGGATGGAGGCGATGGCAACGGTGTGGATGAACCCGGAAATGGTGGCA
CTGGTGGCAATGGTGGACCTGGAGAGCTTTTGTTTGGGTTTGGAGGTGAT
GGTGGCGATGGTGGCGATGATTTCCCATCGCCATCCGACGCAGAGATGCT
GTAG
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protein sequence of Gchil7729.t1

>Gchil7729.t1 ID=Gchil7729.t1|Name=Gchil7729.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=518bp
MKSVIVATLLLAFLLHPTATHPIPTITSLAPLIRAGRGGSGGSGRVGGRG
GSGGSGRVGGRGGDGGRGVSLGPGGDGGDGGVAVPGGVGGSGGDGGDGDF
GARGGNGGRGGDGTAPMAMGGSGGNGGEGGEFADGGNGGAGGEGDLAGGG
GGNGGKGGDFGGRGGDGGMGGGGDFVLTAGGGGNGGMGGSGGDGGTGGMG
GGGFGVSVGGDGGSGGKGGVDGNGGDGGNGGTGVGVVIGGAGGAGGDGGA
NGDGGDGGDAGFGSLGGKGGDGGDGTFNMDGGAGGNGGDGGDGALGVGGA
GGDGGDGGFSGDGGSGGSGGAEGGVGGTGGNGGVLGNGGMGGSGGREGGL
GGDGGLGGFGGNGGAGGTGGDSFQSKGGDGGNGGTGGLEGNGGAGGPGGE
SLFEIGGDGGAGGMGGFIGDGGVGGVGGNGVTVGGNGGDGGDGGLSGDGG
TGGDGGFGIIGGDGGMGGDGGDGNGVDEPGNGGTGGNGGPGELLFGFGGD
GGDGGDDFPSPSDAEML*
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mRNA from alignment at tig00025321_pilon:760716..762269-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7729.t1 ID=Gchil7729.t1|Name=Gchil7729.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1554bp|location=Sequence derived from alignment at tig00025321_pilon:760716..762269- (Gracilaria chilensis NLEC103_M9 male)
ATGAAGTCGGTTATCGTTGCCACCCTGTTGCTAGCATTTTTGCTACACCC
CACCGCAACTCACCCAATACCCACAATCACATCTCTTGCTCCCTTGATCC
GCGCGGGCCGCGGCGGTTCTGGCGGCTCCGGCCGCGTTGGCGGCCGTGGC
GGTTCCGGCGGCTCCGGTCGCGTTGGCGGCCGCGGCGGCGACGGAGGCCG
TGGTGTCAGCTTAGGTCCAGGTGGTGATGGTGGTGATGGAGGCGTTGCTG
TCCCTGGGGGCGTCGGTGGCAGTGGTGGTGATGGAGGAGATGGGGACTTT
GGCGCTCGAGGAGGGAATGGAGGAAGAGGTGGTGATGGAACCGCTCCTAT
GGCCATGGGAGGCAGCGGTGGAAATGGTGGAGAAGGAGGCGAATTTGCGG
ATGGAGGCAACGGTGGTGCTGGTGGTGAAGGCGACCTGGCGGGCGGCGGT
GGGGGAAATGGTGGCAAAGGAGGCGACTTTGGCGGACGTGGAGGCGACGG
CGGAATGGGAGGGGGCGGTGACTTTGTGCTTACAGCCGGTGGTGGTGGAA
ACGGTGGAATGGGAGGGTCTGGCGGCGATGGCGGAACAGGTGGCATGGGC
GGTGGTGGGTTCGGTGTGAGTGTCGGCGGGGATGGTGGGAGCGGTGGAAA
AGGAGGTGTGGATGGAAATGGGGGGGACGGGGGAAATGGTGGCACCGGGG
TTGGAGTGGTGATTGGTGGAGCGGGAGGTGCTGGTGGTGATGGAGGGGCA
AATGGAGATGGTGGTGATGGAGGAGACGCTGGTTTCGGGAGTCTTGGCGG
AAAGGGAGGGGATGGCGGGGACGGTACGTTCAACATGGATGGTGGAGCAG
GTGGCAACGGTGGGGATGGCGGAGACGGCGCTCTGGGTGTCGGCGGTGCA
GGGGGAGACGGTGGAGACGGTGGCTTCTCAGGTGATGGAGGCTCTGGTGG
GTCTGGTGGGGCAGAAGGCGGTGTGGGTGGTACTGGTGGAAACGGCGGAG
TTCTCGGCAATGGCGGTATGGGAGGAAGTGGTGGCCGTGAAGGAGGCTTG
GGAGGCGATGGTGGCCTTGGCGGATTTGGTGGAAATGGAGGTGCCGGTGG
AACCGGTGGCGATTCTTTTCAGTCCAAAGGAGGCGATGGCGGCAATGGTG
GTACCGGAGGACTAGAAGGCAACGGCGGGGCGGGCGGTCCAGGAGGTGAA
TCGCTTTTCGAGATTGGCGGTGATGGCGGTGCCGGTGGGATGGGTGGATT
CATAGGTGATGGTGGGGTTGGCGGCGTTGGCGGCAACGGTGTGACCGTTG
GCGGCAACGGAGGAGATGGAGGTGACGGGGGATTGAGCGGAGATGGCGGG
ACCGGAGGTGACGGGGGGTTCGGAATTATTGGTGGGGATGGTGGAATGGG
TGGGGATGGAGGCGATGGCAACGGTGTGGATGAACCCGGAAATGGTGGCA
CTGGTGGCAATGGTGGACCTGGAGAGCTTTTGTTTGGGTTTGGAGGTGAT
GGTGGCGATGGTGGCGATGATTTCCCATCGCCATCCGACGCAGAGATGCT
GTAG
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Coding sequence (CDS) from alignment at tig00025321_pilon:760716..762269-

>Gchil7729.t1 ID=Gchil7729.t1|Name=Gchil7729.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1554bp|location=Sequence derived from alignment at tig00025321_pilon:760716..762269- (Gracilaria chilensis NLEC103_M9 male)
ATGAAGTCGGTTATCGTTGCCACCCTGTTGCTAGCATTTTTGCTACACCC
CACCGCAACTCACCCAATACCCACAATCACATCTCTTGCTCCCTTGATCC
GCGCGGGCCGCGGCGGTTCTGGCGGCTCCGGCCGCGTTGGCGGCCGTGGC
GGTTCCGGCGGCTCCGGTCGCGTTGGCGGCCGCGGCGGCGACGGAGGCCG
TGGTGTCAGCTTAGGTCCAGGTGGTGATGGTGGTGATGGAGGCGTTGCTG
TCCCTGGGGGCGTCGGTGGCAGTGGTGGTGATGGAGGAGATGGGGACTTT
GGCGCTCGAGGAGGGAATGGAGGAAGAGGTGGTGATGGAACCGCTCCTAT
GGCCATGGGAGGCAGCGGTGGAAATGGTGGAGAAGGAGGCGAATTTGCGG
ATGGAGGCAACGGTGGTGCTGGTGGTGAAGGCGACCTGGCGGGCGGCGGT
GGGGGAAATGGTGGCAAAGGAGGCGACTTTGGCGGACGTGGAGGCGACGG
CGGAATGGGAGGGGGCGGTGACTTTGTGCTTACAGCCGGTGGTGGTGGAA
ACGGTGGAATGGGAGGGTCTGGCGGCGATGGCGGAACAGGTGGCATGGGC
GGTGGTGGGTTCGGTGTGAGTGTCGGCGGGGATGGTGGGAGCGGTGGAAA
AGGAGGTGTGGATGGAAATGGGGGGGACGGGGGAAATGGTGGCACCGGGG
TTGGAGTGGTGATTGGTGGAGCGGGAGGTGCTGGTGGTGATGGAGGGGCA
AATGGAGATGGTGGTGATGGAGGAGACGCTGGTTTCGGGAGTCTTGGCGG
AAAGGGAGGGGATGGCGGGGACGGTACGTTCAACATGGATGGTGGAGCAG
GTGGCAACGGTGGGGATGGCGGAGACGGCGCTCTGGGTGTCGGCGGTGCA
GGGGGAGACGGTGGAGACGGTGGCTTCTCAGGTGATGGAGGCTCTGGTGG
GTCTGGTGGGGCAGAAGGCGGTGTGGGTGGTACTGGTGGAAACGGCGGAG
TTCTCGGCAATGGCGGTATGGGAGGAAGTGGTGGCCGTGAAGGAGGCTTG
GGAGGCGATGGTGGCCTTGGCGGATTTGGTGGAAATGGAGGTGCCGGTGG
AACCGGTGGCGATTCTTTTCAGTCCAAAGGAGGCGATGGCGGCAATGGTG
GTACCGGAGGACTAGAAGGCAACGGCGGGGCGGGCGGTCCAGGAGGTGAA
TCGCTTTTCGAGATTGGCGGTGATGGCGGTGCCGGTGGGATGGGTGGATT
CATAGGTGATGGTGGGGTTGGCGGCGTTGGCGGCAACGGTGTGACCGTTG
GCGGCAACGGAGGAGATGGAGGTGACGGGGGATTGAGCGGAGATGGCGGG
ACCGGAGGTGACGGGGGGTTCGGAATTATTGGTGGGGATGGTGGAATGGG
TGGGGATGGAGGCGATGGCAACGGTGTGGATGAACCCGGAAATGGTGGCA
CTGGTGGCAATGGTGGACCTGGAGAGCTTTTGTTTGGGTTTGGAGGTGAT
GGTGGCGATGGTGGCGATGATTTCCCATCGCCATCCGACGCAGAGATGCT
GTAG
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