Gchil7407.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7407.t1
Unique NameGchil7407.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length93
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:969207..969485 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7407Gchil7407Gracilaria chilensis NLEC103_M9 malegenetig00000007_pilon 969207..969485 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7407.t1.stop1Gchil7407.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000007_pilon 969207..969209 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7407.t1.CDS1Gchil7407.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000007_pilon 969207..969485 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7407.t1.exon1Gchil7407.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000007_pilon 969207..969485 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7407.t1.start1Gchil7407.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000007_pilon 969483..969485 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7407.t1Gchil7407.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000007_pilon 969207..969485 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7407.t1 ID=Gchil7407.t1|Name=Gchil7407.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=93bp
MKSCFTAQGGMLTRTERKAIARLHKHRAAAKVPRAEARPAVCENTDILFS
FYCTATTDAHRAHQCARAAKKAADRRVRKVDVSGTTAVKRLS*
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spliced messenger RNA

>Gchil7407.t1 ID=Gchil7407.t1|Name=Gchil7407.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=279bp|location=Sequence derived from alignment at tig00000007_pilon:969207..969485- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGTCCTGCTTCACTGCGCAGGGCGGCATGCTCACACGCACCGAGAG
GAAGGCCATCGCCCGTCTTCACAAGCACCGCGCCGCCGCCAAGGTACCGC
GCGCAGAGGCCCGTCCAGCCGTGTGCGAAAACACCGACATCCTCTTTAGC
TTCTACTGCACCGCTACAACCGACGCGCACCGCGCGCATCAGTGCGCCAG
GGCAGCAAAGAAGGCCGCCGATCGTCGCGTCAGAAAAGTTGACGTTTCCG
GAACTACAGCTGTCAAAAGACTGTCCTGA
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protein sequence of Gchil7407.t1

>Gchil7407.t1 ID=Gchil7407.t1|Name=Gchil7407.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=93bp
MKSCFTAQGGMLTRTERKAIARLHKHRAAAKVPRAEARPAVCENTDILFS
FYCTATTDAHRAHQCARAAKKAADRRVRKVDVSGTTAVKRLS*
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mRNA from alignment at tig00000007_pilon:969207..969485-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7407.t1 ID=Gchil7407.t1|Name=Gchil7407.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=279bp|location=Sequence derived from alignment at tig00000007_pilon:969207..969485- (Gracilaria chilensis NLEC103_M9 male)
ATGAAGTCCTGCTTCACTGCGCAGGGCGGCATGCTCACACGCACCGAGAG
GAAGGCCATCGCCCGTCTTCACAAGCACCGCGCCGCCGCCAAGGTACCGC
GCGCAGAGGCCCGTCCAGCCGTGTGCGAAAACACCGACATCCTCTTTAGC
TTCTACTGCACCGCTACAACCGACGCGCACCGCGCGCATCAGTGCGCCAG
GGCAGCAAAGAAGGCCGCCGATCGTCGCGTCAGAAAAGTTGACGTTTCCG
GAACTACAGCTGTCAAAAGACTGTCCTGA
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Coding sequence (CDS) from alignment at tig00000007_pilon:969207..969485-

>Gchil7407.t1 ID=Gchil7407.t1|Name=Gchil7407.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=279bp|location=Sequence derived from alignment at tig00000007_pilon:969207..969485- (Gracilaria chilensis NLEC103_M9 male)
ATGAAGTCCTGCTTCACTGCGCAGGGCGGCATGCTCACACGCACCGAGAG
GAAGGCCATCGCCCGTCTTCACAAGCACCGCGCCGCCGCCAAGGTACCGC
GCGCAGAGGCCCGTCCAGCCGTGTGCGAAAACACCGACATCCTCTTTAGC
TTCTACTGCACCGCTACAACCGACGCGCACCGCGCGCATCAGTGCGCCAG
GGCAGCAAAGAAGGCCGCCGATCGTCGCGTCAGAAAAGTTGACGTTTCCG
GAACTACAGCTGTCAAAAGACTGTCCTGA
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