Gchil7295.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7295.t1
Unique NameGchil7295.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length463
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:978439..979827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7295Gchil7295Gracilaria chilensis NLEC103_M9 malegenetig00004441_pilon 978439..979827 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7295.t1.stop1Gchil7295.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004441_pilon 978439..978441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7295.t1.CDS1Gchil7295.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004441_pilon 978439..979827 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7295.t1.exon1Gchil7295.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004441_pilon 978439..979827 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7295.t1.start1Gchil7295.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004441_pilon 979825..979827 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7295.t1Gchil7295.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004441_pilon 978439..979827 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7295.t1 ID=Gchil7295.t1|Name=Gchil7295.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=463bp
MVFIAIGAIKAAKAAKKEYDKDKKRSEIITPLHNSRRNEFDNGPSSASPD
WWSSDQPQDSGPQPRQVSRDSFGAWSRDQLRDQIAEQQARQEEYDFRFRE
QLSNSSASLGSIAVPSASHSPAVPVSQTRSDLDKAEHSHGSLKQILPPTI
LPPLLENEEESKGKIPDDRNLSASAVTAPTAKPPRPTKQPTYVEGSYEAN
LRVTSKDVYHKKGVECHVADGSRGRMRVQDLSTNDRKSDIRAVHGPDNAS
EPCDGSYESAFRKEKVTPQHPSRANLSVVDGINQSHATPPSAFSFSGNRL
TKRRSMPMHFVTANSPTAEGTTTSQTAEKHTVQGSAFGNASTVRKAYRAP
SSSSNSPDGIQPILLRTKSAVNGDAKQTKPGSAFQQEGLYTKTRRKPRDP
GAASTGLRTCRPPRTNLQGNVDQDMGINPSHGVNNDAPAGTSCMSAEGSM
KKKRERRPLWDK*
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spliced messenger RNA

>Gchil7295.t1 ID=Gchil7295.t1|Name=Gchil7295.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1389bp|location=Sequence derived from alignment at tig00004441_pilon:978439..979827- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTTTCATAGCGATTGGCGCGATAAAAGCCGCTAAAGCTGCGAAAAA
GGAGTACGACAAGGATAAGAAACGCTCAGAAATCATCACACCATTACACA
ACTCCCGTCGCAACGAGTTTGACAATGGTCCGTCATCAGCCTCTCCAGAT
TGGTGGAGCTCTGACCAGCCGCAAGATTCGGGGCCACAGCCACGGCAGGT
TTCACGCGATTCGTTTGGCGCTTGGAGTCGTGACCAACTTCGAGACCAAA
TCGCTGAACAACAGGCAAGGCAGGAGGAGTACGATTTCAGGTTTCGTGAA
CAACTTTCAAACTCTTCAGCATCTCTTGGTTCTATCGCGGTACCTTCTGC
TTCTCATTCACCAGCCGTTCCTGTCTCACAGACGCGCTCTGACTTGGACA
AAGCGGAACACAGTCACGGGAGTCTGAAGCAAATACTTCCGCCCACAATT
TTGCCGCCTTTATTAGAGAATGAAGAAGAATCAAAAGGGAAAATTCCGGA
TGACAGAAACCTCTCCGCTTCGGCTGTGACGGCACCAACAGCAAAACCGC
CACGTCCTACAAAACAGCCTACATACGTCGAAGGCTCATACGAAGCAAAC
CTCAGGGTAACCTCGAAAGATGTATATCATAAAAAGGGGGTAGAATGCCA
TGTTGCCGATGGTTCTCGTGGACGGATGCGCGTTCAGGACTTGAGCACGA
ACGATAGGAAATCAGATATCCGAGCCGTACACGGTCCAGATAACGCGTCA
GAACCGTGCGATGGCTCCTACGAATCAGCCTTCCGGAAGGAAAAGGTGAC
GCCGCAACATCCATCCAGGGCCAACTTGAGCGTTGTGGATGGTATAAATC
AATCGCACGCCACGCCCCCTTCGGCGTTTTCGTTTTCTGGGAACCGTCTG
ACGAAACGGCGTTCTATGCCAATGCATTTTGTGACAGCAAACTCTCCGAC
TGCTGAAGGCACCACAACATCGCAAACCGCCGAGAAGCATACAGTACAGG
GCAGCGCATTCGGCAATGCATCCACGGTAAGAAAAGCATATAGGGCACCA
TCAAGTTCTTCAAATAGCCCTGACGGAATACAACCTATTCTGTTGAGGAC
AAAAAGTGCAGTCAACGGGGACGCTAAACAGACAAAGCCAGGAAGTGCAT
TTCAGCAAGAAGGCTTGTACACGAAAACGAGAAGAAAGCCTCGCGACCCT
GGTGCGGCGAGTACAGGACTTCGTACATGCCGTCCTCCAAGGACTAATTT
GCAAGGCAATGTGGACCAAGATATGGGGATAAACCCGTCCCATGGGGTGA
ACAATGATGCACCCGCTGGAACAAGTTGCATGTCTGCGGAAGGCAGCATG
AAAAAGAAGCGCGAGAGGCGACCGCTGTGGGATAAGTAG
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protein sequence of Gchil7295.t1

>Gchil7295.t1 ID=Gchil7295.t1|Name=Gchil7295.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=463bp
MVFIAIGAIKAAKAAKKEYDKDKKRSEIITPLHNSRRNEFDNGPSSASPD
WWSSDQPQDSGPQPRQVSRDSFGAWSRDQLRDQIAEQQARQEEYDFRFRE
QLSNSSASLGSIAVPSASHSPAVPVSQTRSDLDKAEHSHGSLKQILPPTI
LPPLLENEEESKGKIPDDRNLSASAVTAPTAKPPRPTKQPTYVEGSYEAN
LRVTSKDVYHKKGVECHVADGSRGRMRVQDLSTNDRKSDIRAVHGPDNAS
EPCDGSYESAFRKEKVTPQHPSRANLSVVDGINQSHATPPSAFSFSGNRL
TKRRSMPMHFVTANSPTAEGTTTSQTAEKHTVQGSAFGNASTVRKAYRAP
SSSSNSPDGIQPILLRTKSAVNGDAKQTKPGSAFQQEGLYTKTRRKPRDP
GAASTGLRTCRPPRTNLQGNVDQDMGINPSHGVNNDAPAGTSCMSAEGSM
KKKRERRPLWDK*
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mRNA from alignment at tig00004441_pilon:978439..979827-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7295.t1 ID=Gchil7295.t1|Name=Gchil7295.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1389bp|location=Sequence derived from alignment at tig00004441_pilon:978439..979827- (Gracilaria chilensis NLEC103_M9 male)
ATGGTTTTCATAGCGATTGGCGCGATAAAAGCCGCTAAAGCTGCGAAAAA
GGAGTACGACAAGGATAAGAAACGCTCAGAAATCATCACACCATTACACA
ACTCCCGTCGCAACGAGTTTGACAATGGTCCGTCATCAGCCTCTCCAGAT
TGGTGGAGCTCTGACCAGCCGCAAGATTCGGGGCCACAGCCACGGCAGGT
TTCACGCGATTCGTTTGGCGCTTGGAGTCGTGACCAACTTCGAGACCAAA
TCGCTGAACAACAGGCAAGGCAGGAGGAGTACGATTTCAGGTTTCGTGAA
CAACTTTCAAACTCTTCAGCATCTCTTGGTTCTATCGCGGTACCTTCTGC
TTCTCATTCACCAGCCGTTCCTGTCTCACAGACGCGCTCTGACTTGGACA
AAGCGGAACACAGTCACGGGAGTCTGAAGCAAATACTTCCGCCCACAATT
TTGCCGCCTTTATTAGAGAATGAAGAAGAATCAAAAGGGAAAATTCCGGA
TGACAGAAACCTCTCCGCTTCGGCTGTGACGGCACCAACAGCAAAACCGC
CACGTCCTACAAAACAGCCTACATACGTCGAAGGCTCATACGAAGCAAAC
CTCAGGGTAACCTCGAAAGATGTATATCATAAAAAGGGGGTAGAATGCCA
TGTTGCCGATGGTTCTCGTGGACGGATGCGCGTTCAGGACTTGAGCACGA
ACGATAGGAAATCAGATATCCGAGCCGTACACGGTCCAGATAACGCGTCA
GAACCGTGCGATGGCTCCTACGAATCAGCCTTCCGGAAGGAAAAGGTGAC
GCCGCAACATCCATCCAGGGCCAACTTGAGCGTTGTGGATGGTATAAATC
AATCGCACGCCACGCCCCCTTCGGCGTTTTCGTTTTCTGGGAACCGTCTG
ACGAAACGGCGTTCTATGCCAATGCATTTTGTGACAGCAAACTCTCCGAC
TGCTGAAGGCACCACAACATCGCAAACCGCCGAGAAGCATACAGTACAGG
GCAGCGCATTCGGCAATGCATCCACGGTAAGAAAAGCATATAGGGCACCA
TCAAGTTCTTCAAATAGCCCTGACGGAATACAACCTATTCTGTTGAGGAC
AAAAAGTGCAGTCAACGGGGACGCTAAACAGACAAAGCCAGGAAGTGCAT
TTCAGCAAGAAGGCTTGTACACGAAAACGAGAAGAAAGCCTCGCGACCCT
GGTGCGGCGAGTACAGGACTTCGTACATGCCGTCCTCCAAGGACTAATTT
GCAAGGCAATGTGGACCAAGATATGGGGATAAACCCGTCCCATGGGGTGA
ACAATGATGCACCCGCTGGAACAAGTTGCATGTCTGCGGAAGGCAGCATG
AAAAAGAAGCGCGAGAGGCGACCGCTGTGGGATAAGTAG
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Coding sequence (CDS) from alignment at tig00004441_pilon:978439..979827-

>Gchil7295.t1 ID=Gchil7295.t1|Name=Gchil7295.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1389bp|location=Sequence derived from alignment at tig00004441_pilon:978439..979827- (Gracilaria chilensis NLEC103_M9 male)
ATGGTTTTCATAGCGATTGGCGCGATAAAAGCCGCTAAAGCTGCGAAAAA
GGAGTACGACAAGGATAAGAAACGCTCAGAAATCATCACACCATTACACA
ACTCCCGTCGCAACGAGTTTGACAATGGTCCGTCATCAGCCTCTCCAGAT
TGGTGGAGCTCTGACCAGCCGCAAGATTCGGGGCCACAGCCACGGCAGGT
TTCACGCGATTCGTTTGGCGCTTGGAGTCGTGACCAACTTCGAGACCAAA
TCGCTGAACAACAGGCAAGGCAGGAGGAGTACGATTTCAGGTTTCGTGAA
CAACTTTCAAACTCTTCAGCATCTCTTGGTTCTATCGCGGTACCTTCTGC
TTCTCATTCACCAGCCGTTCCTGTCTCACAGACGCGCTCTGACTTGGACA
AAGCGGAACACAGTCACGGGAGTCTGAAGCAAATACTTCCGCCCACAATT
TTGCCGCCTTTATTAGAGAATGAAGAAGAATCAAAAGGGAAAATTCCGGA
TGACAGAAACCTCTCCGCTTCGGCTGTGACGGCACCAACAGCAAAACCGC
CACGTCCTACAAAACAGCCTACATACGTCGAAGGCTCATACGAAGCAAAC
CTCAGGGTAACCTCGAAAGATGTATATCATAAAAAGGGGGTAGAATGCCA
TGTTGCCGATGGTTCTCGTGGACGGATGCGCGTTCAGGACTTGAGCACGA
ACGATAGGAAATCAGATATCCGAGCCGTACACGGTCCAGATAACGCGTCA
GAACCGTGCGATGGCTCCTACGAATCAGCCTTCCGGAAGGAAAAGGTGAC
GCCGCAACATCCATCCAGGGCCAACTTGAGCGTTGTGGATGGTATAAATC
AATCGCACGCCACGCCCCCTTCGGCGTTTTCGTTTTCTGGGAACCGTCTG
ACGAAACGGCGTTCTATGCCAATGCATTTTGTGACAGCAAACTCTCCGAC
TGCTGAAGGCACCACAACATCGCAAACCGCCGAGAAGCATACAGTACAGG
GCAGCGCATTCGGCAATGCATCCACGGTAAGAAAAGCATATAGGGCACCA
TCAAGTTCTTCAAATAGCCCTGACGGAATACAACCTATTCTGTTGAGGAC
AAAAAGTGCAGTCAACGGGGACGCTAAACAGACAAAGCCAGGAAGTGCAT
TTCAGCAAGAAGGCTTGTACACGAAAACGAGAAGAAAGCCTCGCGACCCT
GGTGCGGCGAGTACAGGACTTCGTACATGCCGTCCTCCAAGGACTAATTT
GCAAGGCAATGTGGACCAAGATATGGGGATAAACCCGTCCCATGGGGTGA
ACAATGATGCACCCGCTGGAACAAGTTGCATGTCTGCGGAAGGCAGCATG
AAAAAGAAGCGCGAGAGGCGACCGCTGTGGGATAAGTAG
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