Gchil7265.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7265.t1
Unique NameGchil7265.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length546
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:907127..908764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7265Gchil7265Gracilaria chilensis NLEC103_M9 malegenetig00004441_pilon 907127..908764 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7265.t1.stop1Gchil7265.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004441_pilon 907127..907129 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7265.t1.CDS1Gchil7265.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004441_pilon 907127..908764 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7265.t1.exon1Gchil7265.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004441_pilon 907127..908764 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7265.t1.start1Gchil7265.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004441_pilon 908762..908764 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7265.t1Gchil7265.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004441_pilon 907127..908764 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7265.t1 ID=Gchil7265.t1|Name=Gchil7265.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=546bp
MPPSSTRLEALPSACIEKALVWLLGLSYGEHDDGAQRLSISRKLGEIINA
WVSGLLAADFPVEEVENTFCAFSKFMHSDIVQELVNWSAISVTDVDQLIH
IHWVRASQNMIDLPLPPAKPLETAIDSLSVALNLLDCIAAKENRRSAAAN
TAPGHLIFSAVRILISTTDENDQRSSKVRNLCDQSLSQLCRMRRLESKSQ
LLSSLLTQVAPLIRIAVKGDLSSFKAPYSVHHVAPTSHVLHYLLSEVGDN
KLIETVNEILPTLRDLVESVQESIRVQALHSMALLSSRLPLSAMEPIVTS
KSLQVALSWRDVPTSMVAIPLLATLLPKTRPIESRGEEFFTSVSKVIGTV
VHHMQSRSESSESDDQGLQALGETRAAIELSRFVPPLVQDLLMCRIDWIL
ALCTFLERIAILVRHGTLEAEDVTRTLAVLKESIKWAWLRVDSFRKNVFE
SCLSVLMETRRVPDSFLIQAAIRDMILQVAKCGQVERLIEMIQEVRACAK
DYSSLETAVELCKELEDIIAFEGEATFKTSIHAGSSVQRFFPELA*
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spliced messenger RNA

>Gchil7265.t1 ID=Gchil7265.t1|Name=Gchil7265.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1638bp|location=Sequence derived from alignment at tig00004441_pilon:907127..908764- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCCGAGTTCCACTAGGTTAGAGGCGCTTCCATCGGCCTGCATTGA
GAAGGCATTGGTCTGGCTTCTCGGTCTGTCTTATGGCGAACATGACGATG
GGGCACAACGTCTGTCTATTTCTCGCAAATTGGGTGAAATAATCAATGCA
TGGGTCAGTGGTCTTTTGGCTGCTGATTTCCCGGTTGAGGAGGTAGAGAA
CACATTTTGTGCCTTCTCTAAATTTATGCATTCAGACATTGTTCAAGAAC
TAGTCAATTGGTCTGCAATATCTGTCACCGATGTCGATCAACTCATCCAT
ATACACTGGGTTCGTGCGTCCCAGAACATGATCGATCTTCCTTTGCCTCC
AGCCAAGCCTTTGGAAACAGCTATCGATTCGTTGTCCGTCGCCCTGAATC
TTCTAGATTGCATTGCAGCAAAGGAAAATCGACGTTCTGCAGCTGCAAAT
ACAGCCCCTGGGCATCTCATTTTCTCAGCGGTACGTATCTTGATATCCAC
AACAGACGAAAACGACCAACGCAGTTCGAAGGTTCGTAACTTGTGTGATC
AATCACTCTCTCAATTGTGCCGAATGCGTCGGCTTGAAAGCAAATCCCAG
CTACTATCATCCCTCTTAACTCAGGTTGCACCTTTGATCCGCATTGCTGT
GAAAGGCGATCTCAGTTCCTTCAAAGCACCGTACAGCGTGCATCATGTAG
CTCCAACGTCACATGTGTTACACTATCTACTGAGTGAAGTGGGCGACAAC
AAGCTTATTGAGACTGTGAACGAGATCCTGCCGACATTGAGAGATCTAGT
TGAAAGTGTTCAGGAATCAATACGAGTCCAAGCATTGCATTCCATGGCTT
TGCTATCTTCTCGTCTACCTCTTTCCGCCATGGAACCAATAGTTACATCT
AAGTCGTTGCAAGTTGCTTTATCATGGCGCGATGTTCCAACATCGATGGT
TGCCATCCCACTGTTGGCCACTCTATTGCCGAAGACAAGACCAATAGAAT
CACGTGGGGAAGAATTCTTTACTTCAGTATCCAAGGTGATTGGCACTGTA
GTGCACCACATGCAAAGTCGTAGTGAGAGCTCTGAATCAGACGATCAGGG
CTTGCAAGCTCTAGGAGAGACGAGGGCTGCTATAGAATTATCAAGATTTG
TACCACCGTTGGTCCAAGACCTGCTAATGTGTCGTATTGATTGGATTTTG
GCCTTGTGTACTTTTCTTGAACGCATCGCAATCTTGGTGAGACATGGTAC
CCTAGAAGCAGAAGATGTTACGCGGACCCTCGCAGTTCTTAAAGAGTCAA
TCAAATGGGCTTGGCTTCGAGTGGATTCATTCAGGAAAAACGTGTTTGAA
AGCTGTCTGTCAGTACTTATGGAGACTAGAAGGGTCCCTGACTCCTTTTT
GATTCAGGCAGCCATTCGGGATATGATTTTACAGGTTGCAAAGTGTGGCC
AAGTAGAACGTTTGATAGAAATGATACAGGAAGTACGTGCATGTGCCAAG
GACTACAGCAGTCTGGAAACGGCAGTAGAGCTCTGCAAGGAGCTTGAGGA
TATTATCGCCTTCGAAGGCGAGGCAACTTTCAAAACTAGTATTCACGCCG
GATCTTCGGTCCAAAGGTTTTTTCCGGAGCTTGCGTAA
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protein sequence of Gchil7265.t1

>Gchil7265.t1 ID=Gchil7265.t1|Name=Gchil7265.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=546bp
MPPSSTRLEALPSACIEKALVWLLGLSYGEHDDGAQRLSISRKLGEIINA
WVSGLLAADFPVEEVENTFCAFSKFMHSDIVQELVNWSAISVTDVDQLIH
IHWVRASQNMIDLPLPPAKPLETAIDSLSVALNLLDCIAAKENRRSAAAN
TAPGHLIFSAVRILISTTDENDQRSSKVRNLCDQSLSQLCRMRRLESKSQ
LLSSLLTQVAPLIRIAVKGDLSSFKAPYSVHHVAPTSHVLHYLLSEVGDN
KLIETVNEILPTLRDLVESVQESIRVQALHSMALLSSRLPLSAMEPIVTS
KSLQVALSWRDVPTSMVAIPLLATLLPKTRPIESRGEEFFTSVSKVIGTV
VHHMQSRSESSESDDQGLQALGETRAAIELSRFVPPLVQDLLMCRIDWIL
ALCTFLERIAILVRHGTLEAEDVTRTLAVLKESIKWAWLRVDSFRKNVFE
SCLSVLMETRRVPDSFLIQAAIRDMILQVAKCGQVERLIEMIQEVRACAK
DYSSLETAVELCKELEDIIAFEGEATFKTSIHAGSSVQRFFPELA*
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mRNA from alignment at tig00004441_pilon:907127..908764-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7265.t1 ID=Gchil7265.t1|Name=Gchil7265.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1638bp|location=Sequence derived from alignment at tig00004441_pilon:907127..908764- (Gracilaria chilensis NLEC103_M9 male)
ATGCCGCCGAGTTCCACTAGGTTAGAGGCGCTTCCATCGGCCTGCATTGA
GAAGGCATTGGTCTGGCTTCTCGGTCTGTCTTATGGCGAACATGACGATG
GGGCACAACGTCTGTCTATTTCTCGCAAATTGGGTGAAATAATCAATGCA
TGGGTCAGTGGTCTTTTGGCTGCTGATTTCCCGGTTGAGGAGGTAGAGAA
CACATTTTGTGCCTTCTCTAAATTTATGCATTCAGACATTGTTCAAGAAC
TAGTCAATTGGTCTGCAATATCTGTCACCGATGTCGATCAACTCATCCAT
ATACACTGGGTTCGTGCGTCCCAGAACATGATCGATCTTCCTTTGCCTCC
AGCCAAGCCTTTGGAAACAGCTATCGATTCGTTGTCCGTCGCCCTGAATC
TTCTAGATTGCATTGCAGCAAAGGAAAATCGACGTTCTGCAGCTGCAAAT
ACAGCCCCTGGGCATCTCATTTTCTCAGCGGTACGTATCTTGATATCCAC
AACAGACGAAAACGACCAACGCAGTTCGAAGGTTCGTAACTTGTGTGATC
AATCACTCTCTCAATTGTGCCGAATGCGTCGGCTTGAAAGCAAATCCCAG
CTACTATCATCCCTCTTAACTCAGGTTGCACCTTTGATCCGCATTGCTGT
GAAAGGCGATCTCAGTTCCTTCAAAGCACCGTACAGCGTGCATCATGTAG
CTCCAACGTCACATGTGTTACACTATCTACTGAGTGAAGTGGGCGACAAC
AAGCTTATTGAGACTGTGAACGAGATCCTGCCGACATTGAGAGATCTAGT
TGAAAGTGTTCAGGAATCAATACGAGTCCAAGCATTGCATTCCATGGCTT
TGCTATCTTCTCGTCTACCTCTTTCCGCCATGGAACCAATAGTTACATCT
AAGTCGTTGCAAGTTGCTTTATCATGGCGCGATGTTCCAACATCGATGGT
TGCCATCCCACTGTTGGCCACTCTATTGCCGAAGACAAGACCAATAGAAT
CACGTGGGGAAGAATTCTTTACTTCAGTATCCAAGGTGATTGGCACTGTA
GTGCACCACATGCAAAGTCGTAGTGAGAGCTCTGAATCAGACGATCAGGG
CTTGCAAGCTCTAGGAGAGACGAGGGCTGCTATAGAATTATCAAGATTTG
TACCACCGTTGGTCCAAGACCTGCTAATGTGTCGTATTGATTGGATTTTG
GCCTTGTGTACTTTTCTTGAACGCATCGCAATCTTGGTGAGACATGGTAC
CCTAGAAGCAGAAGATGTTACGCGGACCCTCGCAGTTCTTAAAGAGTCAA
TCAAATGGGCTTGGCTTCGAGTGGATTCATTCAGGAAAAACGTGTTTGAA
AGCTGTCTGTCAGTACTTATGGAGACTAGAAGGGTCCCTGACTCCTTTTT
GATTCAGGCAGCCATTCGGGATATGATTTTACAGGTTGCAAAGTGTGGCC
AAGTAGAACGTTTGATAGAAATGATACAGGAAGTACGTGCATGTGCCAAG
GACTACAGCAGTCTGGAAACGGCAGTAGAGCTCTGCAAGGAGCTTGAGGA
TATTATCGCCTTCGAAGGCGAGGCAACTTTCAAAACTAGTATTCACGCCG
GATCTTCGGTCCAAAGGTTTTTTCCGGAGCTTGCGTAA
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Coding sequence (CDS) from alignment at tig00004441_pilon:907127..908764-

>Gchil7265.t1 ID=Gchil7265.t1|Name=Gchil7265.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1638bp|location=Sequence derived from alignment at tig00004441_pilon:907127..908764- (Gracilaria chilensis NLEC103_M9 male)
ATGCCGCCGAGTTCCACTAGGTTAGAGGCGCTTCCATCGGCCTGCATTGA
GAAGGCATTGGTCTGGCTTCTCGGTCTGTCTTATGGCGAACATGACGATG
GGGCACAACGTCTGTCTATTTCTCGCAAATTGGGTGAAATAATCAATGCA
TGGGTCAGTGGTCTTTTGGCTGCTGATTTCCCGGTTGAGGAGGTAGAGAA
CACATTTTGTGCCTTCTCTAAATTTATGCATTCAGACATTGTTCAAGAAC
TAGTCAATTGGTCTGCAATATCTGTCACCGATGTCGATCAACTCATCCAT
ATACACTGGGTTCGTGCGTCCCAGAACATGATCGATCTTCCTTTGCCTCC
AGCCAAGCCTTTGGAAACAGCTATCGATTCGTTGTCCGTCGCCCTGAATC
TTCTAGATTGCATTGCAGCAAAGGAAAATCGACGTTCTGCAGCTGCAAAT
ACAGCCCCTGGGCATCTCATTTTCTCAGCGGTACGTATCTTGATATCCAC
AACAGACGAAAACGACCAACGCAGTTCGAAGGTTCGTAACTTGTGTGATC
AATCACTCTCTCAATTGTGCCGAATGCGTCGGCTTGAAAGCAAATCCCAG
CTACTATCATCCCTCTTAACTCAGGTTGCACCTTTGATCCGCATTGCTGT
GAAAGGCGATCTCAGTTCCTTCAAAGCACCGTACAGCGTGCATCATGTAG
CTCCAACGTCACATGTGTTACACTATCTACTGAGTGAAGTGGGCGACAAC
AAGCTTATTGAGACTGTGAACGAGATCCTGCCGACATTGAGAGATCTAGT
TGAAAGTGTTCAGGAATCAATACGAGTCCAAGCATTGCATTCCATGGCTT
TGCTATCTTCTCGTCTACCTCTTTCCGCCATGGAACCAATAGTTACATCT
AAGTCGTTGCAAGTTGCTTTATCATGGCGCGATGTTCCAACATCGATGGT
TGCCATCCCACTGTTGGCCACTCTATTGCCGAAGACAAGACCAATAGAAT
CACGTGGGGAAGAATTCTTTACTTCAGTATCCAAGGTGATTGGCACTGTA
GTGCACCACATGCAAAGTCGTAGTGAGAGCTCTGAATCAGACGATCAGGG
CTTGCAAGCTCTAGGAGAGACGAGGGCTGCTATAGAATTATCAAGATTTG
TACCACCGTTGGTCCAAGACCTGCTAATGTGTCGTATTGATTGGATTTTG
GCCTTGTGTACTTTTCTTGAACGCATCGCAATCTTGGTGAGACATGGTAC
CCTAGAAGCAGAAGATGTTACGCGGACCCTCGCAGTTCTTAAAGAGTCAA
TCAAATGGGCTTGGCTTCGAGTGGATTCATTCAGGAAAAACGTGTTTGAA
AGCTGTCTGTCAGTACTTATGGAGACTAGAAGGGTCCCTGACTCCTTTTT
GATTCAGGCAGCCATTCGGGATATGATTTTACAGGTTGCAAAGTGTGGCC
AAGTAGAACGTTTGATAGAAATGATACAGGAAGTACGTGCATGTGCCAAG
GACTACAGCAGTCTGGAAACGGCAGTAGAGCTCTGCAAGGAGCTTGAGGA
TATTATCGCCTTCGAAGGCGAGGCAACTTTCAAAACTAGTATTCACGCCG
GATCTTCGGTCCAAAGGTTTTTTCCGGAGCTTGCGTAA
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