Gchil7151.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7151.t1
Unique NameGchil7151.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length601
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:369275..371077 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7151Gchil7151Gracilaria chilensis NLEC103_M9 malegenetig00004441_pilon 369275..371077 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7151.t1.stop1Gchil7151.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004441_pilon 369275..369277 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7151.t1.CDS1Gchil7151.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004441_pilon 369275..371077 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7151.t1.exon1Gchil7151.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004441_pilon 369275..371077 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7151.t1.start1Gchil7151.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004441_pilon 371075..371077 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7151.t1Gchil7151.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004441_pilon 369275..371077 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7151.t1 ID=Gchil7151.t1|Name=Gchil7151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=601bp
MPSPPSDVDHFQEASRKSWSNGKKLTRVEQNVPLAVEVDKEDDHSSSSVA
VTTKFVGEDVTHAEHQDCIYETVDEAAPPSLDFMSPLVLALSSSPATEKT
ETMSRIDSPIHLPPPLPGSQGEMLVHEDHMKDSESDRDSVDRDSVIGARR
VLSTSERSRSDATNSPLAFEKSPSLTLQNPSLVEDYDSDQMIVPIRAMKS
EKTDKNLEAPNYLELLKSANESSPPMPNHSTPVGCVEAQLTEKDVRCAIE
PVNDENDVLWSRAARIYEERKDPDDLSSIDREIKAYLHEKSLIKEGSRTP
FLNTRERSGLGTSPTQAVQHASIFRSDEVHRSRENRLSKGIPLQNVGRSQ
STAEKPIGDWTEITPYEANKESRLSRRHLSDLSFGVRERQKDMLPKELIP
DDFRTDDEFTDLDEPVVDRLGGKKWKRGIIAACKDVSECRKMVANLWKRR
RNGTPIEEGLSGPQRMYRVDSHRSQTRRSGPHEIGVKFDSTLSQDTVFRL
LDRLCPDIGVSVVARKPNHKLKVTVSIPGQNRPLLLSIHLTRQSHSRGTT
VVLARSKDDQSGAARKHIEITGLSLRQKLEENLEFIEDSFSSRLLEDSRL
*
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spliced messenger RNA

>Gchil7151.t1 ID=Gchil7151.t1|Name=Gchil7151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1803bp|location=Sequence derived from alignment at tig00004441_pilon:369275..371077- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGAGTCCTCCTTCCGATGTGGATCATTTTCAAGAAGCATCTCGAAA
GTCATGGTCAAACGGAAAAAAGCTAACTCGAGTCGAACAGAACGTACCAC
TGGCCGTTGAGGTGGACAAGGAAGATGATCATAGCTCATCTAGTGTCGCT
GTGACCACCAAGTTCGTAGGGGAAGATGTTACCCATGCAGAGCATCAGGA
CTGTATATATGAAACGGTGGACGAAGCTGCGCCCCCCTCCCTCGATTTCA
TGAGCCCGCTCGTCCTGGCACTTTCGTCAAGCCCTGCAACAGAAAAGACG
GAAACCATGTCTCGGATAGATTCACCGATTCATCTACCTCCCCCTTTGCC
TGGTTCTCAGGGGGAGATGCTCGTACATGAAGATCATATGAAAGATTCTG
AAAGCGACCGTGATAGCGTTGACCGAGATTCTGTCATAGGCGCGAGAAGA
GTGCTATCGACTTCAGAAAGATCCAGAAGCGACGCCACCAATTCCCCTTT
GGCCTTCGAGAAGTCCCCTTCGTTAACATTGCAGAATCCTTCGTTAGTTG
AGGACTATGACAGCGACCAAATGATTGTACCGATCCGAGCTATGAAATCA
GAGAAGACTGACAAGAACCTAGAAGCGCCGAACTATCTGGAACTTCTTAA
AAGTGCGAATGAGTCTAGTCCTCCTATGCCGAATCATTCAACCCCTGTTG
GCTGTGTAGAAGCACAACTAACTGAAAAGGATGTTAGATGTGCGATTGAA
CCCGTTAATGATGAAAATGATGTCCTTTGGTCAAGAGCTGCACGTATATA
TGAAGAAAGGAAAGATCCGGATGATTTATCGAGCATAGACAGGGAAATAA
AGGCCTATTTGCACGAGAAATCCCTGATAAAAGAGGGGTCGCGAACGCCC
TTTTTAAACACCCGAGAAAGATCGGGGCTTGGAACATCTCCCACACAGGC
CGTTCAGCACGCCAGCATTTTTCGAAGTGATGAGGTGCATCGAAGTCGCG
AGAATAGGCTTAGCAAAGGTATTCCGTTGCAGAACGTTGGTCGCTCGCAA
AGCACTGCTGAAAAACCGATCGGTGATTGGACCGAGATCACGCCCTACGA
AGCAAATAAGGAGTCACGACTGAGCCGAAGACATTTGAGTGATCTCTCAT
TTGGAGTGAGAGAAAGACAGAAGGACATGTTACCGAAAGAACTCATACCA
GACGATTTTCGAACAGATGATGAGTTCACGGACTTAGACGAACCGGTCGT
TGACAGACTCGGTGGCAAAAAGTGGAAGAGAGGTATCATTGCAGCTTGCA
AAGATGTTTCAGAATGTCGAAAAATGGTAGCAAATCTTTGGAAGAGAAGA
AGGAATGGCACCCCAATAGAAGAAGGACTATCTGGTCCCCAAAGAATGTA
TCGTGTTGACTCGCATCGAAGTCAAACTCGTCGCAGCGGTCCTCATGAAA
TTGGTGTGAAATTCGACTCGACACTATCCCAGGACACGGTATTCAGGCTT
TTGGACCGACTGTGTCCCGATATAGGAGTTTCTGTTGTTGCCCGAAAGCC
TAATCACAAACTTAAAGTCACCGTTTCTATCCCAGGGCAGAACAGACCTC
TTCTGCTTTCGATTCACTTGACAAGGCAATCGCACTCTCGAGGAACAACC
GTTGTGTTAGCTCGTTCAAAAGACGACCAATCTGGCGCCGCTCGCAAACA
TATTGAGATTACCGGGCTTTCACTCCGCCAAAAACTTGAAGAAAATCTTG
AGTTCATTGAAGATTCCTTTTCTTCTCGTCTATTGGAAGACTCACGCTTG
TGA
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protein sequence of Gchil7151.t1

>Gchil7151.t1 ID=Gchil7151.t1|Name=Gchil7151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=601bp
MPSPPSDVDHFQEASRKSWSNGKKLTRVEQNVPLAVEVDKEDDHSSSSVA
VTTKFVGEDVTHAEHQDCIYETVDEAAPPSLDFMSPLVLALSSSPATEKT
ETMSRIDSPIHLPPPLPGSQGEMLVHEDHMKDSESDRDSVDRDSVIGARR
VLSTSERSRSDATNSPLAFEKSPSLTLQNPSLVEDYDSDQMIVPIRAMKS
EKTDKNLEAPNYLELLKSANESSPPMPNHSTPVGCVEAQLTEKDVRCAIE
PVNDENDVLWSRAARIYEERKDPDDLSSIDREIKAYLHEKSLIKEGSRTP
FLNTRERSGLGTSPTQAVQHASIFRSDEVHRSRENRLSKGIPLQNVGRSQ
STAEKPIGDWTEITPYEANKESRLSRRHLSDLSFGVRERQKDMLPKELIP
DDFRTDDEFTDLDEPVVDRLGGKKWKRGIIAACKDVSECRKMVANLWKRR
RNGTPIEEGLSGPQRMYRVDSHRSQTRRSGPHEIGVKFDSTLSQDTVFRL
LDRLCPDIGVSVVARKPNHKLKVTVSIPGQNRPLLLSIHLTRQSHSRGTT
VVLARSKDDQSGAARKHIEITGLSLRQKLEENLEFIEDSFSSRLLEDSRL
*
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mRNA from alignment at tig00004441_pilon:369275..371077-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7151.t1 ID=Gchil7151.t1|Name=Gchil7151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1803bp|location=Sequence derived from alignment at tig00004441_pilon:369275..371077- (Gracilaria chilensis NLEC103_M9 male)
ATGCCGAGTCCTCCTTCCGATGTGGATCATTTTCAAGAAGCATCTCGAAA
GTCATGGTCAAACGGAAAAAAGCTAACTCGAGTCGAACAGAACGTACCAC
TGGCCGTTGAGGTGGACAAGGAAGATGATCATAGCTCATCTAGTGTCGCT
GTGACCACCAAGTTCGTAGGGGAAGATGTTACCCATGCAGAGCATCAGGA
CTGTATATATGAAACGGTGGACGAAGCTGCGCCCCCCTCCCTCGATTTCA
TGAGCCCGCTCGTCCTGGCACTTTCGTCAAGCCCTGCAACAGAAAAGACG
GAAACCATGTCTCGGATAGATTCACCGATTCATCTACCTCCCCCTTTGCC
TGGTTCTCAGGGGGAGATGCTCGTACATGAAGATCATATGAAAGATTCTG
AAAGCGACCGTGATAGCGTTGACCGAGATTCTGTCATAGGCGCGAGAAGA
GTGCTATCGACTTCAGAAAGATCCAGAAGCGACGCCACCAATTCCCCTTT
GGCCTTCGAGAAGTCCCCTTCGTTAACATTGCAGAATCCTTCGTTAGTTG
AGGACTATGACAGCGACCAAATGATTGTACCGATCCGAGCTATGAAATCA
GAGAAGACTGACAAGAACCTAGAAGCGCCGAACTATCTGGAACTTCTTAA
AAGTGCGAATGAGTCTAGTCCTCCTATGCCGAATCATTCAACCCCTGTTG
GCTGTGTAGAAGCACAACTAACTGAAAAGGATGTTAGATGTGCGATTGAA
CCCGTTAATGATGAAAATGATGTCCTTTGGTCAAGAGCTGCACGTATATA
TGAAGAAAGGAAAGATCCGGATGATTTATCGAGCATAGACAGGGAAATAA
AGGCCTATTTGCACGAGAAATCCCTGATAAAAGAGGGGTCGCGAACGCCC
TTTTTAAACACCCGAGAAAGATCGGGGCTTGGAACATCTCCCACACAGGC
CGTTCAGCACGCCAGCATTTTTCGAAGTGATGAGGTGCATCGAAGTCGCG
AGAATAGGCTTAGCAAAGGTATTCCGTTGCAGAACGTTGGTCGCTCGCAA
AGCACTGCTGAAAAACCGATCGGTGATTGGACCGAGATCACGCCCTACGA
AGCAAATAAGGAGTCACGACTGAGCCGAAGACATTTGAGTGATCTCTCAT
TTGGAGTGAGAGAAAGACAGAAGGACATGTTACCGAAAGAACTCATACCA
GACGATTTTCGAACAGATGATGAGTTCACGGACTTAGACGAACCGGTCGT
TGACAGACTCGGTGGCAAAAAGTGGAAGAGAGGTATCATTGCAGCTTGCA
AAGATGTTTCAGAATGTCGAAAAATGGTAGCAAATCTTTGGAAGAGAAGA
AGGAATGGCACCCCAATAGAAGAAGGACTATCTGGTCCCCAAAGAATGTA
TCGTGTTGACTCGCATCGAAGTCAAACTCGTCGCAGCGGTCCTCATGAAA
TTGGTGTGAAATTCGACTCGACACTATCCCAGGACACGGTATTCAGGCTT
TTGGACCGACTGTGTCCCGATATAGGAGTTTCTGTTGTTGCCCGAAAGCC
TAATCACAAACTTAAAGTCACCGTTTCTATCCCAGGGCAGAACAGACCTC
TTCTGCTTTCGATTCACTTGACAAGGCAATCGCACTCTCGAGGAACAACC
GTTGTGTTAGCTCGTTCAAAAGACGACCAATCTGGCGCCGCTCGCAAACA
TATTGAGATTACCGGGCTTTCACTCCGCCAAAAACTTGAAGAAAATCTTG
AGTTCATTGAAGATTCCTTTTCTTCTCGTCTATTGGAAGACTCACGCTTG
TGA
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Coding sequence (CDS) from alignment at tig00004441_pilon:369275..371077-

>Gchil7151.t1 ID=Gchil7151.t1|Name=Gchil7151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1803bp|location=Sequence derived from alignment at tig00004441_pilon:369275..371077- (Gracilaria chilensis NLEC103_M9 male)
ATGCCGAGTCCTCCTTCCGATGTGGATCATTTTCAAGAAGCATCTCGAAA
GTCATGGTCAAACGGAAAAAAGCTAACTCGAGTCGAACAGAACGTACCAC
TGGCCGTTGAGGTGGACAAGGAAGATGATCATAGCTCATCTAGTGTCGCT
GTGACCACCAAGTTCGTAGGGGAAGATGTTACCCATGCAGAGCATCAGGA
CTGTATATATGAAACGGTGGACGAAGCTGCGCCCCCCTCCCTCGATTTCA
TGAGCCCGCTCGTCCTGGCACTTTCGTCAAGCCCTGCAACAGAAAAGACG
GAAACCATGTCTCGGATAGATTCACCGATTCATCTACCTCCCCCTTTGCC
TGGTTCTCAGGGGGAGATGCTCGTACATGAAGATCATATGAAAGATTCTG
AAAGCGACCGTGATAGCGTTGACCGAGATTCTGTCATAGGCGCGAGAAGA
GTGCTATCGACTTCAGAAAGATCCAGAAGCGACGCCACCAATTCCCCTTT
GGCCTTCGAGAAGTCCCCTTCGTTAACATTGCAGAATCCTTCGTTAGTTG
AGGACTATGACAGCGACCAAATGATTGTACCGATCCGAGCTATGAAATCA
GAGAAGACTGACAAGAACCTAGAAGCGCCGAACTATCTGGAACTTCTTAA
AAGTGCGAATGAGTCTAGTCCTCCTATGCCGAATCATTCAACCCCTGTTG
GCTGTGTAGAAGCACAACTAACTGAAAAGGATGTTAGATGTGCGATTGAA
CCCGTTAATGATGAAAATGATGTCCTTTGGTCAAGAGCTGCACGTATATA
TGAAGAAAGGAAAGATCCGGATGATTTATCGAGCATAGACAGGGAAATAA
AGGCCTATTTGCACGAGAAATCCCTGATAAAAGAGGGGTCGCGAACGCCC
TTTTTAAACACCCGAGAAAGATCGGGGCTTGGAACATCTCCCACACAGGC
CGTTCAGCACGCCAGCATTTTTCGAAGTGATGAGGTGCATCGAAGTCGCG
AGAATAGGCTTAGCAAAGGTATTCCGTTGCAGAACGTTGGTCGCTCGCAA
AGCACTGCTGAAAAACCGATCGGTGATTGGACCGAGATCACGCCCTACGA
AGCAAATAAGGAGTCACGACTGAGCCGAAGACATTTGAGTGATCTCTCAT
TTGGAGTGAGAGAAAGACAGAAGGACATGTTACCGAAAGAACTCATACCA
GACGATTTTCGAACAGATGATGAGTTCACGGACTTAGACGAACCGGTCGT
TGACAGACTCGGTGGCAAAAAGTGGAAGAGAGGTATCATTGCAGCTTGCA
AAGATGTTTCAGAATGTCGAAAAATGGTAGCAAATCTTTGGAAGAGAAGA
AGGAATGGCACCCCAATAGAAGAAGGACTATCTGGTCCCCAAAGAATGTA
TCGTGTTGACTCGCATCGAAGTCAAACTCGTCGCAGCGGTCCTCATGAAA
TTGGTGTGAAATTCGACTCGACACTATCCCAGGACACGGTATTCAGGCTT
TTGGACCGACTGTGTCCCGATATAGGAGTTTCTGTTGTTGCCCGAAAGCC
TAATCACAAACTTAAAGTCACCGTTTCTATCCCAGGGCAGAACAGACCTC
TTCTGCTTTCGATTCACTTGACAAGGCAATCGCACTCTCGAGGAACAACC
GTTGTGTTAGCTCGTTCAAAAGACGACCAATCTGGCGCCGCTCGCAAACA
TATTGAGATTACCGGGCTTTCACTCCGCCAAAAACTTGAAGAAAATCTTG
AGTTCATTGAAGATTCCTTTTCTTCTCGTCTATTGGAAGACTCACGCTTG
TGA
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