Gchil656.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil656.t1
Unique Name	Gchil656.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	640

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004380_pilon	contig	tig00004380_pilon:760596..762515 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	3218.PP1S154_79V6.1
Preferred name	ASA1
PFAMs	Anth_synt_I_N,Chorismate_bind
Max annot lvl	35493\|Streptophyta
KEGG rclass	RC00010,RC02148,RC02414
KEGG ko	ko:K01657
KEGG Reaction	R00985,R00986
KEGG Pathway	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025
KEGG Module	M00023
GOs	GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009507,GO:0009536,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494
Evalue	7.49e-189
EggNOG OGs	COG0147@1\|root,KOG1223@2759\|Eukaryota,37PW6@33090\|Viridiplantae,3G7PU@35493\|Streptophyta
EC	4.1.3.27
Description	Anthranilate synthase
COG category	E
BRITE	ko00000,ko00001,ko00002,ko01000

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil656	Gchil656	Gracilaria chilensis NLEC103_M9 male	gene	tig00004380_pilon 760596..762515 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil656.t1.stop1	Gchil656.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004380_pilon 760596..760598 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil656.t1.CDS1	Gchil656.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004380_pilon 760596..762515 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil656.t1.exon1	Gchil656.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004380_pilon 760596..762515 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil656.t1.start1	Gchil656.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004380_pilon 762513..762515 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil656.t1	Gchil656.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004380_pilon 760596..762515 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004380_pilon:760596..762515-
coding sequence from alignment at tig00004380_pilon:760596..762515-

mRNA sequence

>Gchil656.t1 ID=Gchil656.t1|Name=Gchil656.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=640bp
MPPDAPSSRVALSSPSLYSRRPHPLSLRIRFLFQSMKPSHSAFVFSHPFL
SGTAANTLSSPRPRPRPPSSFHPACSPRAALSNPPPRVAGGGTTPAADNF
HRYDGKCRQDFIRLASDPNVRLVPIWRKLFADLLTPVVVYRCLVSENEPN
TPSFLLESVHTGERIGRYSLIGARPVREITAFQKEVTVTSHENGHPEHST
FTVDDPWEFMRQMTQQMKPVDVKNLPGGHSLFSGGWVGFGGYDTMRYAEL
KSLPFTAAPADDRGLPDLHFGLYRDVIAFDHVAKVVYVIHWTDLNEIGDR
SESTIAQLFDSGVRHVDQLADRVFSANSQSSLQRGRVTLNTDAAAKQTCE
SNMTKEQFMAALEKIKYYISIGDTFQTVFSQRFERWSKIDPFSVYRALRI
INPSPYMIYMQSRGCHLVASSPEILTHVESGILTNRPLAGTRRRGTSKEE
DELLMKELLADQKDRSEHMMLVDLGRNDVGRVSEYGTVKPEKLMQVEKYS
HVMHISSTVTGKLRKGLTSWDALRSTLPAGTISGAPKIRSMQIIDELEPT
KRGPYGGGIGYISFHDTMNMALALRTMVVPSETHMNEDGQREWQYFLQAG
AGIVHESDPEAEYTETLNKAMALSRAIDLAENAFCPGEL*

spliced messenger RNA

>Gchil656.t1 ID=Gchil656.t1|Name=Gchil656.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1920bp|location=Sequence derived from alignment at tig00004380_pilon:760596..762515- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCACCCGATGCCCCGTCAAGTCGAGTAGCGCTGTCGTCTCCAAGCTT
GTACAGTCGTCGCCCTCATCCACTTTCGCTTCGCATCCGCTTTCTATTCC
AGTCAATGAAACCGTCACATTCGGCTTTCGTCTTTTCTCATCCCTTCCTG
TCAGGAACCGCCGCCAACACTCTCTCGAGCCCTCGTCCTCGTCCTCGTCC
TCCCTCCTCGTTTCATCCCGCATGTAGTCCGCGCGCCGCTCTGAGTAATC
CTCCTCCACGCGTTGCTGGTGGTGGAACAACTCCCGCAGCCGACAACTTT
CACAGATACGATGGAAAATGCCGCCAAGATTTCATCCGACTAGCATCTGA
TCCTAACGTACGTCTCGTGCCTATATGGAGAAAGCTTTTTGCTGATCTCC
TCACACCTGTCGTTGTGTACCGCTGTCTGGTTTCTGAGAATGAACCCAAT
ACCCCCTCATTTTTGCTGGAGAGCGTGCATACCGGTGAGCGTATCGGTCG
ATACAGTCTTATTGGCGCGCGGCCTGTCCGGGAGATCACTGCTTTCCAGA
AAGAGGTCACGGTTACCTCTCATGAGAATGGACACCCTGAACACTCTACG
TTTACTGTAGATGACCCATGGGAGTTTATGCGACAAATGACCCAACAAAT
GAAGCCCGTCGATGTGAAAAACTTGCCCGGCGGACACTCCCTGTTTAGTG
GGGGCTGGGTCGGCTTCGGTGGATACGATACCATGCGCTACGCGGAGCTC
AAATCTTTGCCTTTCACTGCCGCCCCAGCAGATGACAGAGGCTTACCAGA
CCTTCATTTTGGCCTGTACCGAGACGTAATAGCCTTCGACCATGTTGCCA
AGGTGGTATATGTCATTCATTGGACCGATTTAAATGAGATTGGTGACCGC
TCTGAAAGTACCATTGCACAGCTGTTCGACAGCGGTGTGCGACATGTAGA
CCAGCTTGCGGATCGAGTGTTTAGCGCCAATTCCCAGTCGTCACTCCAGC
GCGGCCGTGTCACGCTCAATACCGATGCTGCCGCAAAGCAAACTTGTGAG
AGCAACATGACCAAGGAGCAGTTTATGGCGGCGCTTGAGAAGATTAAGTA
TTATATATCGATTGGTGACACTTTTCAGACTGTCTTCTCTCAGAGATTTG
AGCGTTGGAGCAAAATAGATCCTTTCTCGGTATATAGAGCACTGCGAATA
ATCAATCCTTCCCCATACATGATTTATATGCAGTCTCGAGGATGTCATCT
TGTCGCGTCTTCTCCAGAAATCCTGACGCATGTGGAAAGCGGAATCCTCA
CTAACCGTCCACTTGCCGGAACGAGAAGACGAGGAACCTCGAAAGAAGAA
GACGAGTTGCTGATGAAGGAGTTGTTGGCAGATCAGAAAGATCGCTCGGA
GCATATGATGTTGGTGGACCTAGGTCGGAATGACGTCGGGAGAGTCTCGG
AGTATGGAACGGTAAAGCCTGAGAAACTGATGCAAGTGGAGAAATATTCG
CATGTAATGCATATCAGTAGCACAGTGACCGGTAAGTTAAGAAAAGGGTT
GACGTCATGGGATGCTCTGCGATCAACACTCCCAGCTGGTACGATAAGTG
GCGCACCGAAAATCCGTTCGATGCAGATAATAGATGAACTGGAACCTACA
AAAAGAGGACCGTATGGTGGTGGTATTGGATACATCTCTTTCCACGATAC
TATGAATATGGCACTTGCGCTGCGTACTATGGTTGTTCCAAGTGAGACTC
ATATGAATGAAGATGGCCAAAGAGAATGGCAATACTTTTTACAGGCTGGA
GCTGGGATCGTTCATGAATCGGATCCAGAGGCAGAATACACGGAAACTTT
GAACAAGGCTATGGCGCTTAGCAGAGCAATTGACCTAGCTGAAAATGCAT
TCTGTCCTGGGGAGTTGTAA

protein sequence of Gchil656.t1

>Gchil656.t1 ID=Gchil656.t1|Name=Gchil656.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=640bp
MPPDAPSSRVALSSPSLYSRRPHPLSLRIRFLFQSMKPSHSAFVFSHPFL
SGTAANTLSSPRPRPRPPSSFHPACSPRAALSNPPPRVAGGGTTPAADNF
HRYDGKCRQDFIRLASDPNVRLVPIWRKLFADLLTPVVVYRCLVSENEPN
TPSFLLESVHTGERIGRYSLIGARPVREITAFQKEVTVTSHENGHPEHST
FTVDDPWEFMRQMTQQMKPVDVKNLPGGHSLFSGGWVGFGGYDTMRYAEL
KSLPFTAAPADDRGLPDLHFGLYRDVIAFDHVAKVVYVIHWTDLNEIGDR
SESTIAQLFDSGVRHVDQLADRVFSANSQSSLQRGRVTLNTDAAAKQTCE
SNMTKEQFMAALEKIKYYISIGDTFQTVFSQRFERWSKIDPFSVYRALRI
INPSPYMIYMQSRGCHLVASSPEILTHVESGILTNRPLAGTRRRGTSKEE
DELLMKELLADQKDRSEHMMLVDLGRNDVGRVSEYGTVKPEKLMQVEKYS
HVMHISSTVTGKLRKGLTSWDALRSTLPAGTISGAPKIRSMQIIDELEPT
KRGPYGGGIGYISFHDTMNMALALRTMVVPSETHMNEDGQREWQYFLQAG
AGIVHESDPEAEYTETLNKAMALSRAIDLAENAFCPGEL*

mRNA from alignment at tig00004380_pilon:760596..762515-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil656.t1 ID=Gchil656.t1|Name=Gchil656.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1920bp|location=Sequence derived from alignment at tig00004380_pilon:760596..762515- (Gracilaria chilensis NLEC103_M9 male)
ATGCCACCCGATGCCCCGTCAAGTCGAGTAGCGCTGTCGTCTCCAAGCTT
GTACAGTCGTCGCCCTCATCCACTTTCGCTTCGCATCCGCTTTCTATTCC
AGTCAATGAAACCGTCACATTCGGCTTTCGTCTTTTCTCATCCCTTCCTG
TCAGGAACCGCCGCCAACACTCTCTCGAGCCCTCGTCCTCGTCCTCGTCC
TCCCTCCTCGTTTCATCCCGCATGTAGTCCGCGCGCCGCTCTGAGTAATC
CTCCTCCACGCGTTGCTGGTGGTGGAACAACTCCCGCAGCCGACAACTTT
CACAGATACGATGGAAAATGCCGCCAAGATTTCATCCGACTAGCATCTGA
TCCTAACGTACGTCTCGTGCCTATATGGAGAAAGCTTTTTGCTGATCTCC
TCACACCTGTCGTTGTGTACCGCTGTCTGGTTTCTGAGAATGAACCCAAT
ACCCCCTCATTTTTGCTGGAGAGCGTGCATACCGGTGAGCGTATCGGTCG
ATACAGTCTTATTGGCGCGCGGCCTGTCCGGGAGATCACTGCTTTCCAGA
AAGAGGTCACGGTTACCTCTCATGAGAATGGACACCCTGAACACTCTACG
TTTACTGTAGATGACCCATGGGAGTTTATGCGACAAATGACCCAACAAAT
GAAGCCCGTCGATGTGAAAAACTTGCCCGGCGGACACTCCCTGTTTAGTG
GGGGCTGGGTCGGCTTCGGTGGATACGATACCATGCGCTACGCGGAGCTC
AAATCTTTGCCTTTCACTGCCGCCCCAGCAGATGACAGAGGCTTACCAGA
CCTTCATTTTGGCCTGTACCGAGACGTAATAGCCTTCGACCATGTTGCCA
AGGTGGTATATGTCATTCATTGGACCGATTTAAATGAGATTGGTGACCGC
TCTGAAAGTACCATTGCACAGCTGTTCGACAGCGGTGTGCGACATGTAGA
CCAGCTTGCGGATCGAGTGTTTAGCGCCAATTCCCAGTCGTCACTCCAGC
GCGGCCGTGTCACGCTCAATACCGATGCTGCCGCAAAGCAAACTTGTGAG
AGCAACATGACCAAGGAGCAGTTTATGGCGGCGCTTGAGAAGATTAAGTA
TTATATATCGATTGGTGACACTTTTCAGACTGTCTTCTCTCAGAGATTTG
AGCGTTGGAGCAAAATAGATCCTTTCTCGGTATATAGAGCACTGCGAATA
ATCAATCCTTCCCCATACATGATTTATATGCAGTCTCGAGGATGTCATCT
TGTCGCGTCTTCTCCAGAAATCCTGACGCATGTGGAAAGCGGAATCCTCA
CTAACCGTCCACTTGCCGGAACGAGAAGACGAGGAACCTCGAAAGAAGAA
GACGAGTTGCTGATGAAGGAGTTGTTGGCAGATCAGAAAGATCGCTCGGA
GCATATGATGTTGGTGGACCTAGGTCGGAATGACGTCGGGAGAGTCTCGG
AGTATGGAACGGTAAAGCCTGAGAAACTGATGCAAGTGGAGAAATATTCG
CATGTAATGCATATCAGTAGCACAGTGACCGGTAAGTTAAGAAAAGGGTT
GACGTCATGGGATGCTCTGCGATCAACACTCCCAGCTGGTACGATAAGTG
GCGCACCGAAAATCCGTTCGATGCAGATAATAGATGAACTGGAACCTACA
AAAAGAGGACCGTATGGTGGTGGTATTGGATACATCTCTTTCCACGATAC
TATGAATATGGCACTTGCGCTGCGTACTATGGTTGTTCCAAGTGAGACTC
ATATGAATGAAGATGGCCAAAGAGAATGGCAATACTTTTTACAGGCTGGA
GCTGGGATCGTTCATGAATCGGATCCAGAGGCAGAATACACGGAAACTTT
GAACAAGGCTATGGCGCTTAGCAGAGCAATTGACCTAGCTGAAAATGCAT
TCTGTCCTGGGGAGTTGTAA

Coding sequence (CDS) from alignment at tig00004380_pilon:760596..762515-

>Gchil656.t1 ID=Gchil656.t1|Name=Gchil656.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1920bp|location=Sequence derived from alignment at tig00004380_pilon:760596..762515- (Gracilaria chilensis NLEC103_M9 male)
ATGCCACCCGATGCCCCGTCAAGTCGAGTAGCGCTGTCGTCTCCAAGCTT
GTACAGTCGTCGCCCTCATCCACTTTCGCTTCGCATCCGCTTTCTATTCC
AGTCAATGAAACCGTCACATTCGGCTTTCGTCTTTTCTCATCCCTTCCTG
TCAGGAACCGCCGCCAACACTCTCTCGAGCCCTCGTCCTCGTCCTCGTCC
TCCCTCCTCGTTTCATCCCGCATGTAGTCCGCGCGCCGCTCTGAGTAATC
CTCCTCCACGCGTTGCTGGTGGTGGAACAACTCCCGCAGCCGACAACTTT
CACAGATACGATGGAAAATGCCGCCAAGATTTCATCCGACTAGCATCTGA
TCCTAACGTACGTCTCGTGCCTATATGGAGAAAGCTTTTTGCTGATCTCC
TCACACCTGTCGTTGTGTACCGCTGTCTGGTTTCTGAGAATGAACCCAAT
ACCCCCTCATTTTTGCTGGAGAGCGTGCATACCGGTGAGCGTATCGGTCG
ATACAGTCTTATTGGCGCGCGGCCTGTCCGGGAGATCACTGCTTTCCAGA
AAGAGGTCACGGTTACCTCTCATGAGAATGGACACCCTGAACACTCTACG
TTTACTGTAGATGACCCATGGGAGTTTATGCGACAAATGACCCAACAAAT
GAAGCCCGTCGATGTGAAAAACTTGCCCGGCGGACACTCCCTGTTTAGTG
GGGGCTGGGTCGGCTTCGGTGGATACGATACCATGCGCTACGCGGAGCTC
AAATCTTTGCCTTTCACTGCCGCCCCAGCAGATGACAGAGGCTTACCAGA
CCTTCATTTTGGCCTGTACCGAGACGTAATAGCCTTCGACCATGTTGCCA
AGGTGGTATATGTCATTCATTGGACCGATTTAAATGAGATTGGTGACCGC
TCTGAAAGTACCATTGCACAGCTGTTCGACAGCGGTGTGCGACATGTAGA
CCAGCTTGCGGATCGAGTGTTTAGCGCCAATTCCCAGTCGTCACTCCAGC
GCGGCCGTGTCACGCTCAATACCGATGCTGCCGCAAAGCAAACTTGTGAG
AGCAACATGACCAAGGAGCAGTTTATGGCGGCGCTTGAGAAGATTAAGTA
TTATATATCGATTGGTGACACTTTTCAGACTGTCTTCTCTCAGAGATTTG
AGCGTTGGAGCAAAATAGATCCTTTCTCGGTATATAGAGCACTGCGAATA
ATCAATCCTTCCCCATACATGATTTATATGCAGTCTCGAGGATGTCATCT
TGTCGCGTCTTCTCCAGAAATCCTGACGCATGTGGAAAGCGGAATCCTCA
CTAACCGTCCACTTGCCGGAACGAGAAGACGAGGAACCTCGAAAGAAGAA
GACGAGTTGCTGATGAAGGAGTTGTTGGCAGATCAGAAAGATCGCTCGGA
GCATATGATGTTGGTGGACCTAGGTCGGAATGACGTCGGGAGAGTCTCGG
AGTATGGAACGGTAAAGCCTGAGAAACTGATGCAAGTGGAGAAATATTCG
CATGTAATGCATATCAGTAGCACAGTGACCGGTAAGTTAAGAAAAGGGTT
GACGTCATGGGATGCTCTGCGATCAACACTCCCAGCTGGTACGATAAGTG
GCGCACCGAAAATCCGTTCGATGCAGATAATAGATGAACTGGAACCTACA
AAAAGAGGACCGTATGGTGGTGGTATTGGATACATCTCTTTCCACGATAC
TATGAATATGGCACTTGCGCTGCGTACTATGGTTGTTCCAAGTGAGACTC
ATATGAATGAAGATGGCCAAAGAGAATGGCAATACTTTTTACAGGCTGGA
GCTGGGATCGTTCATGAATCGGATCCAGAGGCAGAATACACGGAAACTTT
GAACAAGGCTATGGCGCTTAGCAGAGCAATTGACCTAGCTGAAAATGCAT
TCTGTCCTGGGGAGTTGTAA