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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 101852.XP_008081492.1 |
| PFAMs | DUF563 |
| Max annot lvl | 4751|Fungi |
| KEGG rclass | RC00005,RC00059 |
| KEGG ko | ko:K18134 |
| KEGG Reaction | R09304,R09676 |
| KEGG Pathway | ko00514,map00514 |
| Evalue | 6.01e-10 |
| EggNOG OGs | KOG4698@1|root,KOG4698@2759|Eukaryota,38DN6@33154|Opisthokonta,3NTZG@4751|Fungi,3QQZ2@4890|Ascomycota,210E7@147548|Leotiomycetes |
| EC | 2.4.1.255 |
| Description | Protein of unknown function (DUF563) |
| COG category | S |
| CAZy | GT41 |
| BRITE | ko00000,ko00001,ko01000,ko01003 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil654.t1 ID=Gchil654.t1|Name=Gchil654.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=867bp MRFSTTVGTDETPLTSVRRWKIPELSTPSSQTSIPVWERGQTANNYAKKR DDLQTTKTSEIHASSLKSTPPEIARPRSEVRITCPGFQPSPDKNQRDDRL FRGIRRNPLSQRLVGLLMALCIAVGLLGCIMDRLSGELDKIEWELEKRNE MMSAGEQLDASLVSHPFKNPSERRARRLAATKVESISGRLSERHDKLGFW NDIKLRFGTVSRLIEFLNRREDYGTTAALVRTVYKFSETSILPAVTSTNH FTSAASTSAYGANSRSSASSPSKHGPFQNGREGTVISLKAQTFKDVATPV VQTPTSVLQIPKSAWTGSIFSRTVSGNPTSYNLFSSNVGVTNAPQRSTDG TVPSLTRKKDAPCNDSVQTNLSHSRENPLPFPIEGIDQHQLENWSVQENF QSNSSDTFEGFVLWELPRGRSLCRIFGAAKQRDGTLFLPNWMRKHEDILT THCGIKNGMYVFETHSKAQLQRDHSSGKTLFDETFADQDLFSLHTPRHHM PHFLSDIIPPLVATEVILGSGREALPFKCVSRTGRSNSPFSPNFMYDVNP ILFLDLETVSKPPTNWVPSLARFFAHPKIGFHMVPDITSDHSSELRGRDR PLFFRSIMLTNINPYEPYGLFGADGKNRVFTVNGISREPTWTSKGMLKRP CEVSVTVLTRKGHRALLELDELQKVINARFTEQGLDLNFKVVDFTDSCFE DQVRIMQRTNVLIASHGAGNTNIVFLKPGGTVIEVFPFSYKAGPFDGFAK IFGIEYKTAMSAPQTSVFKGCLRRKEKNSAIMKEVFDKWDKAVEEDKFTP WIHRLEFEKEFGEPGKSEGMTTRICARKQQLKFNIHAVAQMALDSGLGQC HFAQMLNQEKSKPYKP* back to topspliced messenger RNA >Gchil654.t1 ID=Gchil654.t1|Name=Gchil654.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2601bp|location=Sequence derived from alignment at tig00004380_pilon:754077..756677+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTTTCAGTACCACCGTTGGAACGGATGAGACGCCATTAACTTCAGT TCGACGATGGAAAATTCCAGAACTCTCAACACCTTCATCACAGACTTCAA TCCCAGTTTGGGAAAGAGGACAAACGGCCAACAACTATGCCAAAAAGCGC GATGACTTGCAAACGACGAAAACATCTGAGATACATGCCTCCTCGTTGAA ATCAACTCCCCCCGAAATTGCTCGCCCAAGGTCTGAAGTAAGAATAACCT GTCCAGGATTTCAACCTTCGCCGGACAAAAACCAGAGGGACGATCGCTTG TTCAGAGGAATACGCCGAAATCCGCTGTCACAAAGACTTGTAGGGCTTTT GATGGCTCTTTGCATCGCGGTTGGACTATTGGGGTGCATCATGGACCGTC TTTCGGGTGAGTTGGACAAGATTGAGTGGGAGCTGGAGAAGAGAAACGAA ATGATGTCTGCCGGAGAACAACTGGACGCCAGCCTCGTTTCGCACCCATT CAAAAATCCCTCTGAAAGAAGAGCTCGGCGGCTTGCAGCAACTAAAGTTG AATCTATAAGCGGTAGACTCTCTGAAAGGCATGACAAACTTGGATTCTGG AACGATATAAAGCTTCGGTTCGGGACAGTTTCTCGCCTTATAGAGTTCCT GAACAGAAGAGAAGATTATGGGACAACTGCTGCTCTTGTGAGGACCGTGT ATAAGTTTTCGGAAACCAGTATCCTGCCAGCTGTGACCAGCACTAATCAT TTCACTTCTGCAGCATCGACATCTGCTTACGGAGCAAATAGTCGTTCTTC GGCCTCAAGCCCGTCTAAACATGGACCATTCCAGAATGGCCGTGAAGGAA CAGTAATATCCCTAAAGGCTCAGACATTTAAGGATGTTGCAACACCAGTA GTACAGACTCCAACGAGTGTGCTCCAAATTCCCAAATCAGCGTGGACAGG ATCTATATTTTCCAGAACTGTGTCAGGGAATCCAACTTCATACAATCTAT TCTCTTCTAATGTGGGAGTCACGAACGCACCGCAAAGATCCACGGATGGT ACTGTGCCCTCACTTACTAGGAAGAAAGACGCGCCTTGCAATGATTCAGT TCAAACCAATCTCTCTCATTCACGGGAAAATCCCCTTCCGTTTCCCATTG AAGGAATCGATCAACATCAGTTGGAAAATTGGTCTGTTCAGGAGAATTTT CAATCCAACTCAAGTGATACGTTTGAGGGGTTTGTTCTCTGGGAGTTGCC GAGGGGGAGATCATTGTGCCGCATCTTCGGTGCCGCAAAACAACGAGATG GTACATTATTCTTACCGAATTGGATGCGAAAGCATGAGGACATCCTGACT ACACACTGTGGGATAAAGAATGGGATGTACGTTTTTGAAACTCATTCGAA GGCCCAGTTGCAAAGGGATCATTCTTCGGGGAAAACTCTTTTTGACGAAA CTTTCGCAGACCAAGATCTCTTCAGTCTTCACACTCCACGGCATCACATG CCTCACTTCTTGTCAGACATAATTCCACCCCTTGTGGCAACAGAAGTCAT TCTTGGTTCTGGTCGAGAAGCGTTGCCTTTCAAGTGTGTTTCACGAACGG GAAGAAGCAATTCTCCTTTTTCTCCCAACTTCATGTACGACGTGAACCCT ATTTTATTCTTAGACTTGGAAACAGTCTCAAAGCCGCCTACAAACTGGGT TCCAAGTCTGGCGAGATTCTTTGCTCATCCGAAGATTGGTTTTCATATGG TTCCAGATATTACGTCAGACCATAGCTCTGAATTGAGAGGACGTGATCGC CCTTTGTTCTTTCGATCTATTATGCTCACAAATATTAATCCGTATGAACC TTACGGGCTTTTTGGGGCTGATGGGAAGAATCGTGTGTTCACTGTGAATG GTATTTCTCGTGAACCTACATGGACTAGCAAAGGGATGCTGAAGAGGCCG TGCGAAGTGTCGGTGACTGTACTCACGAGGAAAGGACATCGAGCTCTTCT TGAACTGGATGAGCTACAGAAGGTCATTAACGCTCGCTTCACCGAGCAAG GATTGGACCTAAATTTCAAAGTAGTAGACTTCACTGATTCCTGCTTTGAA GATCAAGTACGGATAATGCAAAGAACGAATGTTCTGATAGCGAGTCATGG TGCTGGTAATACAAATATTGTGTTTTTGAAACCTGGTGGTACAGTTATTG AAGTGTTCCCGTTTTCGTACAAAGCTGGACCTTTCGACGGATTTGCAAAG ATCTTCGGCATTGAGTACAAAACAGCAATGTCTGCACCTCAAACGAGTGT TTTCAAAGGATGCTTACGCCGGAAAGAAAAAAATTCGGCTATCATGAAGG AGGTTTTTGATAAGTGGGATAAAGCTGTGGAAGAAGACAAGTTTACCCCG TGGATCCATCGACTCGAGTTTGAGAAGGAATTTGGAGAACCCGGAAAGTC CGAGGGCATGACAACAAGAATATGTGCGAGAAAGCAGCAACTGAAATTTA ATATACATGCTGTGGCCCAGATGGCACTTGATTCAGGACTTGGACAATGT CATTTCGCACAGATGCTAAACCAGGAGAAATCTAAACCTTATAAACCTTA A back to topprotein sequence of Gchil654.t1 >Gchil654.t1 ID=Gchil654.t1|Name=Gchil654.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=867bp
MRFSTTVGTDETPLTSVRRWKIPELSTPSSQTSIPVWERGQTANNYAKKR DDLQTTKTSEIHASSLKSTPPEIARPRSEVRITCPGFQPSPDKNQRDDRL FRGIRRNPLSQRLVGLLMALCIAVGLLGCIMDRLSGELDKIEWELEKRNE MMSAGEQLDASLVSHPFKNPSERRARRLAATKVESISGRLSERHDKLGFW NDIKLRFGTVSRLIEFLNRREDYGTTAALVRTVYKFSETSILPAVTSTNH FTSAASTSAYGANSRSSASSPSKHGPFQNGREGTVISLKAQTFKDVATPV VQTPTSVLQIPKSAWTGSIFSRTVSGNPTSYNLFSSNVGVTNAPQRSTDG TVPSLTRKKDAPCNDSVQTNLSHSRENPLPFPIEGIDQHQLENWSVQENF QSNSSDTFEGFVLWELPRGRSLCRIFGAAKQRDGTLFLPNWMRKHEDILT THCGIKNGMYVFETHSKAQLQRDHSSGKTLFDETFADQDLFSLHTPRHHM PHFLSDIIPPLVATEVILGSGREALPFKCVSRTGRSNSPFSPNFMYDVNP ILFLDLETVSKPPTNWVPSLARFFAHPKIGFHMVPDITSDHSSELRGRDR PLFFRSIMLTNINPYEPYGLFGADGKNRVFTVNGISREPTWTSKGMLKRP CEVSVTVLTRKGHRALLELDELQKVINARFTEQGLDLNFKVVDFTDSCFE DQVRIMQRTNVLIASHGAGNTNIVFLKPGGTVIEVFPFSYKAGPFDGFAK IFGIEYKTAMSAPQTSVFKGCLRRKEKNSAIMKEVFDKWDKAVEEDKFTP WIHRLEFEKEFGEPGKSEGMTTRICARKQQLKFNIHAVAQMALDSGLGQC HFAQMLNQEKSKPYKP* back to topmRNA from alignment at tig00004380_pilon:754077..756677+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil654.t1 ID=Gchil654.t1|Name=Gchil654.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2601bp|location=Sequence derived from alignment at tig00004380_pilon:754077..756677+ (Gracilaria chilensis NLEC103_M9 male) ATGCGTTTCAGTACCACCGTTGGAACGGATGAGACGCCATTAACTTCAGT
TCGACGATGGAAAATTCCAGAACTCTCAACACCTTCATCACAGACTTCAA
TCCCAGTTTGGGAAAGAGGACAAACGGCCAACAACTATGCCAAAAAGCGC
GATGACTTGCAAACGACGAAAACATCTGAGATACATGCCTCCTCGTTGAA
ATCAACTCCCCCCGAAATTGCTCGCCCAAGGTCTGAAGTAAGAATAACCT
GTCCAGGATTTCAACCTTCGCCGGACAAAAACCAGAGGGACGATCGCTTG
TTCAGAGGAATACGCCGAAATCCGCTGTCACAAAGACTTGTAGGGCTTTT
GATGGCTCTTTGCATCGCGGTTGGACTATTGGGGTGCATCATGGACCGTC
TTTCGGGTGAGTTGGACAAGATTGAGTGGGAGCTGGAGAAGAGAAACGAA
ATGATGTCTGCCGGAGAACAACTGGACGCCAGCCTCGTTTCGCACCCATT
CAAAAATCCCTCTGAAAGAAGAGCTCGGCGGCTTGCAGCAACTAAAGTTG
AATCTATAAGCGGTAGACTCTCTGAAAGGCATGACAAACTTGGATTCTGG
AACGATATAAAGCTTCGGTTCGGGACAGTTTCTCGCCTTATAGAGTTCCT
GAACAGAAGAGAAGATTATGGGACAACTGCTGCTCTTGTGAGGACCGTGT
ATAAGTTTTCGGAAACCAGTATCCTGCCAGCTGTGACCAGCACTAATCAT
TTCACTTCTGCAGCATCGACATCTGCTTACGGAGCAAATAGTCGTTCTTC
GGCCTCAAGCCCGTCTAAACATGGACCATTCCAGAATGGCCGTGAAGGAA
CAGTAATATCCCTAAAGGCTCAGACATTTAAGGATGTTGCAACACCAGTA
GTACAGACTCCAACGAGTGTGCTCCAAATTCCCAAATCAGCGTGGACAGG
ATCTATATTTTCCAGAACTGTGTCAGGGAATCCAACTTCATACAATCTAT
TCTCTTCTAATGTGGGAGTCACGAACGCACCGCAAAGATCCACGGATGGT
ACTGTGCCCTCACTTACTAGGAAGAAAGACGCGCCTTGCAATGATTCAGT
TCAAACCAATCTCTCTCATTCACGGGAAAATCCCCTTCCGTTTCCCATTG
AAGGAATCGATCAACATCAGTTGGAAAATTGGTCTGTTCAGGAGAATTTT
CAATCCAACTCAAGTGATACGTTTGAGGGGTTTGTTCTCTGGGAGTTGCC
GAGGGGGAGATCATTGTGCCGCATCTTCGGTGCCGCAAAACAACGAGATG
GTACATTATTCTTACCGAATTGGATGCGAAAGCATGAGGACATCCTGACT
ACACACTGTGGGATAAAGAATGGGATGTACGTTTTTGAAACTCATTCGAA
GGCCCAGTTGCAAAGGGATCATTCTTCGGGGAAAACTCTTTTTGACGAAA
CTTTCGCAGACCAAGATCTCTTCAGTCTTCACACTCCACGGCATCACATG
CCTCACTTCTTGTCAGACATAATTCCACCCCTTGTGGCAACAGAAGTCAT
TCTTGGTTCTGGTCGAGAAGCGTTGCCTTTCAAGTGTGTTTCACGAACGG
GAAGAAGCAATTCTCCTTTTTCTCCCAACTTCATGTACGACGTGAACCCT
ATTTTATTCTTAGACTTGGAAACAGTCTCAAAGCCGCCTACAAACTGGGT
TCCAAGTCTGGCGAGATTCTTTGCTCATCCGAAGATTGGTTTTCATATGG
TTCCAGATATTACGTCAGACCATAGCTCTGAATTGAGAGGACGTGATCGC
CCTTTGTTCTTTCGATCTATTATGCTCACAAATATTAATCCGTATGAACC
TTACGGGCTTTTTGGGGCTGATGGGAAGAATCGTGTGTTCACTGTGAATG
GTATTTCTCGTGAACCTACATGGACTAGCAAAGGGATGCTGAAGAGGCCG
TGCGAAGTGTCGGTGACTGTACTCACGAGGAAAGGACATCGAGCTCTTCT
TGAACTGGATGAGCTACAGAAGGTCATTAACGCTCGCTTCACCGAGCAAG
GATTGGACCTAAATTTCAAAGTAGTAGACTTCACTGATTCCTGCTTTGAA
GATCAAGTACGGATAATGCAAAGAACGAATGTTCTGATAGCGAGTCATGG
TGCTGGTAATACAAATATTGTGTTTTTGAAACCTGGTGGTACAGTTATTG
AAGTGTTCCCGTTTTCGTACAAAGCTGGACCTTTCGACGGATTTGCAAAG
ATCTTCGGCATTGAGTACAAAACAGCAATGTCTGCACCTCAAACGAGTGT
TTTCAAAGGATGCTTACGCCGGAAAGAAAAAAATTCGGCTATCATGAAGG
AGGTTTTTGATAAGTGGGATAAAGCTGTGGAAGAAGACAAGTTTACCCCG
TGGATCCATCGACTCGAGTTTGAGAAGGAATTTGGAGAACCCGGAAAGTC
CGAGGGCATGACAACAAGAATATGTGCGAGAAAGCAGCAACTGAAATTTA
ATATACATGCTGTGGCCCAGATGGCACTTGATTCAGGACTTGGACAATGT
CATTTCGCACAGATGCTAAACCAGGAGAAATCTAAACCTTATAAACCTTA
A back to topCoding sequence (CDS) from alignment at tig00004380_pilon:754077..756677+ >Gchil654.t1 ID=Gchil654.t1|Name=Gchil654.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2601bp|location=Sequence derived from alignment at tig00004380_pilon:754077..756677+ (Gracilaria chilensis NLEC103_M9 male) ATGCGTTTCAGTACCACCGTTGGAACGGATGAGACGCCATTAACTTCAGT TCGACGATGGAAAATTCCAGAACTCTCAACACCTTCATCACAGACTTCAA TCCCAGTTTGGGAAAGAGGACAAACGGCCAACAACTATGCCAAAAAGCGC GATGACTTGCAAACGACGAAAACATCTGAGATACATGCCTCCTCGTTGAA ATCAACTCCCCCCGAAATTGCTCGCCCAAGGTCTGAAGTAAGAATAACCT GTCCAGGATTTCAACCTTCGCCGGACAAAAACCAGAGGGACGATCGCTTG TTCAGAGGAATACGCCGAAATCCGCTGTCACAAAGACTTGTAGGGCTTTT GATGGCTCTTTGCATCGCGGTTGGACTATTGGGGTGCATCATGGACCGTC TTTCGGGTGAGTTGGACAAGATTGAGTGGGAGCTGGAGAAGAGAAACGAA ATGATGTCTGCCGGAGAACAACTGGACGCCAGCCTCGTTTCGCACCCATT CAAAAATCCCTCTGAAAGAAGAGCTCGGCGGCTTGCAGCAACTAAAGTTG AATCTATAAGCGGTAGACTCTCTGAAAGGCATGACAAACTTGGATTCTGG AACGATATAAAGCTTCGGTTCGGGACAGTTTCTCGCCTTATAGAGTTCCT GAACAGAAGAGAAGATTATGGGACAACTGCTGCTCTTGTGAGGACCGTGT ATAAGTTTTCGGAAACCAGTATCCTGCCAGCTGTGACCAGCACTAATCAT TTCACTTCTGCAGCATCGACATCTGCTTACGGAGCAAATAGTCGTTCTTC GGCCTCAAGCCCGTCTAAACATGGACCATTCCAGAATGGCCGTGAAGGAA CAGTAATATCCCTAAAGGCTCAGACATTTAAGGATGTTGCAACACCAGTA GTACAGACTCCAACGAGTGTGCTCCAAATTCCCAAATCAGCGTGGACAGG ATCTATATTTTCCAGAACTGTGTCAGGGAATCCAACTTCATACAATCTAT TCTCTTCTAATGTGGGAGTCACGAACGCACCGCAAAGATCCACGGATGGT ACTGTGCCCTCACTTACTAGGAAGAAAGACGCGCCTTGCAATGATTCAGT TCAAACCAATCTCTCTCATTCACGGGAAAATCCCCTTCCGTTTCCCATTG AAGGAATCGATCAACATCAGTTGGAAAATTGGTCTGTTCAGGAGAATTTT CAATCCAACTCAAGTGATACGTTTGAGGGGTTTGTTCTCTGGGAGTTGCC GAGGGGGAGATCATTGTGCCGCATCTTCGGTGCCGCAAAACAACGAGATG GTACATTATTCTTACCGAATTGGATGCGAAAGCATGAGGACATCCTGACT ACACACTGTGGGATAAAGAATGGGATGTACGTTTTTGAAACTCATTCGAA GGCCCAGTTGCAAAGGGATCATTCTTCGGGGAAAACTCTTTTTGACGAAA CTTTCGCAGACCAAGATCTCTTCAGTCTTCACACTCCACGGCATCACATG CCTCACTTCTTGTCAGACATAATTCCACCCCTTGTGGCAACAGAAGTCAT TCTTGGTTCTGGTCGAGAAGCGTTGCCTTTCAAGTGTGTTTCACGAACGG GAAGAAGCAATTCTCCTTTTTCTCCCAACTTCATGTACGACGTGAACCCT ATTTTATTCTTAGACTTGGAAACAGTCTCAAAGCCGCCTACAAACTGGGT TCCAAGTCTGGCGAGATTCTTTGCTCATCCGAAGATTGGTTTTCATATGG TTCCAGATATTACGTCAGACCATAGCTCTGAATTGAGAGGACGTGATCGC CCTTTGTTCTTTCGATCTATTATGCTCACAAATATTAATCCGTATGAACC TTACGGGCTTTTTGGGGCTGATGGGAAGAATCGTGTGTTCACTGTGAATG GTATTTCTCGTGAACCTACATGGACTAGCAAAGGGATGCTGAAGAGGCCG TGCGAAGTGTCGGTGACTGTACTCACGAGGAAAGGACATCGAGCTCTTCT TGAACTGGATGAGCTACAGAAGGTCATTAACGCTCGCTTCACCGAGCAAG GATTGGACCTAAATTTCAAAGTAGTAGACTTCACTGATTCCTGCTTTGAA GATCAAGTACGGATAATGCAAAGAACGAATGTTCTGATAGCGAGTCATGG TGCTGGTAATACAAATATTGTGTTTTTGAAACCTGGTGGTACAGTTATTG AAGTGTTCCCGTTTTCGTACAAAGCTGGACCTTTCGACGGATTTGCAAAG ATCTTCGGCATTGAGTACAAAACAGCAATGTCTGCACCTCAAACGAGTGT TTTCAAAGGATGCTTACGCCGGAAAGAAAAAAATTCGGCTATCATGAAGG AGGTTTTTGATAAGTGGGATAAAGCTGTGGAAGAAGACAAGTTTACCCCG TGGATCCATCGACTCGAGTTTGAGAAGGAATTTGGAGAACCCGGAAAGTC CGAGGGCATGACAACAAGAATATGTGCGAGAAAGCAGCAACTGAAATTTA ATATACATGCTGTGGCCCAGATGGCACTTGATTCAGGACTTGGACAATGT CATTTCGCACAGATGCTAAACCAGGAGAAATCTAAACCTTATAAACCTTA A back to top
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