Gchil634.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil634.t1
Unique NameGchil634.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length408
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:703143..704366 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil634Gchil634Gracilaria chilensis NLEC103_M9 malegenetig00004380_pilon 703143..704366 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil634.t1.start1Gchil634.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004380_pilon 703143..703145 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil634.t1.CDS1Gchil634.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004380_pilon 703143..704366 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil634.t1.exon1Gchil634.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004380_pilon 703143..704366 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil634.t1.stop1Gchil634.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004380_pilon 704364..704366 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil634.t1Gchil634.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004380_pilon 703143..704366 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil634.t1 ID=Gchil634.t1|Name=Gchil634.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=408bp
MPVIHQFLFGPFEAAESMVPHDRPESLSALLQVSAQEMMPVRYGRIFDHS
HNINFRCTPAINVGSVALGYCSVQYLDGDGRKHLHMRYARDDTNGKLLAV
SAPMVDIVELEMVTFHSTRRRTRVNARLDAFTFQQACETEQVEEVIKGLH
AISSSRQWRPCPVCGRNEAMNLDDEGSGDCACALPLSMATEAFDFRNDRA
NMAFQAGRFYGDCVLRVLEEGAVKVEARLVSQMWTRSTTDLTRLMGGQLA
YGGGGGNALTSESAATAALQWAVAAQPSGAGDHDMQAILTACSQAQTTSS
PTLKIHSATINKDGGATVMNERARKLELRKERNRMAAARSNAKRKERTDL
LRDQLHDELQREHQLREREAELRRDNVSLRRLVGGQRSNADVAARLAHVV
AAHQRHD*
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spliced messenger RNA

>Gchil634.t1 ID=Gchil634.t1|Name=Gchil634.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1224bp|location=Sequence derived from alignment at tig00004380_pilon:703143..704366+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGGTCATCCACCAGTTTTTGTTCGGACCTTTCGAAGCTGCTGAATC
GATGGTGCCGCATGACAGACCAGAGAGCCTCAGTGCGCTGTTACAAGTGA
GTGCTCAGGAGATGATGCCGGTTCGATACGGGCGCATTTTCGACCACTCA
CACAACATTAACTTCCGCTGCACGCCTGCCATCAATGTGGGTAGCGTGGC
ACTGGGATACTGCTCTGTGCAATACTTAGACGGTGATGGAAGAAAACATC
TCCATATGCGTTACGCTCGTGACGACACAAACGGAAAATTATTGGCTGTC
AGCGCACCAATGGTTGATATTGTCGAATTAGAGATGGTGACGTTCCATTC
CACACGCAGACGAACAAGGGTGAACGCACGACTTGATGCATTTACTTTTC
AACAAGCTTGTGAAACAGAGCAAGTTGAAGAGGTAATCAAAGGGTTGCAC
GCCATCTCAAGCTCACGTCAGTGGCGACCATGTCCGGTGTGCGGAAGAAA
CGAAGCAATGAACCTGGATGATGAAGGCAGCGGCGACTGCGCTTGTGCAC
TGCCGCTTAGCATGGCAACGGAGGCATTCGACTTTCGAAATGATCGCGCA
AACATGGCATTCCAGGCAGGACGGTTTTACGGTGACTGCGTGTTGCGAGT
GCTTGAAGAGGGTGCAGTGAAGGTGGAGGCGCGGCTGGTTTCGCAGATGT
GGACTAGAAGCACGACAGACTTGACGCGGCTGATGGGCGGACAGCTGGCG
TACGGAGGGGGTGGGGGAAACGCGTTGACAAGCGAGTCGGCGGCAACGGC
GGCGTTACAGTGGGCAGTGGCGGCGCAGCCAAGCGGCGCGGGCGACCACG
ATATGCAAGCTATATTAACGGCATGCTCGCAGGCGCAGACGACGTCGAGC
CCAACACTGAAGATACACAGCGCGACGATCAACAAAGACGGCGGCGCAAC
GGTGATGAACGAGCGCGCCCGCAAGTTGGAGCTTCGAAAGGAACGAAACC
GCATGGCAGCCGCGCGTAGCAACGCAAAACGGAAGGAACGTACTGACTTG
CTCCGCGATCAACTGCATGATGAGCTGCAACGCGAGCATCAGCTTCGTGA
GCGAGAGGCGGAGTTGCGTCGCGATAATGTTAGTCTGCGACGCCTTGTTG
GCGGACAACGCTCCAACGCTGACGTGGCGGCGCGTCTGGCGCACGTGGTT
GCCGCGCACCAGCGCCATGATTGA
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protein sequence of Gchil634.t1

>Gchil634.t1 ID=Gchil634.t1|Name=Gchil634.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=408bp
MPVIHQFLFGPFEAAESMVPHDRPESLSALLQVSAQEMMPVRYGRIFDHS
HNINFRCTPAINVGSVALGYCSVQYLDGDGRKHLHMRYARDDTNGKLLAV
SAPMVDIVELEMVTFHSTRRRTRVNARLDAFTFQQACETEQVEEVIKGLH
AISSSRQWRPCPVCGRNEAMNLDDEGSGDCACALPLSMATEAFDFRNDRA
NMAFQAGRFYGDCVLRVLEEGAVKVEARLVSQMWTRSTTDLTRLMGGQLA
YGGGGGNALTSESAATAALQWAVAAQPSGAGDHDMQAILTACSQAQTTSS
PTLKIHSATINKDGGATVMNERARKLELRKERNRMAAARSNAKRKERTDL
LRDQLHDELQREHQLREREAELRRDNVSLRRLVGGQRSNADVAARLAHVV
AAHQRHD*
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mRNA from alignment at tig00004380_pilon:703143..704366+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil634.t1 ID=Gchil634.t1|Name=Gchil634.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1224bp|location=Sequence derived from alignment at tig00004380_pilon:703143..704366+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCGGTCATCCACCAGTTTTTGTTCGGACCTTTCGAAGCTGCTGAATC
GATGGTGCCGCATGACAGACCAGAGAGCCTCAGTGCGCTGTTACAAGTGA
GTGCTCAGGAGATGATGCCGGTTCGATACGGGCGCATTTTCGACCACTCA
CACAACATTAACTTCCGCTGCACGCCTGCCATCAATGTGGGTAGCGTGGC
ACTGGGATACTGCTCTGTGCAATACTTAGACGGTGATGGAAGAAAACATC
TCCATATGCGTTACGCTCGTGACGACACAAACGGAAAATTATTGGCTGTC
AGCGCACCAATGGTTGATATTGTCGAATTAGAGATGGTGACGTTCCATTC
CACACGCAGACGAACAAGGGTGAACGCACGACTTGATGCATTTACTTTTC
AACAAGCTTGTGAAACAGAGCAAGTTGAAGAGGTAATCAAAGGGTTGCAC
GCCATCTCAAGCTCACGTCAGTGGCGACCATGTCCGGTGTGCGGAAGAAA
CGAAGCAATGAACCTGGATGATGAAGGCAGCGGCGACTGCGCTTGTGCAC
TGCCGCTTAGCATGGCAACGGAGGCATTCGACTTTCGAAATGATCGCGCA
AACATGGCATTCCAGGCAGGACGGTTTTACGGTGACTGCGTGTTGCGAGT
GCTTGAAGAGGGTGCAGTGAAGGTGGAGGCGCGGCTGGTTTCGCAGATGT
GGACTAGAAGCACGACAGACTTGACGCGGCTGATGGGCGGACAGCTGGCG
TACGGAGGGGGTGGGGGAAACGCGTTGACAAGCGAGTCGGCGGCAACGGC
GGCGTTACAGTGGGCAGTGGCGGCGCAGCCAAGCGGCGCGGGCGACCACG
ATATGCAAGCTATATTAACGGCATGCTCGCAGGCGCAGACGACGTCGAGC
CCAACACTGAAGATACACAGCGCGACGATCAACAAAGACGGCGGCGCAAC
GGTGATGAACGAGCGCGCCCGCAAGTTGGAGCTTCGAAAGGAACGAAACC
GCATGGCAGCCGCGCGTAGCAACGCAAAACGGAAGGAACGTACTGACTTG
CTCCGCGATCAACTGCATGATGAGCTGCAACGCGAGCATCAGCTTCGTGA
GCGAGAGGCGGAGTTGCGTCGCGATAATGTTAGTCTGCGACGCCTTGTTG
GCGGACAACGCTCCAACGCTGACGTGGCGGCGCGTCTGGCGCACGTGGTT
GCCGCGCACCAGCGCCATGATTGA
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Coding sequence (CDS) from alignment at tig00004380_pilon:703143..704366+

>Gchil634.t1 ID=Gchil634.t1|Name=Gchil634.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1224bp|location=Sequence derived from alignment at tig00004380_pilon:703143..704366+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCGGTCATCCACCAGTTTTTGTTCGGACCTTTCGAAGCTGCTGAATC
GATGGTGCCGCATGACAGACCAGAGAGCCTCAGTGCGCTGTTACAAGTGA
GTGCTCAGGAGATGATGCCGGTTCGATACGGGCGCATTTTCGACCACTCA
CACAACATTAACTTCCGCTGCACGCCTGCCATCAATGTGGGTAGCGTGGC
ACTGGGATACTGCTCTGTGCAATACTTAGACGGTGATGGAAGAAAACATC
TCCATATGCGTTACGCTCGTGACGACACAAACGGAAAATTATTGGCTGTC
AGCGCACCAATGGTTGATATTGTCGAATTAGAGATGGTGACGTTCCATTC
CACACGCAGACGAACAAGGGTGAACGCACGACTTGATGCATTTACTTTTC
AACAAGCTTGTGAAACAGAGCAAGTTGAAGAGGTAATCAAAGGGTTGCAC
GCCATCTCAAGCTCACGTCAGTGGCGACCATGTCCGGTGTGCGGAAGAAA
CGAAGCAATGAACCTGGATGATGAAGGCAGCGGCGACTGCGCTTGTGCAC
TGCCGCTTAGCATGGCAACGGAGGCATTCGACTTTCGAAATGATCGCGCA
AACATGGCATTCCAGGCAGGACGGTTTTACGGTGACTGCGTGTTGCGAGT
GCTTGAAGAGGGTGCAGTGAAGGTGGAGGCGCGGCTGGTTTCGCAGATGT
GGACTAGAAGCACGACAGACTTGACGCGGCTGATGGGCGGACAGCTGGCG
TACGGAGGGGGTGGGGGAAACGCGTTGACAAGCGAGTCGGCGGCAACGGC
GGCGTTACAGTGGGCAGTGGCGGCGCAGCCAAGCGGCGCGGGCGACCACG
ATATGCAAGCTATATTAACGGCATGCTCGCAGGCGCAGACGACGTCGAGC
CCAACACTGAAGATACACAGCGCGACGATCAACAAAGACGGCGGCGCAAC
GGTGATGAACGAGCGCGCCCGCAAGTTGGAGCTTCGAAAGGAACGAAACC
GCATGGCAGCCGCGCGTAGCAACGCAAAACGGAAGGAACGTACTGACTTG
CTCCGCGATCAACTGCATGATGAGCTGCAACGCGAGCATCAGCTTCGTGA
GCGAGAGGCGGAGTTGCGTCGCGATAATGTTAGTCTGCGACGCCTTGTTG
GCGGACAACGCTCCAACGCTGACGTGGCGGCGCGTCTGGCGCACGTGGTT
GCCGCGCACCAGCGCCATGATTGA
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